RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 NEGR1Q7Z3B1 354 aa16.67■□□□□ 0.26
TNFSF12-202ENST00000322272 SLC25A29Q8N8R3 303 aa16.67■□□□□ 0.26
TNFSF12-202ENST00000322272 SMIM6P0DI80 62 aa16.66■□□□□ 0.26
TNFSF12-202ENST00000322272 TRAV10A0A0B4J240 114 aa16.65■□□□□ 0.26
TNFSF12-202ENST00000322272 NUDT3O95989 172 aa16.65■□□□□ 0.26
TNFSF12-202ENST00000322272 ATP5G1P05496 136 aa16.65■□□□□ 0.26
TNFSF12-202ENST00000322272 RHOHQ15669 191 aa16.65■□□□□ 0.26
TNFSF12-202ENST00000322272 RPL36AP83881 106 aaKnown RBP16.64■□□□□ 0.25
TNFSF12-202ENST00000322272 RPL36ALQ969Q0 106 aaKnown RBP16.64■□□□□ 0.25
TNFSF12-202ENST00000322272 TRBV7-3A0A075B6L6 115 aa16.63■□□□□ 0.25
TNFSF12-202ENST00000322272 G0S2P27469 103 aa16.63■□□□□ 0.25
TNFSF12-202ENST00000322272 HYDINQ4G0P3 5121 aa16.63■□□□□ 0.25
TNFSF12-202ENST00000322272 IGLL5B9A064 214 aa16.63■□□□□ 0.25
TNFSF12-202ENST00000322272 BTF3P20290 206 aaKnown RBP16.63■□□□□ 0.25
TNFSF12-202ENST00000322272 KRTDAPP60985 99 aa16.63■□□□□ 0.25
TNFSF12-202ENST00000322272 PRADC1Q9BSG0 188 aa16.63■□□□□ 0.25
TNFSF12-202ENST00000322272 Q9UF83 564 aa16.63■□□□□ 0.25
TNFSF12-202ENST00000322272 JOSD1Q15040 202 aaPredicted RBP16.62■□□□□ 0.25
TNFSF12-202ENST00000322272 LINC00476Q8WZB0 136 aa16.62■□□□□ 0.25
TNFSF12-202ENST00000322272 DEFB131BA0A096LNP1 70 aa16.61■□□□□ 0.25
TNFSF12-202ENST00000322272 HTN3P15516 51 aa16.61■□□□□ 0.25
TNFSF12-202ENST00000322272 ZNRF2Q8NHG8 242 aa16.61■□□□□ 0.25
TNFSF12-202ENST00000322272 ALMS1Q8TCU4 4167 aa16.61■□□□□ 0.25
TNFSF12-202ENST00000322272 LY6G6CO95867 125 aa16.6■□□□□ 0.25
TNFSF12-202ENST00000322272 TSHBP01222 138 aa16.6■□□□□ 0.25
TNFSF12-202ENST00000322272 C3orf79P0CE67 100 aa16.6■□□□□ 0.25
TNFSF12-202ENST00000322272 PYY3Q5JQD4 70 aa16.6■□□□□ 0.25
TNFSF12-202ENST00000322272 MAP1LC3CQ9BXW4 147 aa16.6■□□□□ 0.25
TNFSF12-202ENST00000322272 HHLA3Q9XRX5 114 aa16.6■□□□□ 0.25
TNFSF12-202ENST00000322272 LINC01549A6NIU2 74 aa16.59■□□□□ 0.25
TNFSF12-202ENST00000322272 LINC00173Q6ZV60 143 aa16.59■□□□□ 0.25
TNFSF12-202ENST00000322272 DNAH1Q9P2D7 4330 aa16.59■□□□□ 0.25
TNFSF12-202ENST00000322272 PRO0255Q9UI72 69 aa16.59■□□□□ 0.25
TNFSF12-202ENST00000322272 GAGE12JA6NER3 117 aa16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 F5H768 121 aa16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 UBE2D3P61077 147 aa16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 UBE2D2P62837 147 aa16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 GAGE1Q13065 139 aa16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 GAGE4Q13068 117 aa16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 GAGE5Q13069 117 aa16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 GAGE13Q4V321 117 aa16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 DAZ4Q86SG3 579 aaKnown RBP16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 DAZ3Q9NR90 486 aaKnown RBP16.58■□□□□ 0.24
TNFSF12-202ENST00000322272 CRYBA4P53673 196 aa16.57■□□□□ 0.24
TNFSF12-202ENST00000322272 C2orf66Q6UXQ4 117 aa16.57■□□□□ 0.24
TNFSF12-202ENST00000322272 TOMM6Q96B49 74 aa16.57■□□□□ 0.24
TNFSF12-202ENST00000322272 CYSLTR1Q9Y271 337 aa16.57■□□□□ 0.24
TNFSF12-202ENST00000322272 ATP5LO75964 103 aa16.56■□□□□ 0.24
TNFSF12-202ENST00000322272 SCGB1D1O95968 90 aa16.56■□□□□ 0.24
TNFSF12-202ENST00000322272 TCTAP57738 103 aa16.56■□□□□ 0.24
TNFSF12-202ENST00000322272 COTL1Q14019 142 aa16.56■□□□□ 0.24
TNFSF12-202ENST00000322272 IFI27L1Q96BM0 104 aa16.56■□□□□ 0.24
TNFSF12-202ENST00000322272 APLNQ9ULZ1 77 aa16.56■□□□□ 0.24
TNFSF12-202ENST00000322272 SYS1-DBNDD2H3BUS1 97 aa16.55■□□□□ 0.24
TNFSF12-202ENST00000322272 LINC00518Q8N0U6 118 aa16.55■□□□□ 0.24
TNFSF12-202ENST00000322272 DEFB104AQ8WTQ1 72 aa16.55■□□□□ 0.24
TNFSF12-202ENST00000322272 IGHV3-38A0A0C4DH36 116 aa16.54■□□□□ 0.24
TNFSF12-202ENST00000322272 LOC100131303A0A0U1RQF7 123 aa16.54■□□□□ 0.24
TNFSF12-202ENST00000322272 C12orf57Q99622 126 aa16.54■□□□□ 0.24
TNFSF12-202ENST00000322272 LINC00694P0DN24 101 aa16.53■□□□□ 0.24
TNFSF12-202ENST00000322272 PET117Q6UWS5 81 aa16.53■□□□□ 0.24
TNFSF12-202ENST00000322272 C20orf202A1L168 122 aa16.52■□□□□ 0.24
TNFSF12-202ENST00000322272 LGALS9CQ6DKI2 356 aa16.52■□□□□ 0.24
TNFSF12-202ENST00000322272 PAX4O43316 350 aa16.52■□□□□ 0.23
TNFSF12-202ENST00000322272 C20orf203Q8NBC4 194 aa16.52■□□□□ 0.23
TNFSF12-202ENST00000322272 SCGB3A1Q96QR1 104 aa16.52■□□□□ 0.23
TNFSF12-202ENST00000322272 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.51■□□□□ 0.23
TNFSF12-202ENST00000322272 GYPEP15421 78 aa16.51■□□□□ 0.23
TNFSF12-202ENST00000322272 SPATA12Q7Z6I5 190 aa16.51■□□□□ 0.23
TNFSF12-202ENST00000322272 ERASQ7Z444 233 aa16.5■□□□□ 0.23
TNFSF12-202ENST00000322272 Q8N976 141 aa16.49■□□□□ 0.23
TNFSF12-202ENST00000322272 TRAV26-1A0A087WT03 109 aa16.48■□□□□ 0.23
TNFSF12-202ENST00000322272 H0Y8G0 127 aa16.48■□□□□ 0.23
TNFSF12-202ENST00000322272 RPL39P62891 51 aaKnown RBP16.48■□□□□ 0.23
TNFSF12-202ENST00000322272 A0A0J9YY99 117 aa16.48■□□□□ 0.23
TNFSF12-202ENST00000322272 Q6ZN92 141 aa16.48■□□□□ 0.23
TNFSF12-202ENST00000322272 TIMM17AQ99595 171 aa16.48■□□□□ 0.23
TNFSF12-202ENST00000322272 CHCHD7Q9BUK0 85 aa16.48■□□□□ 0.23
TNFSF12-202ENST00000322272 GTSF1LQ9H1H1 148 aa16.48■□□□□ 0.23
TNFSF12-202ENST00000322272 TMEM97Q5BJF2 176 aa16.47■□□□□ 0.23
TNFSF12-202ENST00000322272 TMEM141Q96I45 108 aa16.47■□□□□ 0.23
TNFSF12-202ENST00000322272 VSIG2Q96IQ7 327 aa16.47■□□□□ 0.23
TNFSF12-202ENST00000322272 LINC01545Q5VT33 79 aa16.46■□□□□ 0.23
TNFSF12-202ENST00000322272 PRSS1P07477 247 aa16.45■□□□□ 0.22
TNFSF12-202ENST00000322272 IGIPA6NJ69 53 aa16.45■□□□□ 0.22
TNFSF12-202ENST00000322272 CDPF1Q6NVV7 123 aa16.45■□□□□ 0.22
TNFSF12-202ENST00000322272 ATP6V0E2Q8NHE4 81 aa16.44■□□□□ 0.22
TNFSF12-202ENST00000322272 S100A12P80511 92 aa16.43■□□□□ 0.22
TNFSF12-202ENST00000322272 NTM-AS1Q6ZSK4 140 aa16.43■□□□□ 0.22
TNFSF12-202ENST00000322272 TRBV25-1A0A075B6N4 114 aa16.42■□□□□ 0.22
TNFSF12-202ENST00000322272 H3BNG1 76 aa16.42■□□□□ 0.22
TNFSF12-202ENST00000322272 TEX43Q6ZNM6 134 aa16.42■□□□□ 0.22
TNFSF12-202ENST00000322272 PYGO1Q9Y3Y4 419 aa16.42■□□□□ 0.22
TNFSF12-202ENST00000322272 ICOSQ9Y6W8 199 aa16.42■□□□□ 0.22
TNFSF12-202ENST00000322272 KMT2AQ03164 3969 aa16.42■□□□□ 0.22
TNFSF12-202ENST00000322272 BAALCQ8WXS3 180 aa16.41■□□□□ 0.22
TNFSF12-202ENST00000322272 SPANXA1Q9NS26 97 aa16.41■□□□□ 0.22
TNFSF12-202ENST00000322272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.41■□□□□ 0.22
TNFSF12-202ENST00000322272 TRAV12-1A0A0B4J245 112 aa16.41■□□□□ 0.22
TNFSF12-202ENST00000322272 IGKV2-29A2NJV5 120 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms