RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 UBE2D2P62837 147 aa7.22□□□□□ -1.25
CHRNA9-201ENST00000310169 ZNF575Q86XF7 245 aa7.22□□□□□ -1.25
CHRNA9-201ENST00000310169 DCANP1Q8TF63 244 aa7.22□□□□□ -1.25
CHRNA9-201ENST00000310169 TOMM6Q96B49 74 aa7.22□□□□□ -1.25
CHRNA9-201ENST00000310169 MAP6D1Q9H9H5 199 aa7.22□□□□□ -1.25
CHRNA9-201ENST00000310169 DNAH9Q9NYC9 4486 aa7.21□□□□□ -1.25
CHRNA9-201ENST00000310169 F8WDY8 70 aa7.21□□□□□ -1.25
CHRNA9-201ENST00000310169 K7ERJ3 54 aa7.21□□□□□ -1.25
CHRNA9-201ENST00000310169 ETDBQ3ZM63 59 aa7.21□□□□□ -1.25
CHRNA9-201ENST00000310169 AGRNO00468 2067 aa7.21□□□□□ -1.26
CHRNA9-201ENST00000310169 IGKV2-40A0A087WW87 121 aaPredicted RBP7.21□□□□□ -1.26
CHRNA9-201ENST00000310169 RBMY1BA6NDE4 496 aaKnown RBP7.21□□□□□ -1.26
CHRNA9-201ENST00000310169 RBMY1EA6NEQ0 496 aaKnown RBP7.21□□□□□ -1.26
CHRNA9-201ENST00000310169 SMKR1H3BMG3 65 aa7.21□□□□□ -1.26
CHRNA9-201ENST00000310169 IGKV2D-40P01614 121 aaPredicted RBP7.21□□□□□ -1.26
CHRNA9-201ENST00000310169 RBMY1DP0C7P1 496 aaKnown RBP7.21□□□□□ -1.26
CHRNA9-201ENST00000310169 SMIM2Q9BVW6 85 aa7.21□□□□□ -1.26
CHRNA9-201ENST00000310169 GAGE12JA6NER3 117 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 GAGE7O76087 117 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 ORM1P02763 201 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 GAGE12FP0CL80 117 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 GAGE12GP0CL81 117 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 GAGE12IP0CL82 117 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 ZNF80P51504 273 aaPredicted RBP7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 GAGE4Q13068 117 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 MORN3Q6PF18 240 aaPredicted RBP7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 C16orf92Q96LL3 132 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 TMSB15BA0A087X1C1 80 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 RPL35AP18077 110 aaKnown RBP7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 ASIPP42127 132 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 STHQ8IWL8 128 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 NEXN-AS1Q8NBZ9 246 aa7.2□□□□□ -1.26
CHRNA9-201ENST00000310169 APOC4P55056 127 aa7.19□□□□□ -1.26
CHRNA9-201ENST00000310169 XGP55808 180 aa7.19□□□□□ -1.26
CHRNA9-201ENST00000310169 ERCC8Q13216 396 aa7.19□□□□□ -1.26
CHRNA9-201ENST00000310169 C9orf47Q6ZRZ4 202 aa7.19□□□□□ -1.26
CHRNA9-201ENST00000310169 Q6ZUT4 128 aa7.19□□□□□ -1.26
CHRNA9-201ENST00000310169 POM121L12Q8N7R1 296 aa7.19□□□□□ -1.26
CHRNA9-201ENST00000310169 MAPKAPK5-AS1Q8N8E1 139 aa7.19□□□□□ -1.26
CHRNA9-201ENST00000310169 HERVK_113P61574 105 aa7.18□□□□□ -1.26
CHRNA9-201ENST00000310169 ANXA2RQ3ZCQ2 193 aa7.18□□□□□ -1.26
CHRNA9-201ENST00000310169 SH2D6Q7Z4S9 175 aa7.18□□□□□ -1.26
CHRNA9-201ENST00000310169 Q6Q795 121 aa7.18□□□□□ -1.26
CHRNA9-201ENST00000310169 KNCNA6PVL3 124 aa7.17□□□□□ -1.26
CHRNA9-201ENST00000310169 TMEM78Q5T7P6 136 aa7.17□□□□□ -1.26
CHRNA9-201ENST00000310169 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.17□□□□□ -1.26
CHRNA9-201ENST00000310169 SPANXDQ9BXN6 97 aa7.17□□□□□ -1.26
CHRNA9-201ENST00000310169 TM2D3Q9BRN9 247 aa7.17□□□□□ -1.26
CHRNA9-201ENST00000310169 IGKV3D-20A0A0C4DH25 116 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 SOCS3O14543 225 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 FXYD7P58549 80 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 MRPL23Q16540 153 aaKnown RBP7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 SYT8Q8NBV8 401 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 KIR2DL5BQ8NHK3 375 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 TENM3Q9P273 2699 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 STAB2Q8WWQ8 2551 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 A8MWV9 139 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 SUMO2P61956 95 aaKnown RBP7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 IGFL4Q6B9Z1 124 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 TMEM141Q96I45 108 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 SCGB3A1Q96QR1 104 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 DPH3P1Q9H4G8 78 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 MSRB1Q9NZV6 116 aa7.16□□□□□ -1.26
CHRNA9-201ENST00000310169 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.26
CHRNA9-201ENST00000310169 ZFAND6Q6FIF0 208 aa7.15□□□□□ -1.26
CHRNA9-201ENST00000310169 RNF182Q8N6D2 247 aa7.15□□□□□ -1.26
CHRNA9-201ENST00000310169 Q8TAT8 98 aa7.15□□□□□ -1.26
CHRNA9-201ENST00000310169 TTTY13Q9BZ97 58 aa7.15□□□□□ -1.26
CHRNA9-201ENST00000310169 IGKV3-20P01619 116 aa7.15□□□□□ -1.27
CHRNA9-201ENST00000310169 SMCPP49901 116 aaPredicted RBP7.15□□□□□ -1.27
CHRNA9-201ENST00000310169 DEFB135Q30KP9 77 aa7.15□□□□□ -1.27
CHRNA9-201ENST00000310169 RETNQ9HD89 108 aa7.15□□□□□ -1.27
CHRNA9-201ENST00000310169 PRSS29PA6NIE9 313 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 C11orf86A6NJI1 115 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 NXPH4O95158 308 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 P0DMU3 169 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 FAM231AP0DMU4 169 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 FAM231CP0DMU5 169 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 HLA-DMBP28068 263 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 DEFB1P60022 68 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 SPANXN1Q5VSR9 72 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 TRPT1Q86TN4 253 aaKnown RBP7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 DNAJC30Q96LL9 226 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 C20orf173Q96LM9 149 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 TIMM17AQ99595 171 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 PRADC1Q9BSG0 188 aa7.14□□□□□ -1.27
CHRNA9-201ENST00000310169 ZNF815PA8K554 130 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 F6UB75 175 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 H3BMM0 161 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 C10orf126Q8N4M7 172 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 BAALCQ8WXS3 180 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 LINC00477Q96M19 166 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 TRAV8-2A0A0B4J237 113 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 F5H768 121 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 SPRY2O43597 315 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 AMTNQ6UX39 209 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 AGPAT4-IT1Q9H0P7 198 aa7.13□□□□□ -1.27
CHRNA9-201ENST00000310169 A0A0B4J2C4 111 aa7.12□□□□□ -1.27
CHRNA9-201ENST00000310169 A0A0J9YX75 114 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms