RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 IGF1P05019 195 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 NACAE9PAV3 2078 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 TRBV6-8A0A0A6YYG3 113 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 LINC01546A6NGU7 62 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 PRAC2D3DTV9 90 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 ESRGQ1W209 222 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 NTM-AS1Q6ZSK4 140 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 LINC00269Q8N2A0 174 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 ARHGEF17Q96PE2 2063 aaPredicted RBP4.13□□□□□ -1.75
PTPRB-202ENST00000334414 CELA1Q9UNI1 258 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 Q8N814 137 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 TSHBP01222 138 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 APRG1Q8IVJ8 170 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 Q96MF0 132 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 COL5A1P20908 1838 aaPredicted RBP4.13□□□□□ -1.75
PTPRB-202ENST00000334414 SLURP1P55000 103 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 H3BPC8 53 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 C10orf25Q5T742 122 aa4.13□□□□□ -1.75
PTPRB-202ENST00000334414 LY6G6EA0A0G2JKS1 128 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 ZNF295-AS1Q8N0V1 137 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 SMIM11BQ8TCY0 68 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 U3KQA8 63 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 MAPKAPK5-AS1Q8N8E1 139 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 TMEM254Q8TBM7 123 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 COX8CQ7Z4L0 72 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 LINC01561Q8N1V8 128 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 KNL1Q8NG31 2342 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 HIGD2AQ9BW72 106 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 CHCHD7Q9BUK0 85 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 C6orf99Q4VX62 202 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 SERTAD4-AS1Q5TG53 156 aa4.12□□□□□ -1.75
PTPRB-202ENST00000334414 RITA1Q96K30 269 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 KLK12Q9UKR0 248 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 LINC01548A6NM66 108 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 MYO7BQ6PIF6 2116 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 Q6ZQY7 126 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 PHF3Q92576 2039 aaKnown RBP4.11□□□□□ -1.75
PTPRB-202ENST00000334414 KLLNB2CW77 178 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 C3orf84H3BNL1 204 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 DAZAP2Q15038 168 aaPredicted RBP4.11□□□□□ -1.75
PTPRB-202ENST00000334414 FAM19A1Q7Z5A9 133 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 IGHV4-59P01825 116 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 SPRY2O43597 315 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 LINC00322Q6ZN03 302 aaPredicted RBP4.11□□□□□ -1.75
PTPRB-202ENST00000334414 C7orf33Q8WU49 177 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
PTPRB-202ENST00000334414 A8MZ25 164 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 IGLV4-69A0A075B6H9 119 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 CABIN1Q9Y6J0 2220 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 FRMD6-AS1P0C7T7 363 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 PSMG3-AS1Q96PY0 264 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 K7EQG2 157 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 C1orf158Q8N1D5 194 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 FBXL19-AS1Q494R0 122 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 ZFAND3Q9H8U3 227 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 FER1L5A0AVI2 2057 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 LTBP2Q14767 1821 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 CACNA1IQ9P0X4 2223 aa4.1□□□□□ -1.75
PTPRB-202ENST00000334414 HCG22E2RYF7 251 aa4.09□□□□□ -1.75
PTPRB-202ENST00000334414 POLR2KP53803 58 aaKnown RBP4.09□□□□□ -1.75
PTPRB-202ENST00000334414 COL4A4P53420 1690 aaPredicted RBP4.09□□□□□ -1.75
PTPRB-202ENST00000334414 A6NDX4 124 aa4.09□□□□□ -1.75
PTPRB-202ENST00000334414 ERC2-IT1O76042 136 aa4.09□□□□□ -1.75
PTPRB-202ENST00000334414 CRYGDP07320 174 aa4.09□□□□□ -1.75
PTPRB-202ENST00000334414 PLA2G2CQ5R387 149 aa4.09□□□□□ -1.75
PTPRB-202ENST00000334414 Q8N3U1 123 aa4.09□□□□□ -1.75
PTPRB-202ENST00000334414 SCXQ7RTU7 201 aa4.09□□□□□ -1.76
PTPRB-202ENST00000334414 IGIPA6NJ69 53 aa4.09□□□□□ -1.76
PTPRB-202ENST00000334414 KIAA0100Q14667 2235 aaKnown RBP4.09□□□□□ -1.76
PTPRB-202ENST00000334414 LY6HO94772 140 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 NHLRC4P0CG21 123 aaPredicted RBP4.08□□□□□ -1.76
PTPRB-202ENST00000334414 SLPIP03973 132 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 LINC00208Q96KT6 92 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 TANC2Q9HCD6 1990 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 RPL37AP8A6NKH3 93 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 CEMP1Q6PRD7 247 aaPredicted RBP4.08□□□□□ -1.76
PTPRB-202ENST00000334414 DEFB113Q30KQ7 82 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 SMAD5-AS1Q9Y6J3 95 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 SNRNP200O75643 2136 aaKnown RBP4.08□□□□□ -1.76
PTPRB-202ENST00000334414 DIDO1Q9BTC0 2240 aaKnown RBP4.08□□□□□ -1.76
PTPRB-202ENST00000334414 TNFRSF13BO14836 293 aaPredicted RBP4.08□□□□□ -1.76
PTPRB-202ENST00000334414 EGFEM1PQ0D2K5 195 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 Q8N6K4 173 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 ZNF580Q9UK33 172 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 SYCNQ0VAF6 134 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 COL4A3Q01955 1670 aa4.08□□□□□ -1.76
PTPRB-202ENST00000334414 A0A087WZ39 114 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 Q8N7P7 452 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 C8orf87E5RJ46 101 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 E7EUB6 86 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 DEFB136Q30KP8 78 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 UNQ9165/PRO28630Q6UXU0 137 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 LINC01547P58512 204 aaPredicted RBP4.07□□□□□ -1.76
PTPRB-202ENST00000334414 HILS1P60008 231 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 KIAA2026Q5HYC2 2103 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 AMELXQ99217 191 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 PPDPFQ9H3Y8 114 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 F5P12259 2224 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 LY6LH3BQJ8 138 aa4.07□□□□□ -1.76
PTPRB-202ENST00000334414 LELP1Q5T871 98 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms