RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 AMELXQ99217 191 aa10.04□□□□□ -0.8
VAMP2-201ENST00000316509 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
VAMP2-201ENST00000316509 C9orf66Q5T8R8 295 aa10.03□□□□□ -0.8
VAMP2-201ENST00000316509 C9orf118A6NHY6 69 aa10.02□□□□□ -0.8
VAMP2-201ENST00000316509 CRLF1O75462 422 aa10.02□□□□□ -0.8
VAMP2-201ENST00000316509 PTTG1IPP53801 180 aa10.02□□□□□ -0.8
VAMP2-201ENST00000316509 VAMP3Q15836 100 aa10.02□□□□□ -0.8
VAMP2-201ENST00000316509 CHCHD7Q9BUK0 85 aa10.02□□□□□ -0.8
VAMP2-201ENST00000316509 TIMM21Q9BVV7 248 aa10.02□□□□□ -0.8
VAMP2-201ENST00000316509 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.8
VAMP2-201ENST00000316509 RPL36AP83881 106 aaKnown RBP10.02□□□□□ -0.81
VAMP2-201ENST00000316509 SMAGPQ0VAQ4 97 aa10.02□□□□□ -0.81
VAMP2-201ENST00000316509 RRN3P1Q2M238 152 aa10.02□□□□□ -0.81
VAMP2-201ENST00000316509 RPL36ALQ969Q0 106 aaKnown RBP10.02□□□□□ -0.81
VAMP2-201ENST00000316509 TRBV7-3A0A075B6L6 115 aa10.01□□□□□ -0.81
VAMP2-201ENST00000316509 GCSHP23434 173 aa10.01□□□□□ -0.81
VAMP2-201ENST00000316509 DAZ4Q86SG3 579 aaKnown RBP10.01□□□□□ -0.81
VAMP2-201ENST00000316509 DAZ3Q9NR90 486 aaKnown RBP10.01□□□□□ -0.81
VAMP2-201ENST00000316509 RPL35AP18077 110 aaKnown RBP10.01□□□□□ -0.81
VAMP2-201ENST00000316509 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
VAMP2-201ENST00000316509 ZNRF2Q8NHG8 242 aa10.01□□□□□ -0.81
VAMP2-201ENST00000316509 ACANP16112 2415 aa10□□□□□ -0.81
VAMP2-201ENST00000316509 SONP18583 2426 aaKnown RBP10□□□□□ -0.81
VAMP2-201ENST00000316509 ZNF815PA8K554 130 aa10□□□□□ -0.81
VAMP2-201ENST00000316509 K7EQD1 137 aa10□□□□□ -0.81
VAMP2-201ENST00000316509 MRPS36P82909 103 aaKnown RBP10□□□□□ -0.81
VAMP2-201ENST00000316509 DEFB104AQ8WTQ1 72 aa10□□□□□ -0.81
VAMP2-201ENST00000316509 TMEM223A0PJW6 202 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 LEPROTO15243 131 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 CCL25O15444 150 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 Q6ZVH6 145 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 HIST1H4GQ99525 98 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 PLAC8L1A1L4L8 177 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 Q6ZTI0 123 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 PLEKHB2Q96CS7 222 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 ZNF479Q96JC4 524 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 NOP10Q9NPE3 64 aaKnown RBP9.99□□□□□ -0.81
VAMP2-201ENST00000316509 TLN2Q9Y4G6 2542 aa9.99□□□□□ -0.81
VAMP2-201ENST00000316509 OPRPNQ99935 248 aaPredicted RBP9.98□□□□□ -0.81
VAMP2-201ENST00000316509 TRBV6-4A0A1B0GX49 114 aa9.98□□□□□ -0.81
VAMP2-201ENST00000316509 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
VAMP2-201ENST00000316509 FXYD2P54710 66 aa9.98□□□□□ -0.81
VAMP2-201ENST00000316509 HIVEP2P31629 2446 aa9.98□□□□□ -0.81
VAMP2-201ENST00000316509 RBX1P62877 108 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 WFDC10AQ9H1F0 79 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
VAMP2-201ENST00000316509 AKAP9Q99996 3911 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 TINCRA0A1B0GVN0 87 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 ZNF22P17026 224 aaPredicted RBP9.97□□□□□ -0.81
VAMP2-201ENST00000316509 LGALS3P17931 250 aaKnown RBP9.97□□□□□ -0.81
VAMP2-201ENST00000316509 EMP1P54849 157 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 UBE2D3P61077 147 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 UBE2D2P62837 147 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 AMMECR1LQ6DCA0 310 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 SCGB1D4Q6XE38 83 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 GTF2H5Q6ZYL4 71 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 FAM104AQ969W3 186 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 CITED1Q99966 193 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 GTSF1LQ9H1H1 148 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 SPANXB1Q9NS25 103 aaPredicted RBP9.97□□□□□ -0.81
VAMP2-201ENST00000316509 Q9UF83 564 aa9.97□□□□□ -0.81
VAMP2-201ENST00000316509 J3QQQ9 107 aa9.96□□□□□ -0.82
VAMP2-201ENST00000316509 TRGV2A0A075B6R0 118 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 A0A0J9YXV3 536 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 TMEM238LA0A1B0GVL6 79 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 A6NJY4 79 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 KIR2DL5BQ8NHK3 375 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 PHLDA1Q8WV24 401 aaPredicted RBP9.95□□□□□ -0.82
VAMP2-201ENST00000316509 A0A1B0GWB2 263 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 H7C423 109 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 TIRAPP58753 221 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 SLC25A29Q8N8R3 303 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 OTOGQ6ZRI0 2925 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 NACAE9PAV3 2078 aa9.95□□□□□ -0.82
VAMP2-201ENST00000316509 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
VAMP2-201ENST00000316509 IGHV3-38A0A0C4DH36 116 aa9.94□□□□□ -0.82
VAMP2-201ENST00000316509 A0A0J9YY99 117 aa9.94□□□□□ -0.82
VAMP2-201ENST00000316509 GAGE10A6NGK3 116 aa9.94□□□□□ -0.82
VAMP2-201ENST00000316509 CYSRT1A8MQ03 144 aa9.94□□□□□ -0.82
VAMP2-201ENST00000316509 OR5A1Q8NGJ0 315 aa9.94□□□□□ -0.82
VAMP2-201ENST00000316509 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.93□□□□□ -0.82
VAMP2-201ENST00000316509 GAGE12BA1L429 117 aa9.93□□□□□ -0.82
VAMP2-201ENST00000316509 IGKV2-29A2NJV5 120 aaPredicted RBP9.93□□□□□ -0.82
VAMP2-201ENST00000316509 H3BUT2 72 aa9.93□□□□□ -0.82
VAMP2-201ENST00000316509 GAGE7O76087 117 aa9.93□□□□□ -0.82
VAMP2-201ENST00000316509 GAGE12FP0CL80 117 aa9.93□□□□□ -0.82
VAMP2-201ENST00000316509 GAGE12GP0CL81 117 aa9.93□□□□□ -0.82
VAMP2-201ENST00000316509 GAGE12IP0CL82 117 aa9.93□□□□□ -0.82
VAMP2-201ENST00000316509 SRSF9Q13242 221 aaKnown RBP eCLIP9.93□□□□□ -0.82
VAMP2-201ENST00000316509 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
VAMP2-201ENST00000316509 FAM19A3Q7Z5A8 133 aa9.93□□□□□ -0.82
VAMP2-201ENST00000316509 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
VAMP2-201ENST00000316509 SAMD5Q5TGI4 173 aa9.92□□□□□ -0.82
VAMP2-201ENST00000316509 LINC00612Q8N6U2 182 aa9.92□□□□□ -0.82
VAMP2-201ENST00000316509 WFDC9Q8NEX5 89 aa9.92□□□□□ -0.82
VAMP2-201ENST00000316509 NHP2Q9NX24 153 aaKnown RBP9.92□□□□□ -0.82
VAMP2-201ENST00000316509 FABP2P12104 132 aa9.92□□□□□ -0.82
VAMP2-201ENST00000316509 TRGV4A0A0C4DH28 118 aa9.91□□□□□ -0.82
VAMP2-201ENST00000316509 UBE2D1P51668 147 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms