RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 LINC01546A6NGU7 62 aa19.08■□□□□ 0.64
CTDNEP1-201ENST00000318988 LINC00310P59036 64 aa19.07■□□□□ 0.64
CTDNEP1-201ENST00000318988 GTSF1LQ9H1H1 148 aa19.07■□□□□ 0.64
CTDNEP1-201ENST00000318988 NUPR2A6NF83 97 aa19.06■□□□□ 0.64
CTDNEP1-201ENST00000318988 G0S2P27469 103 aa19.06■□□□□ 0.64
CTDNEP1-201ENST00000318988 SNRPEP62304 92 aaKnown RBP19.06■□□□□ 0.64
CTDNEP1-201ENST00000318988 CEMP1Q6PRD7 247 aaPredicted RBP19.06■□□□□ 0.64
CTDNEP1-201ENST00000318988 NUPR1O60356 82 aa19.05■□□□□ 0.64
CTDNEP1-201ENST00000318988 AMTP48728 403 aa19.05■□□□□ 0.64
CTDNEP1-201ENST00000318988 KLK5Q9Y337 293 aaPredicted RBP19.05■□□□□ 0.64
CTDNEP1-201ENST00000318988 ESDP10768 282 aa19.04■□□□□ 0.64
CTDNEP1-201ENST00000318988 BTF3P20290 206 aaKnown RBP19.04■□□□□ 0.64
CTDNEP1-201ENST00000318988 IGHV1-24A0A0C4DH33 117 aa19.03■□□□□ 0.64
CTDNEP1-201ENST00000318988 PMCHL1Q16048 86 aa19.03■□□□□ 0.64
CTDNEP1-201ENST00000318988 PDZD11Q5EBL8 140 aa19.03■□□□□ 0.64
CTDNEP1-201ENST00000318988 TRBV25-1A0A075B6N4 114 aa19.02■□□□□ 0.64
CTDNEP1-201ENST00000318988 S100A2P29034 98 aa19.02■□□□□ 0.64
CTDNEP1-201ENST00000318988 FAM19A2Q8N3H0 131 aa19.02■□□□□ 0.64
CTDNEP1-201ENST00000318988 TRBV6-8A0A0A6YYG3 113 aa19.01■□□□□ 0.63
CTDNEP1-201ENST00000318988 C5orf52A6NGY3 159 aa19.01■□□□□ 0.63
CTDNEP1-201ENST00000318988 NTM-AS1Q6ZSK4 140 aa19.01■□□□□ 0.63
CTDNEP1-201ENST00000318988 HBDP02042 147 aa19■□□□□ 0.63
CTDNEP1-201ENST00000318988 TMEM18Q96B42 140 aa19■□□□□ 0.63
CTDNEP1-201ENST00000318988 WWC2-AS2Q96NR7 200 aa19■□□□□ 0.63
CTDNEP1-201ENST00000318988 TMEM243Q9BU79 118 aa19■□□□□ 0.63
CTDNEP1-201ENST00000318988 CYSLTR1Q9Y271 337 aa18.99■□□□□ 0.63
CTDNEP1-201ENST00000318988 UBE2L6O14933 153 aa18.98■□□□□ 0.63
CTDNEP1-201ENST00000318988 LYPD5Q6UWN5 251 aa18.98■□□□□ 0.63
CTDNEP1-201ENST00000318988 HIST3H2BBQ8N257 126 aa18.98■□□□□ 0.63
CTDNEP1-201ENST00000318988 CHCHD7Q9BUK0 85 aa18.98■□□□□ 0.63
CTDNEP1-201ENST00000318988 LINC01549A6NIU2 74 aa18.97■□□□□ 0.63
CTDNEP1-201ENST00000318988 C2orf66Q6UXQ4 117 aa18.97■□□□□ 0.63
CTDNEP1-201ENST00000318988 C20orf203Q8NBC4 194 aa18.97■□□□□ 0.63
CTDNEP1-201ENST00000318988 TIRAPP58753 221 aa18.96■□□□□ 0.63
CTDNEP1-201ENST00000318988 CHCHD5Q9BSY4 110 aa18.96■□□□□ 0.63
CTDNEP1-201ENST00000318988 LELP1Q5T871 98 aa18.95■□□□□ 0.62
CTDNEP1-201ENST00000318988 MUC7Q8TAX7 377 aa18.95■□□□□ 0.62
CTDNEP1-201ENST00000318988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.95■□□□□ 0.62
CTDNEP1-201ENST00000318988 IGKV2-29A2NJV5 120 aaPredicted RBP18.95■□□□□ 0.62
CTDNEP1-201ENST00000318988 TOMM6Q96B49 74 aa18.95■□□□□ 0.62
CTDNEP1-201ENST00000318988 SMAGPQ0VAQ4 97 aa18.94■□□□□ 0.62
CTDNEP1-201ENST00000318988 ZFAND6Q6FIF0 208 aa18.94■□□□□ 0.62
CTDNEP1-201ENST00000318988 A0A096LNJ9 63 aa18.93■□□□□ 0.62
CTDNEP1-201ENST00000318988 TCTAP57738 103 aa18.93■□□□□ 0.62
CTDNEP1-201ENST00000318988 RPL39P62891 51 aaKnown RBP18.93■□□□□ 0.62
CTDNEP1-201ENST00000318988 TRAV8-6A0A0B4J262 113 aa18.92■□□□□ 0.62
CTDNEP1-201ENST00000318988 LEPROTL1O95214 131 aa18.92■□□□□ 0.62
CTDNEP1-201ENST00000318988 FABP4P15090 132 aa18.92■□□□□ 0.62
CTDNEP1-201ENST00000318988 ESRGQ1W209 222 aa18.92■□□□□ 0.62
CTDNEP1-201ENST00000318988 H7C423 109 aa18.91■□□□□ 0.62
CTDNEP1-201ENST00000318988 CCL18P55774 89 aa18.91■□□□□ 0.62
CTDNEP1-201ENST00000318988 SCGB3A1Q96QR1 104 aa18.91■□□□□ 0.62
CTDNEP1-201ENST00000318988 HSPB8Q9UJY1 196 aa18.91■□□□□ 0.62
CTDNEP1-201ENST00000318988 PACRGQ96M98 296 aaPredicted RBP18.9■□□□□ 0.62
CTDNEP1-201ENST00000318988 APLNQ9ULZ1 77 aa18.9■□□□□ 0.62
CTDNEP1-201ENST00000318988 GAGE6Q13070 117 aa18.9■□□□□ 0.62
CTDNEP1-201ENST00000318988 AMMECR1LQ6DCA0 310 aa18.9■□□□□ 0.62
CTDNEP1-201ENST00000318988 TMEM262E9PQX1 116 aa18.89■□□□□ 0.61
CTDNEP1-201ENST00000318988 HIST1H2BLQ99880 126 aa18.89■□□□□ 0.61
CTDNEP1-201ENST00000318988 ATP5LO75964 103 aa18.88■□□□□ 0.61
CTDNEP1-201ENST00000318988 PKIAP61925 76 aa18.88■□□□□ 0.61
CTDNEP1-201ENST00000318988 DGAT2L7PQ6IED9 249 aa18.88■□□□□ 0.61
CTDNEP1-201ENST00000318988 FGF6P10767 208 aa18.87■□□□□ 0.61
CTDNEP1-201ENST00000318988 ERASQ7Z444 233 aa18.87■□□□□ 0.61
CTDNEP1-201ENST00000318988 SPANXA1Q9NS26 97 aa18.87■□□□□ 0.61
CTDNEP1-201ENST00000318988 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.86■□□□□ 0.61
CTDNEP1-201ENST00000318988 TMEM101Q96IK0 257 aa18.86■□□□□ 0.61
CTDNEP1-201ENST00000318988 UBE2D4Q9Y2X8 147 aa18.85■□□□□ 0.61
CTDNEP1-201ENST00000318988 TMEM141Q96I45 108 aa18.84■□□□□ 0.61
CTDNEP1-201ENST00000318988 TIMM17AQ99595 171 aa18.84■□□□□ 0.61
CTDNEP1-201ENST00000318988 TIMM21Q9BVV7 248 aa18.84■□□□□ 0.61
CTDNEP1-201ENST00000318988 PYGO1Q9Y3Y4 419 aa18.84■□□□□ 0.61
CTDNEP1-201ENST00000318988 TGP01266 2768 aa18.84■□□□□ 0.61
CTDNEP1-201ENST00000318988 MRPL52Q86TS9 123 aaKnown RBP18.84■□□□□ 0.61
CTDNEP1-201ENST00000318988 IFI27L1Q96BM0 104 aa18.84■□□□□ 0.61
CTDNEP1-201ENST00000318988 A0A087WX48 190 aa18.83■□□□□ 0.6
CTDNEP1-201ENST00000318988 IFITM10A6NMD0 228 aa18.83■□□□□ 0.6
CTDNEP1-201ENST00000318988 ZNF25P17030 456 aaPredicted RBP18.83■□□□□ 0.6
CTDNEP1-201ENST00000318988 OR5A1Q8NGJ0 315 aa18.83■□□□□ 0.6
CTDNEP1-201ENST00000318988 DNAH7Q8WXX0 4024 aa18.82■□□□□ 0.6
CTDNEP1-201ENST00000318988 IGIPA6NJ69 53 aa18.82■□□□□ 0.6
CTDNEP1-201ENST00000318988 Q6ZN92 141 aa18.82■□□□□ 0.6
CTDNEP1-201ENST00000318988 MRPS16Q9Y3D3 137 aaKnown RBP18.82■□□□□ 0.6
CTDNEP1-201ENST00000318988 LINC00588Q9Y4M8 146 aa18.82■□□□□ 0.6
CTDNEP1-201ENST00000318988 PAPPA-AS1Q5QFB9 102 aa18.81■□□□□ 0.6
CTDNEP1-201ENST00000318988 LINC00173Q6ZV60 143 aa18.81■□□□□ 0.6
CTDNEP1-201ENST00000318988 UBE2DNLQ8IWF7 75 aa18.81■□□□□ 0.6
CTDNEP1-201ENST00000318988 MAP1LC3CQ9BXW4 147 aa18.81■□□□□ 0.6
CTDNEP1-201ENST00000318988 CSDC2Q9Y534 153 aaKnown RBP18.8■□□□□ 0.6
CTDNEP1-201ENST00000318988 NPSP0C0P6 89 aa18.79■□□□□ 0.6
CTDNEP1-201ENST00000318988 PRSS1P07477 247 aa18.79■□□□□ 0.6
CTDNEP1-201ENST00000318988 WFDC10BQ8IUB3 73 aa18.79■□□□□ 0.6
CTDNEP1-201ENST00000318988 C3orf84H3BNL1 204 aa18.78■□□□□ 0.6
CTDNEP1-201ENST00000318988 A0A1B0GUV1 79 aa18.77■□□□□ 0.6
CTDNEP1-201ENST00000318988 KRTDAPP60985 99 aa18.77■□□□□ 0.6
CTDNEP1-201ENST00000318988 RBX1P62877 108 aa18.77■□□□□ 0.6
CTDNEP1-201ENST00000318988 MPV17L2Q567V2 206 aa18.77■□□□□ 0.6
CTDNEP1-201ENST00000318988 OR10D4PQ8NGN7 298 aa18.77■□□□□ 0.6
CTDNEP1-201ENST00000318988 IGLV4-3A0A075B6K6 122 aa18.76■□□□□ 0.59
CTDNEP1-201ENST00000318988 H0Y8G0 127 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms