RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 KAAG1Q9UBP8 84 aa11.98□□□□□ -0.49
SOX30-202ENST00000311371 PKIGQ9Y2B9 76 aa11.97□□□□□ -0.49
SOX30-202ENST00000311371 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
SOX30-202ENST00000311371 ECSCRQ19T08 205 aa11.97□□□□□ -0.49
SOX30-202ENST00000311371 C22orf24Q9Y442 160 aa11.97□□□□□ -0.49
SOX30-202ENST00000311371 TLN1Q9Y490 2541 aaKnown RBP11.96□□□□□ -0.49
SOX30-202ENST00000311371 PFN2P35080 140 aa11.96□□□□□ -0.49
SOX30-202ENST00000311371 LINC00336Q6ZUF6 198 aa11.96□□□□□ -0.49
SOX30-202ENST00000311371 Q8N2B8 174 aa11.96□□□□□ -0.49
SOX30-202ENST00000311371 C20orf203Q8NBC4 194 aa11.96□□□□□ -0.49
SOX30-202ENST00000311371 Q9HAA7 133 aa11.96□□□□□ -0.49
SOX30-202ENST00000311371 CD28P10747 220 aa11.96□□□□□ -0.49
SOX30-202ENST00000311371 DPM3Q9P2X0 92 aa11.96□□□□□ -0.49
SOX30-202ENST00000311371 USP17L23D6RBM5 183 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 MALP21145 153 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 FHL2Q14192 279 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 NUP37Q8NFH4 326 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 IGKV3-7A0A075B6H7 116 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 MED14OSP0DP75 135 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 PIMREGQ9BSJ6 248 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 PRO0628Q9UI54 55 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 LENEPQ9Y5L5 61 aa11.95□□□□□ -0.5
SOX30-202ENST00000311371 DNAL4O96015 105 aa11.94□□□□□ -0.5
SOX30-202ENST00000311371 RPL35AP18077 110 aaKnown RBP11.94□□□□□ -0.5
SOX30-202ENST00000311371 MBD3L2Q8NHZ7 208 aaPredicted RBP11.94□□□□□ -0.5
SOX30-202ENST00000311371 PCNX1Q96RV3 2341 aa11.94□□□□□ -0.5
SOX30-202ENST00000311371 ATRXP46100 2492 aa11.94□□□□□ -0.5
SOX30-202ENST00000311371 IGFL3Q6UXB1 125 aa11.94□□□□□ -0.5
SOX30-202ENST00000311371 VSIG2Q96IQ7 327 aa11.94□□□□□ -0.5
SOX30-202ENST00000311371 FAM218AQ96MZ4 157 aa11.94□□□□□ -0.5
SOX30-202ENST00000311371 BSPH1Q075Z2 132 aa11.93□□□□□ -0.5
SOX30-202ENST00000311371 LINC01561Q8N1V8 128 aa11.93□□□□□ -0.5
SOX30-202ENST00000311371 ZNF625Q96I27 306 aaPredicted RBP11.93□□□□□ -0.5
SOX30-202ENST00000311371 HOXD3P31249 432 aaPredicted RBP11.93□□□□□ -0.5
SOX30-202ENST00000311371 FAM223AQ8IWN6 122 aa11.93□□□□□ -0.5
SOX30-202ENST00000311371 ITLN2Q8WWU7 325 aaPredicted RBP11.93□□□□□ -0.5
SOX30-202ENST00000311371 TINCRA0A1B0GVN0 87 aa11.92□□□□□ -0.5
SOX30-202ENST00000311371 BEAN1Q3B7T3 259 aa11.92□□□□□ -0.5
SOX30-202ENST00000311371 CCDC140Q96MF4 163 aa11.92□□□□□ -0.5
SOX30-202ENST00000311371 ACACBO00763 2458 aa11.92□□□□□ -0.5
SOX30-202ENST00000311371 TRBV6-5A0A0K0K1A5 114 aa11.91□□□□□ -0.5
SOX30-202ENST00000311371 FAM223BA6NKX1 122 aa11.91□□□□□ -0.5
SOX30-202ENST00000311371 C9orf139Q6ZV77 190 aa11.91□□□□□ -0.5
SOX30-202ENST00000311371 RNASE6Q93091 150 aaKnown RBP11.91□□□□□ -0.5
SOX30-202ENST00000311371 C14orf132Q9NPU4 83 aa11.91□□□□□ -0.5
SOX30-202ENST00000311371 PKD1L2Q7Z442 2459 aa11.91□□□□□ -0.5
SOX30-202ENST00000311371 ADGRG4Q8IZF6 3080 aa11.91□□□□□ -0.5
SOX30-202ENST00000311371 IGHV7-81A0A0B4J1V7 117 aa11.9□□□□□ -0.5
SOX30-202ENST00000311371 M0QY20 66 aa11.9□□□□□ -0.5
SOX30-202ENST00000311371 MRPS36P82909 103 aaKnown RBP11.9□□□□□ -0.5
SOX30-202ENST00000311371 PRIMA1Q86XR5 153 aa11.9□□□□□ -0.5
SOX30-202ENST00000311371 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
SOX30-202ENST00000311371 LINC00846Q9NV44 126 aa11.9□□□□□ -0.5
SOX30-202ENST00000311371 FAM215AQ9Y5M1 114 aa11.9□□□□□ -0.5
SOX30-202ENST00000311371 F8WDY8 70 aa11.89□□□□□ -0.51
SOX30-202ENST00000311371 LINC00308Q8TCZ7 52 aa11.89□□□□□ -0.51
SOX30-202ENST00000311371 C9orf129Q5T035 196 aaKnown RBP11.89□□□□□ -0.51
SOX30-202ENST00000311371 MED13LQ71F56 2210 aa11.89□□□□□ -0.51
SOX30-202ENST00000311371 Q6JHZ5 121 aa11.88□□□□□ -0.51
SOX30-202ENST00000311371 TMEM243Q9BU79 118 aa11.88□□□□□ -0.51
SOX30-202ENST00000311371 SPTA1P02549 2419 aa11.87□□□□□ -0.51
SOX30-202ENST00000311371 G3V318 75 aa11.87□□□□□ -0.51
SOX30-202ENST00000311371 CIRBPQ14011 172 aaKnown RBP11.87□□□□□ -0.51
SOX30-202ENST00000311371 FAM104AQ969W3 186 aa11.87□□□□□ -0.51
SOX30-202ENST00000311371 HILS1P60008 231 aa11.86□□□□□ -0.51
SOX30-202ENST00000311371 FAM222AQ5U5X8 452 aa11.86□□□□□ -0.51
SOX30-202ENST00000311371 Q8NA96 180 aa11.86□□□□□ -0.51
SOX30-202ENST00000311371 ATP6V0E1O15342 81 aa11.85□□□□□ -0.51
SOX30-202ENST00000311371 WFDC11Q8NEX6 87 aa11.85□□□□□ -0.51
SOX30-202ENST00000311371 FAM110DQ8TAY7 271 aaPredicted RBP11.85□□□□□ -0.51
SOX30-202ENST00000311371 PRORYQ9H606 182 aa11.85□□□□□ -0.51
SOX30-202ENST00000311371 U3KQE9 123 aa11.85□□□□□ -0.51
SOX30-202ENST00000311371 TIMM17BO60830 172 aa11.84□□□□□ -0.51
SOX30-202ENST00000311371 C20orf197Q8N268 126 aa11.84□□□□□ -0.51
SOX30-202ENST00000311371 WFDC9Q8NEX5 89 aa11.84□□□□□ -0.51
SOX30-202ENST00000311371 USP24Q9UPU5 2620 aa11.84□□□□□ -0.51
SOX30-202ENST00000311371 SOSTDC1Q6X4U4 206 aa11.84□□□□□ -0.51
SOX30-202ENST00000311371 FAM236DA0A1B0GTK5 79 aa11.83□□□□□ -0.52
SOX30-202ENST00000311371 GHRHP01286 108 aa11.83□□□□□ -0.52
SOX30-202ENST00000311371 FAM236CP0DP71 79 aa11.83□□□□□ -0.52
SOX30-202ENST00000311371 KLK9Q9UKQ9 250 aa11.83□□□□□ -0.52
SOX30-202ENST00000311371 SVEP1Q4LDE5 3571 aa11.83□□□□□ -0.52
SOX30-202ENST00000311371 TRAV23DV6A0A075B6W5 121 aa11.83□□□□□ -0.52
SOX30-202ENST00000311371 Q9H8V8 135 aa11.83□□□□□ -0.52
SOX30-202ENST00000311371 TRBV12-3P01733 135 aa11.82□□□□□ -0.52
SOX30-202ENST00000311371 CDKN2A-AS1Q9UH64 79 aa11.82□□□□□ -0.52
SOX30-202ENST00000311371 IGHV3-73A0A0B4J1V6 119 aa11.82□□□□□ -0.52
SOX30-202ENST00000311371 NDUFC2O95298 119 aa11.82□□□□□ -0.52
SOX30-202ENST00000311371 EDN2P20800 178 aa11.82□□□□□ -0.52
SOX30-202ENST00000311371 C9orf85Q96MD7 179 aa11.81□□□□□ -0.52
SOX30-202ENST00000311371 NDUFA1O15239 70 aa11.81□□□□□ -0.52
SOX30-202ENST00000311371 UNQ9165/PRO28630Q6UXU0 137 aa11.81□□□□□ -0.52
SOX30-202ENST00000311371 UBE2D4Q9Y2X8 147 aa11.81□□□□□ -0.52
SOX30-202ENST00000311371 COL6A6A6NMZ7 2263 aa11.81□□□□□ -0.52
SOX30-202ENST00000311371 RELNP78509 3460 aa11.81□□□□□ -0.52
SOX30-202ENST00000311371 Q8N9W7 124 aa11.8□□□□□ -0.52
SOX30-202ENST00000311371 NBASA2RRP1 2371 aa11.8□□□□□ -0.52
SOX30-202ENST00000311371 RBMY1BA6NDE4 496 aaKnown RBP11.8□□□□□ -0.52
SOX30-202ENST00000311371 RBMY1EA6NEQ0 496 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms