RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 IGKV2-40A0A087WW87 121 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGKV2D-40P01614 121 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 TNFRSF13BO14836 293 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 AMELXQ99217 191 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGLV1-36A0A0B4J1U3 117 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 C17orf98A8MV24 154 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGHV3-30-3P0DP02 117 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 PLA2G5P39877 138 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 LYPD5Q6UWN5 251 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 ODF3L1Q8IXM7 274 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 BPESC1Q9GZL8 116 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 ZNRD1Q9P1U0 126 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 KLK5Q9Y337 293 aaPredicted RBP4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 COL4A1P02462 1669 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 DEFB105AQ8NG35 78 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 C11orf71Q6IPW1 123 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 WFDC10BQ8IUB3 73 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 MINOS1-NBL1R4GNA1 71 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 APELAP0DMC3 54 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 INSL3P51460 131 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 FAM167A-AS1Q96KT0 104 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 J3QRE1 110 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 Q8N3U1 123 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 LINC00311Q8N616 119 aa4.61□□□□□ -1.67
CDC42BPA-201ENST00000334218 PRO3102Q9H379 93 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 ZNF491Q8N8L2 437 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 C2orf48Q96LS8 159 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 LHFPL6Q9Y693 200 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 Q6ZQT7 251 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 ACANP16112 2415 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 TTC28Q96AY4 2481 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGHV3-20A0A0C4DH32 117 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 X6R8D5 127 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 KRTAP16-1A8MUX0 517 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 Q96MF0 132 aa4.6□□□□□ -1.67
CDC42BPA-201ENST00000334218 LOC101927531A0A1B0GV80 90 aa4.59□□□□□ -1.67
CDC42BPA-201ENST00000334218 LHBP01229 141 aa4.59□□□□□ -1.67
CDC42BPA-201ENST00000334218 C14orf177Q52M58 125 aa4.59□□□□□ -1.67
CDC42BPA-201ENST00000334218 CSNK1G2-AS1Q8NCQ2 148 aa4.59□□□□□ -1.67
CDC42BPA-201ENST00000334218 A8MUN3 132 aa4.59□□□□□ -1.67
CDC42BPA-201ENST00000334218 EFNA2O43921 213 aa4.59□□□□□ -1.67
CDC42BPA-201ENST00000334218 EFNA4P52798 201 aa4.59□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGLV9-49A0A0B4J1Y8 123 aa4.59□□□□□ -1.67
CDC42BPA-201ENST00000334218 MBD6Q96DN6 1003 aa4.59□□□□□ -1.67
CDC42BPA-201ENST00000334218 POLQO75417 2590 aa4.59□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGHV4-59P01825 116 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 CTSGP08311 255 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 LOC100131303A0A0U1RQF7 123 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 C15orf65H3BRN8 121 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 WT1P19544 449 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 LINC01590Q5TEZ4 76 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 H3BUA1 57 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 VMO1Q7Z5L0 202 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 Q8N7P7 452 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 PRB1P04280 392 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 KLKP1Q107X0 134 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 RBM12B-AS1Q9P1G2 102 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGHV3OR16-10A0A075B7F0 116 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 LINC01555Q8NAE3 123 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGLV5-39A0A0G2JS06 123 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 FBXL19-AS1Q494R0 122 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 C2orf91Q6ZV80 131 aa4.58□□□□□ -1.68
CDC42BPA-201ENST00000334218 Q6ZRU5 148 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 LY6HO94772 140 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGKV3-20P01619 116 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 J3QKU1 62 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGHV3-13P01766 116 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 PLA2G2CQ5R387 149 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 TNFRSF12AQ9NP84 129 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 GATA4P43694 442 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 A0A0J9YXV3 536 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 VOPP1Q96AW1 172 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 CHCHD7Q9BUK0 85 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 CDIP1Q9H305 208 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGHV4-31P0DP07 118 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 THSD7BQ9C0I4 1608 aa4.57□□□□□ -1.68
CDC42BPA-201ENST00000334218 PRSS33Q8NF86 280 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 MAP6D1Q9H9H5 199 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 LINC00473A8K010 186 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 RPL39P5Q59GN2 51 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 FAM120AOSQ5T036 256 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 LINC00528Q8N1L1 170 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 C20orf204Q6ZNR8 217 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 MIR7-3HGQ8N6C7 128 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 PLA2G2EQ9NZK7 142 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 NTM-AS1Q6ZSK4 140 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 CYYR1Q96J86 154 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 A0A087WVE0 104 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 Q1T7F1 81 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 Q6ZTC4 211 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 SSBP3-AS1Q7Z2R9 100 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGKV1D-33P01593 117 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 IGKV1-33P01594 117 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 CHTF8P0CG12 524 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 CDSNQ15517 529 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 LINC00308Q8TCZ7 52 aa4.56□□□□□ -1.68
CDC42BPA-201ENST00000334218 C17orf82Q86X59 251 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 UBE2DNLQ8IWF7 75 aa4.55□□□□□ -1.68
CDC42BPA-201ENST00000334218 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms