RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 APC2O95996 2303 aa9.21□□□□□ -0.93
EBF1-201ENST00000313708 IGHV7-81A0A0B4J1V7 117 aa9.21□□□□□ -0.93
EBF1-201ENST00000313708 MIR7-3HGQ8N6C7 128 aa9.21□□□□□ -0.93
EBF1-201ENST00000313708 WIPF1O43516 503 aa9.21□□□□□ -0.94
EBF1-201ENST00000313708 PSMG3-AS1Q96PY0 264 aa9.21□□□□□ -0.94
EBF1-201ENST00000313708 SPTBN2O15020 2390 aa9.21□□□□□ -0.94
EBF1-201ENST00000313708 TRBV27A0A0K0K1C4 114 aa9.21□□□□□ -0.94
EBF1-201ENST00000313708 COX8CQ7Z4L0 72 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 MRPL55Q7Z7F7 128 aaKnown RBP9.2□□□□□ -0.94
EBF1-201ENST00000313708 SMCR5Q8TEV8 140 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 TRGV1A0A0A0MS02 117 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 ATP5EP2Q5VTU8 51 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 DEFB124Q8NES8 71 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 XCL1P47992 114 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 SOSTDC1Q6X4U4 206 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 XCL2Q9UBD3 114 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 E7EQL1 145 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 ABCA4P78363 2273 aa9.2□□□□□ -0.94
EBF1-201ENST00000313708 NDUFA4O00483 81 aa9.19□□□□□ -0.94
EBF1-201ENST00000313708 GPHB5Q86YW7 130 aa9.19□□□□□ -0.94
EBF1-201ENST00000313708 TRGV2A0A075B6R0 118 aa9.19□□□□□ -0.94
EBF1-201ENST00000313708 ZFAND2AQ8N6M9 145 aa9.19□□□□□ -0.94
EBF1-201ENST00000313708 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
EBF1-201ENST00000313708 NDUFA1O15239 70 aa9.19□□□□□ -0.94
EBF1-201ENST00000313708 RETNQ9HD89 108 aa9.18□□□□□ -0.94
EBF1-201ENST00000313708 RNASE3P12724 160 aaKnown RBP9.18□□□□□ -0.94
EBF1-201ENST00000313708 HILS1P60008 231 aa9.18□□□□□ -0.94
EBF1-201ENST00000313708 BLCAPP62952 87 aa9.18□□□□□ -0.94
EBF1-201ENST00000313708 PF4P02776 101 aa9.18□□□□□ -0.94
EBF1-201ENST00000313708 DKK4Q9UBT3 224 aa9.17□□□□□ -0.94
EBF1-201ENST00000313708 M0QY20 66 aa9.17□□□□□ -0.94
EBF1-201ENST00000313708 SAA4P35542 130 aa9.17□□□□□ -0.94
EBF1-201ENST00000313708 PRORYQ9H606 182 aa9.17□□□□□ -0.94
EBF1-201ENST00000313708 LINC00846Q9NV44 126 aa9.17□□□□□ -0.94
EBF1-201ENST00000313708 IGHV4OR15-8A0A075B7B6 117 aa9.16□□□□□ -0.94
EBF1-201ENST00000313708 A0A087WW49 117 aa9.16□□□□□ -0.94
EBF1-201ENST00000313708 COL4A2P08572 1712 aa9.16□□□□□ -0.94
EBF1-201ENST00000313708 MRPS36P82909 103 aaKnown RBP9.16□□□□□ -0.94
EBF1-201ENST00000313708 CACNA1GO43497 2377 aa9.15□□□□□ -0.94
EBF1-201ENST00000313708 MED13LQ71F56 2210 aa9.15□□□□□ -0.94
EBF1-201ENST00000313708 USMG5Q96IX5 58 aa9.15□□□□□ -0.94
EBF1-201ENST00000313708 DCANP1Q8TF63 244 aa9.15□□□□□ -0.94
EBF1-201ENST00000313708 C9orf85Q96MD7 179 aa9.15□□□□□ -0.94
EBF1-201ENST00000313708 TMEM256-PLSCR3K7ERE1 68 aa9.15□□□□□ -0.95
EBF1-201ENST00000313708 SCXQ7RTU7 201 aa9.15□□□□□ -0.95
EBF1-201ENST00000313708 ZFAND3Q9H8U3 227 aa9.15□□□□□ -0.95
EBF1-201ENST00000313708 FAM222AQ5U5X8 452 aa9.14□□□□□ -0.95
EBF1-201ENST00000313708 LINC00336Q6ZUF6 198 aa9.14□□□□□ -0.95
EBF1-201ENST00000313708 FUSP35637 526 aaKnown RBP eCLIP9.14□□□□□ -0.95
EBF1-201ENST00000313708 CCDC140Q96MF4 163 aa9.14□□□□□ -0.95
EBF1-201ENST00000313708 CLPSL1A2RUU4 121 aa9.14□□□□□ -0.95
EBF1-201ENST00000313708 EDN2P20800 178 aa9.14□□□□□ -0.95
EBF1-201ENST00000313708 LTBP2Q14767 1821 aa9.14□□□□□ -0.95
EBF1-201ENST00000313708 GVINP1Q7Z2Y8 2422 aa9.13□□□□□ -0.95
EBF1-201ENST00000313708 TRBV6-5A0A0K0K1A5 114 aa9.13□□□□□ -0.95
EBF1-201ENST00000313708 F8WDY8 70 aa9.13□□□□□ -0.95
EBF1-201ENST00000313708 UNQ9165/PRO28630Q6UXU0 137 aa9.13□□□□□ -0.95
EBF1-201ENST00000313708 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
EBF1-201ENST00000313708 PTPRZ1P23471 2315 aaPredicted RBP9.13□□□□□ -0.95
EBF1-201ENST00000313708 PCNX1Q96RV3 2341 aa9.13□□□□□ -0.95
EBF1-201ENST00000313708 FAM19A1Q7Z5A9 133 aa9.13□□□□□ -0.95
EBF1-201ENST00000313708 TRGV4A0A0C4DH28 118 aa9.13□□□□□ -0.95
EBF1-201ENST00000313708 C5orf38Q86SI9 138 aa9.13□□□□□ -0.95
EBF1-201ENST00000313708 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
EBF1-201ENST00000313708 DEFB121Q5J5C9 76 aa9.12□□□□□ -0.95
EBF1-201ENST00000313708 DEFB131AP59861 70 aa9.12□□□□□ -0.95
EBF1-201ENST00000313708 BRD3OSQ6XYD6 125 aa9.12□□□□□ -0.95
EBF1-201ENST00000313708 RMI2Q96E14 147 aa9.12□□□□□ -0.95
EBF1-201ENST00000313708 DSCAMO60469 2012 aa9.12□□□□□ -0.95
EBF1-201ENST00000313708 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
EBF1-201ENST00000313708 NDUFC1O43677 76 aa9.12□□□□□ -0.95
EBF1-201ENST00000313708 Q8N9W7 124 aa9.12□□□□□ -0.95
EBF1-201ENST00000313708 CNOT1A5YKK6 2376 aaKnown RBP9.12□□□□□ -0.95
EBF1-201ENST00000313708 FHL2Q14192 279 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 SMIM11BQ8TCY0 68 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 FAM215AQ9Y5M1 114 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 A0A087WYN8 130 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 INSP01308 110 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 UBE2E2Q96LR5 201 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 TRBV7-6A0A0J9YX20 115 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 MRGPRG-AS1Q2M3A8 158 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 SPTSSBQ8NFR3 76 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 ZDBF2Q9HCK1 2354 aa9.11□□□□□ -0.95
EBF1-201ENST00000313708 NOTCH3Q9UM47 2321 aa9.1□□□□□ -0.95
EBF1-201ENST00000313708 PRRC2AP48634 2157 aaKnown RBP9.1□□□□□ -0.95
EBF1-201ENST00000313708 PROK1P58294 105 aa9.1□□□□□ -0.95
EBF1-201ENST00000313708 CCKP06307 115 aa9.1□□□□□ -0.95
EBF1-201ENST00000313708 CREBBPQ92793 2442 aa9.1□□□□□ -0.95
EBF1-201ENST00000313708 STHQ8IWL8 128 aa9.08□□□□□ -0.96
EBF1-201ENST00000313708 COL6A6A6NMZ7 2263 aa9.08□□□□□ -0.96
EBF1-201ENST00000313708 MIFP14174 115 aa9.08□□□□□ -0.96
EBF1-201ENST00000313708 CFHR3Q02985 330 aa9.08□□□□□ -0.96
EBF1-201ENST00000313708 SPTA1P02549 2419 aa9.08□□□□□ -0.96
EBF1-201ENST00000313708 LRCOL1A6NCL2 159 aa9.08□□□□□ -0.96
EBF1-201ENST00000313708 PCSK5Q92824 1860 aa9.07□□□□□ -0.96
EBF1-201ENST00000313708 H3BUX3 64 aa9.07□□□□□ -0.96
EBF1-201ENST00000313708 SS18Q15532 418 aa9.07□□□□□ -0.96
EBF1-201ENST00000313708 SEM1Q6ZVN7 128 aa9.07□□□□□ -0.96
EBF1-201ENST00000313708 Q8N2B8 174 aa9.07□□□□□ -0.96
EBF1-201ENST00000313708 F8W735 103 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms