RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 ZNF883P0CG24 379 aa6.71□□□□□ -1.33
USF3-201ENST00000316407 PATE2Q6UY27 113 aa6.71□□□□□ -1.34
USF3-201ENST00000316407 A0A096LNI7 61 aa6.71□□□□□ -1.34
USF3-201ENST00000316407 SERP2Q8N6R1 65 aa6.71□□□□□ -1.34
USF3-201ENST00000316407 PRSS33Q8NF86 280 aa6.71□□□□□ -1.34
USF3-201ENST00000316407 Q8TCH9 128 aa6.71□□□□□ -1.34
USF3-201ENST00000316407 IGHV1-58A0A0C4DH39 117 aa6.71□□□□□ -1.34
USF3-201ENST00000316407 TM2D2Q9BX73 214 aa6.7□□□□□ -1.34
USF3-201ENST00000316407 DSCR9P59020 149 aa6.7□□□□□ -1.34
USF3-201ENST00000316407 SOSTDC1Q6X4U4 206 aa6.7□□□□□ -1.34
USF3-201ENST00000316407 IGKV1-17P01599 117 aa6.7□□□□□ -1.34
USF3-201ENST00000316407 MAPKAPK5-AS1Q8N8E1 139 aa6.7□□□□□ -1.34
USF3-201ENST00000316407 ZFYVE26Q68DK2 2539 aa6.7□□□□□ -1.34
USF3-201ENST00000316407 WT1P19544 449 aaPredicted RBP6.7□□□□□ -1.34
USF3-201ENST00000316407 NDUFA1O15239 70 aa6.7□□□□□ -1.34
USF3-201ENST00000316407 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
USF3-201ENST00000316407 COX7BP24311 80 aa6.69□□□□□ -1.34
USF3-201ENST00000316407 PRR15LQ9BU68 103 aa6.69□□□□□ -1.34
USF3-201ENST00000316407 H3BQ85 93 aa6.69□□□□□ -1.34
USF3-201ENST00000316407 FAM19A5Q7Z5A7 132 aaPredicted RBP6.69□□□□□ -1.34
USF3-201ENST00000316407 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
USF3-201ENST00000316407 I3L2K1 104 aa6.69□□□□□ -1.34
USF3-201ENST00000316407 ZFAND3Q9H8U3 227 aa6.69□□□□□ -1.34
USF3-201ENST00000316407 ACANP16112 2415 aa6.69□□□□□ -1.34
USF3-201ENST00000316407 LINC00322Q6ZN03 302 aaPredicted RBP6.68□□□□□ -1.34
USF3-201ENST00000316407 FAM19A3Q7Z5A8 133 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 K7EIM0 57 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 IGLV2-14P01704 120 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 TRBV27A0A0K0K1C4 114 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 LOC107984640A0A0U1RRK4 108 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 CRIPAKQ8N1N5 446 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 CSDC2Q9Y534 153 aaKnown RBP6.68□□□□□ -1.34
USF3-201ENST00000316407 TLN1Q9Y490 2541 aaKnown RBP6.68□□□□□ -1.34
USF3-201ENST00000316407 SPAG11BQ08648 103 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 E7EUB6 86 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 C2orf91Q6ZV80 131 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 C1orf158Q8N1D5 194 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 Q6Q795 121 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 C20orf173Q96LM9 149 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 CCL24O00175 119 aa6.68□□□□□ -1.34
USF3-201ENST00000316407 KLK12Q9UKR0 248 aa6.67□□□□□ -1.34
USF3-201ENST00000316407 SMIM9A6NGZ8 99 aa6.67□□□□□ -1.34
USF3-201ENST00000316407 ATP5EP56381 51 aaPredicted RBP6.67□□□□□ -1.34
USF3-201ENST00000316407 THSD7BQ9C0I4 1608 aa6.67□□□□□ -1.34
USF3-201ENST00000316407 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
USF3-201ENST00000316407 HHLA3Q9XRX5 114 aa6.67□□□□□ -1.34
USF3-201ENST00000316407 K7ERS5 55 aa6.67□□□□□ -1.34
USF3-201ENST00000316407 Q96MF0 132 aa6.67□□□□□ -1.34
USF3-201ENST00000316407 A8MZ25 164 aa6.67□□□□□ -1.34
USF3-201ENST00000316407 ATP5EP2Q5VTU8 51 aa6.67□□□□□ -1.34
USF3-201ENST00000316407 NEXN-AS1Q8NBZ9 246 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 LENEPQ9Y5L5 61 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 LINC00311Q8N616 119 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 LINC00467Q9BRT7 94 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 TP53TG3Q9ULZ0 132 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 C16orf74Q96GX8 76 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 AJUBAQ96IF1 538 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 COX7CP15954 63 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 PDE6GP18545 87 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 IGHV4-61A0A0C4DH41 118 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 CCKP06307 115 aa6.66□□□□□ -1.34
USF3-201ENST00000316407 LINC00269Q8N2A0 174 aa6.65□□□□□ -1.34
USF3-201ENST00000316407 C11orf53Q8IXP5 236 aa6.65□□□□□ -1.34
USF3-201ENST00000316407 IGHV4-38-2P0DP08 117 aa6.65□□□□□ -1.35
USF3-201ENST00000316407 LRRC75A-AS1Q8N1F1 130 aa6.65□□□□□ -1.35
USF3-201ENST00000316407 TRBV6-5A0A0K0K1A5 114 aa6.65□□□□□ -1.35
USF3-201ENST00000316407 A0A1B0GXF2 115 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 F8P00451 2351 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 F8W735 103 aaPredicted RBP6.64□□□□□ -1.35
USF3-201ENST00000316407 CTSZQ9UBR2 303 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 H7C423 109 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 CDKN2A-AS1Q9UH64 79 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 ZNF80P51504 273 aaPredicted RBP6.64□□□□□ -1.35
USF3-201ENST00000316407 CFAP126Q5VTH2 177 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 HIGD2AQ9BW72 106 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 IGHV7-81A0A0B4J1V7 117 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 DEFB135Q30KP9 77 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 SPRY4Q9C004 299 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 IGLV11-55A0A075B6I3 123 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 C19orf71A6NCJ1 209 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 IGLV3-1P01715 115 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 VPREB3Q9UKI3 123 aa6.64□□□□□ -1.35
USF3-201ENST00000316407 KLK5Q9Y337 293 aaPredicted RBP6.64□□□□□ -1.35
USF3-201ENST00000316407 NDUFC1O43677 76 aa6.63□□□□□ -1.35
USF3-201ENST00000316407 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
USF3-201ENST00000316407 CELA1Q9UNI1 258 aa6.63□□□□□ -1.35
USF3-201ENST00000316407 IGKV2-28A0A075B6P5 120 aa6.63□□□□□ -1.35
USF3-201ENST00000316407 IGKV2D-28P01615 120 aa6.63□□□□□ -1.35
USF3-201ENST00000316407 C20orf203Q8NBC4 194 aa6.63□□□□□ -1.35
USF3-201ENST00000316407 SPTBN4Q9H254 2564 aa6.62□□□□□ -1.35
USF3-201ENST00000316407 IGF1P05019 195 aa6.62□□□□□ -1.35
USF3-201ENST00000316407 SERP1Q9Y6X1 66 aa6.62□□□□□ -1.35
USF3-201ENST00000316407 MIFP14174 115 aa6.62□□□□□ -1.35
USF3-201ENST00000316407 TMEM223A0PJW6 202 aa6.62□□□□□ -1.35
USF3-201ENST00000316407 DNAJC9-AS1A6NH13 148 aa6.62□□□□□ -1.35
USF3-201ENST00000316407 UNQ9165/PRO28630Q6UXU0 137 aa6.62□□□□□ -1.35
USF3-201ENST00000316407 DEFB112Q30KQ8 113 aa6.62□□□□□ -1.35
USF3-201ENST00000316407 GRNP28799 593 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms