RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ESM1Q9NQ30 184 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 MYO9AB2RTY4 2548 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 A0A0J9YXY3 114 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 H3BMM0 161 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 NDUFA4O00483 81 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 PROK1P58294 105 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 UBE2WQ96B02 151 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 CENPEQ02224 2701 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 WNK1Q9H4A3 2382 aa5.85□□□□□ -1.47
VMA21-201ENST00000330374 IGHV4OR15-8A0A075B7B6 117 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 A0A087WW49 117 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 GAGE12JA6NER3 117 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 GAGE7O76087 117 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 GAGE12FP0CL80 117 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 GAGE12GP0CL81 117 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 GAGE12IP0CL82 117 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 ADORA2A-AS1P86434 159 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 GAGE4Q13068 117 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 SETD2Q9BYW2 2564 aaPredicted RBP5.84□□□□□ -1.47
VMA21-201ENST00000330374 FAM223BA6NKX1 122 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 IGHV3-30-3P0DP02 117 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 FAM223AQ8IWN6 122 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 TIMM21Q9BVV7 248 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 CELSR2Q9HCU4 2923 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 ADAMTSL4-AS1Q5T5F5 129 aa5.84□□□□□ -1.47
VMA21-201ENST00000330374 ZNF625Q96I27 306 aaPredicted RBP5.84□□□□□ -1.47
VMA21-201ENST00000330374 TRBV27A0A0K0K1C4 114 aa5.84□□□□□ -1.48
VMA21-201ENST00000330374 H3BUX3 64 aa5.84□□□□□ -1.48
VMA21-201ENST00000330374 M0QY20 66 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 IGLV4-3A0A075B6K6 122 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.83□□□□□ -1.48
VMA21-201ENST00000330374 ODF3Q96PU9 254 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 Q9UF83 564 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 POLQO75417 2590 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 M0R2P5 195 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 C20orf203Q8NBC4 194 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 MRAPQ8TCY5 172 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 DAZ1Q9NQZ3 744 aaKnown RBP5.83□□□□□ -1.48
VMA21-201ENST00000330374 IGHV3-38A0A0C4DH36 116 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 MED14OSP0DP75 135 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 NDUFA12Q9UI09 145 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 ICOSQ9Y6W8 199 aa5.83□□□□□ -1.48
VMA21-201ENST00000330374 A0A0B4J2C4 111 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 RNASE1P07998 156 aaKnown RBP5.82□□□□□ -1.48
VMA21-201ENST00000330374 IGHV4-38-2P0DP08 117 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 LMO4P61968 165 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 CHCHD5Q9BSY4 110 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 IGHV3-16A0A0C4DH30 117 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 TRBV10-2A0A0K0K1G8 114 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 RPL35AP18077 110 aaKnown RBP5.82□□□□□ -1.48
VMA21-201ENST00000330374 C10orf99Q6UWK7 81 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 FAM19A4Q96LR4 140 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 USP9XQ93008 2570 aaPredicted RBP5.82□□□□□ -1.48
VMA21-201ENST00000330374 KLLNB2CW77 178 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 TLN2Q9Y4G6 2542 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.82□□□□□ -1.48
VMA21-201ENST00000330374 IGKV2-29A2NJV5 120 aaPredicted RBP5.82□□□□□ -1.48
VMA21-201ENST00000330374 H7C423 109 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 I3L3M4 83 aa5.82□□□□□ -1.48
VMA21-201ENST00000330374 LGALS9O00182 355 aa5.81□□□□□ -1.48
VMA21-201ENST00000330374 COX6CP09669 75 aa5.81□□□□□ -1.48
VMA21-201ENST00000330374 NXPH4O95158 308 aa5.81□□□□□ -1.48
VMA21-201ENST00000330374 MEIG1Q5JSS6 88 aa5.81□□□□□ -1.48
VMA21-201ENST00000330374 PTPN13Q12923 2485 aa5.81□□□□□ -1.48
VMA21-201ENST00000330374 ZANQ9Y493 2812 aa5.81□□□□□ -1.48
VMA21-201ENST00000330374 IGHV1OR15-1A0A075B7D0 117 aa5.8□□□□□ -1.48
VMA21-201ENST00000330374 IGHV1-69P01742 117 aa5.8□□□□□ -1.48
VMA21-201ENST00000330374 RBMY1CP0DJD4 496 aa5.8□□□□□ -1.48
VMA21-201ENST00000330374 TRBV7-9A0A0J9YWB2 115 aa5.8□□□□□ -1.48
VMA21-201ENST00000330374 RHOHQ15669 191 aa5.8□□□□□ -1.48
VMA21-201ENST00000330374 NSUN5P1Q3KNT7 163 aa5.8□□□□□ -1.48
VMA21-201ENST00000330374 POM121L12Q8N7R1 296 aa5.8□□□□□ -1.48
VMA21-201ENST00000330374 K7ENP7 123 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 RPL32P62910 135 aaKnown RBP5.79□□□□□ -1.48
VMA21-201ENST00000330374 FBXL19-AS1Q494R0 122 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 DCANP1Q8TF63 244 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 TNFRSF18Q9Y5U5 241 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 JMJD1CQ15652 2540 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 TRBV6-5A0A0K0K1A5 114 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 TRBV30A0A0K0K1B3 111 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 CCL24O00175 119 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 APRG1Q8IVJ8 170 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 SNRPD3P62318 126 aaKnown RBP5.79□□□□□ -1.48
VMA21-201ENST00000330374 USMG5Q96IX5 58 aa5.79□□□□□ -1.48
VMA21-201ENST00000330374 SYNJ2BPP57105 145 aa5.78□□□□□ -1.48
VMA21-201ENST00000330374 C9orf85Q96MD7 179 aa5.78□□□□□ -1.48
VMA21-201ENST00000330374 LITAFQ99732 161 aa5.78□□□□□ -1.48
VMA21-201ENST00000330374 IGHV1-58A0A0C4DH39 117 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 A0A0J9YX75 114 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 KLK9Q2XQG4 91 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 IGHV4-61A0A0C4DH41 118 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 ITPR1Q14643 2758 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 MIAQ16674 131 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 RS1O15537 224 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 IGHG2P01859 326 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 Q6ZSN1 163 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 CDKN2A-AS1Q9UH64 79 aa5.77□□□□□ -1.49
VMA21-201ENST00000330374 UTP20O75691 2785 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms