RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 IFITM10A6NMD0 228 aa10.59□□□□□ -0.71
PRPF3-201ENST00000324862 HSBP1O75506 76 aa10.59□□□□□ -0.71
PRPF3-201ENST00000324862 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
PRPF3-201ENST00000324862 KIR2DL4Q99706 377 aa10.59□□□□□ -0.71
PRPF3-201ENST00000324862 FCER1GP30273 86 aa10.58□□□□□ -0.72
PRPF3-201ENST00000324862 RPL39P62891 51 aaKnown RBP10.58□□□□□ -0.72
PRPF3-201ENST00000324862 RPL32P62910 135 aaKnown RBP10.58□□□□□ -0.72
PRPF3-201ENST00000324862 LAGE3Q14657 143 aa10.58□□□□□ -0.72
PRPF3-201ENST00000324862 HIST3H2BBQ8N257 126 aa10.58□□□□□ -0.72
PRPF3-201ENST00000324862 BTF3P20290 206 aaKnown RBP10.57□□□□□ -0.72
PRPF3-201ENST00000324862 DAZ4Q86SG3 579 aaKnown RBP10.57□□□□□ -0.72
PRPF3-201ENST00000324862 DAZ3Q9NR90 486 aaKnown RBP10.57□□□□□ -0.72
PRPF3-201ENST00000324862 ICOSQ9Y6W8 199 aa10.57□□□□□ -0.72
PRPF3-201ENST00000324862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.57□□□□□ -0.72
PRPF3-201ENST00000324862 IGKV2-29A2NJV5 120 aaPredicted RBP10.57□□□□□ -0.72
PRPF3-201ENST00000324862 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
PRPF3-201ENST00000324862 CHCHD1Q96BP2 118 aaKnown RBP10.57□□□□□ -0.72
PRPF3-201ENST00000324862 FABP4P15090 132 aa10.56□□□□□ -0.72
PRPF3-201ENST00000324862 AMTP48728 403 aa10.56□□□□□ -0.72
PRPF3-201ENST00000324862 COTL1Q14019 142 aa10.56□□□□□ -0.72
PRPF3-201ENST00000324862 MRPL23Q16540 153 aaKnown RBP10.56□□□□□ -0.72
PRPF3-201ENST00000324862 CHCHD7Q9BUK0 85 aa10.56□□□□□ -0.72
PRPF3-201ENST00000324862 LINC01546A6NGU7 62 aa10.56□□□□□ -0.72
PRPF3-201ENST00000324862 ZFAND6Q6FIF0 208 aa10.56□□□□□ -0.72
PRPF3-201ENST00000324862 CEMP1Q6PRD7 247 aaPredicted RBP10.55□□□□□ -0.72
PRPF3-201ENST00000324862 ESDP10768 282 aa10.55□□□□□ -0.72
PRPF3-201ENST00000324862 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
PRPF3-201ENST00000324862 Q8N3U1 123 aa10.54□□□□□ -0.72
PRPF3-201ENST00000324862 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
PRPF3-201ENST00000324862 TRBV6-8A0A0A6YYG3 113 aa10.53□□□□□ -0.72
PRPF3-201ENST00000324862 H3BNG1 76 aa10.53□□□□□ -0.72
PRPF3-201ENST00000324862 ESRGQ1W209 222 aa10.53□□□□□ -0.72
PRPF3-201ENST00000324862 LYPD5Q6UWN5 251 aa10.53□□□□□ -0.72
PRPF3-201ENST00000324862 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
PRPF3-201ENST00000324862 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
PRPF3-201ENST00000324862 OPRPNQ99935 248 aaPredicted RBP10.53□□□□□ -0.72
PRPF3-201ENST00000324862 HBDP02042 147 aa10.52□□□□□ -0.73
PRPF3-201ENST00000324862 C20orf203Q8NBC4 194 aa10.52□□□□□ -0.73
PRPF3-201ENST00000324862 DNAH1Q9P2D7 4330 aa10.51□□□□□ -0.73
PRPF3-201ENST00000324862 S100A2P29034 98 aa10.51□□□□□ -0.73
PRPF3-201ENST00000324862 GAGE6Q13070 117 aa10.5□□□□□ -0.73
PRPF3-201ENST00000324862 RNASE13Q5GAN3 156 aaKnown RBP10.5□□□□□ -0.73
PRPF3-201ENST00000324862 ZC2HC1BQ5TFG8 222 aa10.5□□□□□ -0.73
PRPF3-201ENST00000324862 CHCHD5Q9BSY4 110 aa10.5□□□□□ -0.73
PRPF3-201ENST00000324862 TRBV25-1A0A075B6N4 114 aa10.49□□□□□ -0.73
PRPF3-201ENST00000324862 TOMM6Q96B49 74 aa10.49□□□□□ -0.73
PRPF3-201ENST00000324862 K7EMI3 77 aa10.49□□□□□ -0.73
PRPF3-201ENST00000324862 LEPROTL1O95214 131 aa10.49□□□□□ -0.73
PRPF3-201ENST00000324862 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
PRPF3-201ENST00000324862 H0Y8G0 127 aa10.48□□□□□ -0.73
PRPF3-201ENST00000324862 Q8N976 141 aa10.48□□□□□ -0.73
PRPF3-201ENST00000324862 FAM104AQ969W3 186 aa10.48□□□□□ -0.73
PRPF3-201ENST00000324862 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
PRPF3-201ENST00000324862 APLNQ9ULZ1 77 aa10.48□□□□□ -0.73
PRPF3-201ENST00000324862 WFDC10BQ8IUB3 73 aa10.48□□□□□ -0.73
PRPF3-201ENST00000324862 C15orf53Q8NAA6 179 aa10.47□□□□□ -0.73
PRPF3-201ENST00000324862 TMEM18Q96B42 140 aa10.47□□□□□ -0.73
PRPF3-201ENST00000324862 UBE2D4Q9Y2X8 147 aa10.47□□□□□ -0.73
PRPF3-201ENST00000324862 IGIPA6NJ69 53 aa10.47□□□□□ -0.73
PRPF3-201ENST00000324862 MUC7Q8TAX7 377 aa10.47□□□□□ -0.73
PRPF3-201ENST00000324862 PACRGQ96M98 296 aaPredicted RBP10.47□□□□□ -0.73
PRPF3-201ENST00000324862 SCGB3A1Q96QR1 104 aa10.47□□□□□ -0.73
PRPF3-201ENST00000324862 LINC00588Q9Y4M8 146 aa10.47□□□□□ -0.73
PRPF3-201ENST00000324862 NUPR2A6NF83 97 aa10.46□□□□□ -0.73
PRPF3-201ENST00000324862 TMEM262E9PQX1 116 aa10.46□□□□□ -0.73
PRPF3-201ENST00000324862 FGF6P10767 208 aa10.46□□□□□ -0.73
PRPF3-201ENST00000324862 MPV17L2Q567V2 206 aa10.46□□□□□ -0.73
PRPF3-201ENST00000324862 OR10D4PQ8NGN7 298 aa10.46□□□□□ -0.73
PRPF3-201ENST00000324862 IGLV4-60A0A075B6I1 120 aa10.46□□□□□ -0.74
PRPF3-201ENST00000324862 LELP1Q5T871 98 aa10.46□□□□□ -0.74
PRPF3-201ENST00000324862 SH2D6Q7Z4S9 175 aa10.46□□□□□ -0.74
PRPF3-201ENST00000324862 SPATA12Q7Z6I5 190 aa10.46□□□□□ -0.74
PRPF3-201ENST00000324862 WWC2-AS2Q96NR7 200 aa10.46□□□□□ -0.74
PRPF3-201ENST00000324862 LOC105371267A0A1B0GV96 52 aa10.45□□□□□ -0.74
PRPF3-201ENST00000324862 UBE2L6O14933 153 aa10.45□□□□□ -0.74
PRPF3-201ENST00000324862 KRTDAPP60985 99 aa10.44□□□□□ -0.74
PRPF3-201ENST00000324862 Q6ZUT4 128 aa10.44□□□□□ -0.74
PRPF3-201ENST00000324862 C3orf79P0CE67 100 aa10.44□□□□□ -0.74
PRPF3-201ENST00000324862 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
PRPF3-201ENST00000324862 PMCHL2Q9BQD1 86 aa10.44□□□□□ -0.74
PRPF3-201ENST00000324862 ERASQ7Z444 233 aa10.43□□□□□ -0.74
PRPF3-201ENST00000324862 KLK5Q9Y337 293 aaPredicted RBP10.43□□□□□ -0.74
PRPF3-201ENST00000324862 IGLV4-3A0A075B6K6 122 aa10.43□□□□□ -0.74
PRPF3-201ENST00000324862 AKR1D1P51857 326 aa10.43□□□□□ -0.74
PRPF3-201ENST00000324862 TMEM97Q5BJF2 176 aa10.43□□□□□ -0.74
PRPF3-201ENST00000324862 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 IGHV3-33P01772 117 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 IGHV3-30-3P0DP02 117 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 RBX1P62877 108 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 AMMECR1LQ6DCA0 310 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 CLPSL2Q6UWE3 100 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 VPS13DQ5THJ4 4388 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.42□□□□□ -0.74
PRPF3-201ENST00000324862 HSPB8Q9UJY1 196 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 KMT2AQ03164 3969 aa10.42□□□□□ -0.74
PRPF3-201ENST00000324862 CCL18P55774 89 aa10.41□□□□□ -0.74
PRPF3-201ENST00000324862 DGAT2L7PQ6IED9 249 aa10.41□□□□□ -0.74
PRPF3-201ENST00000324862 IGKV3OR2-268A0A0C4DH90 116 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms