RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 BSNQ9UPA5 3926 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 CSMD1Q96PZ7 3565 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 BAALC-AS2P0C853 105 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 DEFB131AP59861 70 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 TRBV10-2A0A0K0K1G8 114 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 IGHV3-33P01772 117 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 CFAP161Q6P656 301 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 Q8N9W7 124 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 C20orf173Q96LM9 149 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 TRGV2A0A075B6R0 118 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 TRBV6-1A0A0K0K1D8 114 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 PRM2P04554 102 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 TSPEAR-AS2P59090 65 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 LEPROTO15243 131 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 NXPH4O95158 308 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 IGHV3-30-3P0DP02 117 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 MINOS1Q5TGZ0 78 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 DAZ1Q9NQZ3 744 aaKnown RBP5.69□□□□□ -1.5
CDHR3-201ENST00000317716 XCL2Q9UBD3 114 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 BLCAPP62952 87 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 SLC25A29Q8N8R3 303 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 LINC00574Q9H8X3 128 aa5.69□□□□□ -1.5
CDHR3-201ENST00000317716 KLK5Q9Y337 293 aaPredicted RBP5.69□□□□□ -1.5
CDHR3-201ENST00000317716 CRYGBP07316 175 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 ZNRF2Q8NHG8 242 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 PIMREGQ9BSJ6 248 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 MINOS1-NBL1R4GNA1 71 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 IGHV1OR15-1A0A075B7D0 117 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 IGHV7-4-1A0A0J9YVY3 117 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 LGALS9O00182 355 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 RHODO00212 210 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 ZNF22P17026 224 aaPredicted RBP5.68□□□□□ -1.5
CDHR3-201ENST00000317716 CCDC140Q96MF4 163 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 A0A0J9YXY3 114 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 A0A1W2PPR1 153 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 IGHV3-30P01768 117 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 IGHV3-30-5P0DP03 117 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 ZFP36P26651 326 aaKnown RBP5.68□□□□□ -1.5
CDHR3-201ENST00000317716 RHOHQ15669 191 aa5.68□□□□□ -1.5
CDHR3-201ENST00000317716 A0A1B0GX51 115 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 PROK1P58294 105 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 HIST2H2BDQ6DRA6 164 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 C8orf31Q8N9H6 132 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 TMEM126AQ9H061 195 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 APCP25054 2843 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 OOSP1A8MZH6 123 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 RNF223E7ERA6 249 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 SVEP1Q4LDE5 3571 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 CSMD2Q7Z408 3487 aa5.67□□□□□ -1.5
CDHR3-201ENST00000317716 SDIM1Q6ZPB5 146 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 C9orf47Q6ZRZ4 202 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 PIFOQ8TCI5 191 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 PRO0461Q9UI25 63 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 HRNRQ86YZ3 2850 aaPredicted RBP5.66□□□□□ -1.5
CDHR3-201ENST00000317716 IGHV1-69DA0A0B4J2H0 117 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 M0QXV9 152 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 TRACP01848 142 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 ATP5G1P05496 136 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 FHL3Q13643 280 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 DEFB136Q30KP8 78 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 NSUN5P1Q3KNT7 163 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 CLPSL2Q6UWE3 100 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 ZMAT4Q9H898 229 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 hADV29S1A0JD25 119 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 IGHG4P01861 327 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 NPBQ8NG41 125 aa5.66□□□□□ -1.5
CDHR3-201ENST00000317716 UBE2D1P51668 147 aa5.65□□□□□ -1.5
CDHR3-201ENST00000317716 MRGPRG-AS1Q2M3A8 158 aa5.65□□□□□ -1.5
CDHR3-201ENST00000317716 COPS9Q8WXC6 57 aa5.65□□□□□ -1.5
CDHR3-201ENST00000317716 NIPBLQ6KC79 2804 aaeCLIP5.65□□□□□ -1.5
CDHR3-201ENST00000317716 LOC107984640A0A0U1RRK4 108 aa5.65□□□□□ -1.5
CDHR3-201ENST00000317716 ZFAND2AQ8N6M9 145 aa5.65□□□□□ -1.5
CDHR3-201ENST00000317716 CLPSL1A2RUU4 121 aa5.65□□□□□ -1.51
CDHR3-201ENST00000317716 KMT2BQ9UMN6 2715 aaPredicted RBP5.64□□□□□ -1.51
CDHR3-201ENST00000317716 CENPVL3A0A0U1RRI6 287 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 ELANEP08246 267 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 HAMPP81172 84 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 TMEM190Q8WZ59 177 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 C14orf132Q9NPU4 83 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 LINC00694P0DN24 101 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 EDN2P20800 178 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 C6orf226Q5I0X4 101 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 C20orf203Q8NBC4 194 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 TIMM17AQ99595 171 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 PPDPFQ9H3Y8 114 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 ZFAND3Q9H8U3 227 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 LAMTOR3Q9UHA4 124 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 CELSR1Q9NYQ6 3014 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 TRGV4A0A0C4DH28 118 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 RBMY1BA6NDE4 496 aaKnown RBP5.64□□□□□ -1.51
CDHR3-201ENST00000317716 RBMY1EA6NEQ0 496 aaKnown RBP5.64□□□□□ -1.51
CDHR3-201ENST00000317716 NDUFA4O00483 81 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 RBMY1DP0C7P1 496 aaKnown RBP5.64□□□□□ -1.51
CDHR3-201ENST00000317716 RBMY1A1P0DJD3 496 aaKnown RBP5.64□□□□□ -1.51
CDHR3-201ENST00000317716 RBMY1CP0DJD4 496 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 HERVK_113P63121 156 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 DAZ2Q13117 558 aaKnown RBP5.64□□□□□ -1.51
CDHR3-201ENST00000317716 DAZ4Q86SG3 579 aaKnown RBP5.64□□□□□ -1.51
CDHR3-201ENST00000317716 Q96MF0 132 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms