RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ZNF256Q9Y2P7 627 aaPredicted RBP5.61□□□□□ -1.51
TRIM55-202ENST00000315962 MT-ATP8P03928 68 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 XCL2Q9UBD3 114 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 TP53TG1Q9Y2A0 90 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 ADARB2-AS1A8MUL3 147 aa5.6□□□□□ -1.51
TRIM55-202ENST00000315962 F8W1H4 67 aa5.6□□□□□ -1.51
TRIM55-202ENST00000315962 PLNP26678 52 aa5.6□□□□□ -1.51
TRIM55-202ENST00000315962 RNF152Q8N8N0 203 aa5.6□□□□□ -1.51
TRIM55-202ENST00000315962 TRBV7-9A0A0J9YWB2 115 aa5.6□□□□□ -1.51
TRIM55-202ENST00000315962 LGALS9O00182 355 aa5.6□□□□□ -1.51
TRIM55-202ENST00000315962 DEFB114Q30KQ6 69 aa5.6□□□□□ -1.51
TRIM55-202ENST00000315962 NEXN-AS1Q8NBZ9 246 aa5.6□□□□□ -1.51
TRIM55-202ENST00000315962 COL6A5A8TX70 2615 aa5.6□□□□□ -1.51
TRIM55-202ENST00000315962 TMEM89A2RUT3 159 aa5.59□□□□□ -1.51
TRIM55-202ENST00000315962 RBMY1BA6NDE4 496 aaKnown RBP5.59□□□□□ -1.51
TRIM55-202ENST00000315962 RBMY1EA6NEQ0 496 aaKnown RBP5.59□□□□□ -1.51
TRIM55-202ENST00000315962 RBMY1DP0C7P1 496 aaKnown RBP5.59□□□□□ -1.51
TRIM55-202ENST00000315962 KRTAP10-3P60369 221 aa5.59□□□□□ -1.51
TRIM55-202ENST00000315962 NPC2P61916 151 aa5.59□□□□□ -1.51
TRIM55-202ENST00000315962 RNASE13Q5GAN3 156 aaKnown RBP5.59□□□□□ -1.51
TRIM55-202ENST00000315962 FAM19A4Q96LR4 140 aa5.59□□□□□ -1.51
TRIM55-202ENST00000315962 KLLNB2CW77 178 aa5.59□□□□□ -1.51
TRIM55-202ENST00000315962 CRYGDP07320 174 aa5.59□□□□□ -1.51
TRIM55-202ENST00000315962 PEMTQ9UBM1 199 aa5.59□□□□□ -1.51
TRIM55-202ENST00000315962 LINC01546A6NGU7 62 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 TSHBP01222 138 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 PROK1P58294 105 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 HILS1P60008 231 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 Q9UF83 564 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 J3QR89 54 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 TCL1BO95988 128 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 RNASE1P07998 156 aaKnown RBP5.58□□□□□ -1.52
TRIM55-202ENST00000315962 SCGB1C2P0DMR2 95 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 XGP55808 180 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 FOXI1Q12951 378 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 TRPT1Q86TN4 253 aaKnown RBP5.58□□□□□ -1.52
TRIM55-202ENST00000315962 TOMM6Q96B49 74 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 DPH3P1Q9H4G8 78 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 MAP6D1Q9H9H5 199 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 NOTCH1P46531 2555 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 H3BMM0 161 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 SPINK8P0C7L1 97 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 ZNF876PQ49A33 203 aa5.58□□□□□ -1.52
TRIM55-202ENST00000315962 RPL35AP18077 110 aaKnown RBP5.57□□□□□ -1.52
TRIM55-202ENST00000315962 CFAP126Q5VTH2 177 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 TMEM86BQ8N661 226 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 IGLV4-69A0A075B6H9 119 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 TRAV2A0A0B4J234 112 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 P0DMU3 169 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 FAM231AP0DMU4 169 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 FAM231CP0DMU5 169 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 ODF3L2Q3SX64 289 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 ORMDL2Q53FV1 153 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 ZNRF2Q8NHG8 242 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 MRAP2Q96G30 205 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 CARD19Q96LW7 228 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 SPATA25Q9BR10 227 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 CDIP1Q9H305 208 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 LENEPQ9Y5L5 61 aa5.57□□□□□ -1.52
TRIM55-202ENST00000315962 IGHV3-16A0A0C4DH30 117 aa5.56□□□□□ -1.52
TRIM55-202ENST00000315962 SUMO4Q6EEV6 95 aa5.56□□□□□ -1.52
TRIM55-202ENST00000315962 CEMP1Q6PRD7 247 aaPredicted RBP5.56□□□□□ -1.52
TRIM55-202ENST00000315962 LINC01587Q99440 93 aa5.56□□□□□ -1.52
TRIM55-202ENST00000315962 C1QTNF4Q9BXJ3 329 aa5.56□□□□□ -1.52
TRIM55-202ENST00000315962 CYSRT1A8MQ03 144 aa5.56□□□□□ -1.52
TRIM55-202ENST00000315962 ZNF56Q15929 161 aa5.56□□□□□ -1.52
TRIM55-202ENST00000315962 GEMIN7Q9H840 131 aaKnown RBP5.56□□□□□ -1.52
TRIM55-202ENST00000315962 IGHV1OR15-1A0A075B7D0 117 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 A0A0J9YY99 117 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 A8MZ25 164 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 CFC1BP0CG36 223 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 CFC1P0CG37 223 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 SS18L2Q9UHA2 77 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 A4D1N5 150 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 SDHAF1A6NFY7 115 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 Q1RN00 199 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 OXLD1Q5BKU9 147 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 NDUFA11Q86Y39 141 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 ANKRD29Q8N6D5 301 aa5.55□□□□□ -1.52
TRIM55-202ENST00000315962 TRAV12-1A0A0B4J245 112 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 C9JAW5 83 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 EIF4EBP3O60516 100 aaPredicted RBP5.54□□□□□ -1.52
TRIM55-202ENST00000315962 PF4P02776 101 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 TAL2Q16559 108 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 STHQ8IWL8 128 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 TEX29Q8N6K0 151 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 IGHV3-53P01767 116 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 CITED1Q99966 193 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 UBE2D1P51668 147 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 Q6ZUT4 128 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 RNF183Q96D59 192 aa5.54□□□□□ -1.52
TRIM55-202ENST00000315962 IGHV4-4A0A075B6R2 117 aa5.53□□□□□ -1.52
TRIM55-202ENST00000315962 LINC00315P59091 139 aa5.53□□□□□ -1.52
TRIM55-202ENST00000315962 TRAV8-3A0A0A6YYJ7 113 aa5.53□□□□□ -1.52
TRIM55-202ENST00000315962 A0A0J9YXV3 536 aa5.53□□□□□ -1.52
TRIM55-202ENST00000315962 LGALS3P17931 250 aaKnown RBP5.53□□□□□ -1.52
TRIM55-202ENST00000315962 TRBV20-1A0A075B6N2 111 aa5.52□□□□□ -1.53
TRIM55-202ENST00000315962 A0A0U1RRA0 63 aa5.52□□□□□ -1.53
TRIM55-202ENST00000315962 IGIPA6NJ69 53 aa5.52□□□□□ -1.53
TRIM55-202ENST00000315962 J3QQQ9 107 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms