RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 VCYO14598 125 aa8.75□□□□□ -1.01
APTX-201ENST00000309615 TSHBP01222 138 aa8.75□□□□□ -1.01
APTX-201ENST00000309615 IGHV3-30P01768 117 aa8.75□□□□□ -1.01
APTX-201ENST00000309615 IGHV3-33P01772 117 aa8.75□□□□□ -1.01
APTX-201ENST00000309615 IGHV3-30-3P0DP02 117 aa8.75□□□□□ -1.01
APTX-201ENST00000309615 IGHV3-30-5P0DP03 117 aa8.75□□□□□ -1.01
APTX-201ENST00000309615 LINC01556Q5JQF7 62 aa8.75□□□□□ -1.01
APTX-201ENST00000309615 NIT1Q86X76 327 aa8.75□□□□□ -1.01
APTX-201ENST00000309615 AMTP48728 403 aa8.74□□□□□ -1.01
APTX-201ENST00000309615 FABP9Q0Z7S8 132 aa8.74□□□□□ -1.01
APTX-201ENST00000309615 LAMTOR2Q9Y2Q5 125 aa8.74□□□□□ -1.01
APTX-201ENST00000309615 TRAPPC1Q9Y5R8 145 aa8.74□□□□□ -1.01
APTX-201ENST00000309615 TMEM262E9PQX1 116 aa8.74□□□□□ -1.01
APTX-201ENST00000309615 RPL32P62910 135 aaKnown RBP8.74□□□□□ -1.01
APTX-201ENST00000309615 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
APTX-201ENST00000309615 SMIM2Q9BVW6 85 aa8.74□□□□□ -1.01
APTX-201ENST00000309615 LOC389332A0A1B0GUA5 103 aa8.73□□□□□ -1.01
APTX-201ENST00000309615 GAGE6Q13070 117 aa8.73□□□□□ -1.01
APTX-201ENST00000309615 MPV17L2Q567V2 206 aa8.72□□□□□ -1.01
APTX-201ENST00000309615 TTC32Q5I0X7 151 aa8.72□□□□□ -1.01
APTX-201ENST00000309615 KIR2DL4Q99706 377 aa8.72□□□□□ -1.01
APTX-201ENST00000309615 ALKBH7Q9BT30 221 aaPredicted RBP8.72□□□□□ -1.01
APTX-201ENST00000309615 CHCHD7Q9BUK0 85 aa8.72□□□□□ -1.01
APTX-201ENST00000309615 MAP1LC3AQ9H492 121 aa8.72□□□□□ -1.01
APTX-201ENST00000309615 TRAV9-2A0A087WT02 112 aa8.72□□□□□ -1.01
APTX-201ENST00000309615 A0A087WX48 190 aa8.72□□□□□ -1.01
APTX-201ENST00000309615 S100A1P23297 94 aa8.72□□□□□ -1.01
APTX-201ENST00000309615 FCER1GP30273 86 aa8.72□□□□□ -1.01
APTX-201ENST00000309615 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.01
APTX-201ENST00000309615 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.01
APTX-201ENST00000309615 COLCA2A8K830 154 aa8.71□□□□□ -1.01
APTX-201ENST00000309615 PRSS47A8MTI9 375 aa8.71□□□□□ -1.01
APTX-201ENST00000309615 Q8N976 141 aa8.71□□□□□ -1.01
APTX-201ENST00000309615 RYR2Q92736 4967 aa8.71□□□□□ -1.02
APTX-201ENST00000309615 K7EP13 123 aa8.7□□□□□ -1.02
APTX-201ENST00000309615 UBE2L6O14933 153 aa8.7□□□□□ -1.02
APTX-201ENST00000309615 TCAPO15273 167 aa8.7□□□□□ -1.02
APTX-201ENST00000309615 ESDP10768 282 aa8.7□□□□□ -1.02
APTX-201ENST00000309615 RBX1P62877 108 aa8.7□□□□□ -1.02
APTX-201ENST00000309615 C10orf126Q8N4M7 172 aa8.7□□□□□ -1.02
APTX-201ENST00000309615 DNAH6Q9C0G6 4158 aa8.69□□□□□ -1.02
APTX-201ENST00000309615 RYR3Q15413 4870 aa8.69□□□□□ -1.02
APTX-201ENST00000309615 IFI27P40305 119 aaPredicted RBP8.69□□□□□ -1.02
APTX-201ENST00000309615 PKIAP61925 76 aa8.69□□□□□ -1.02
APTX-201ENST00000309615 Q8N8P6 123 aa8.69□□□□□ -1.02
APTX-201ENST00000309615 KLK12Q9UKR0 248 aa8.69□□□□□ -1.02
APTX-201ENST00000309615 IBA57-AS1B1ANH7 110 aa8.68□□□□□ -1.02
APTX-201ENST00000309615 C1orf134Q5TEV5 83 aa8.68□□□□□ -1.02
APTX-201ENST00000309615 IGLV4-60A0A075B6I1 120 aa8.68□□□□□ -1.02
APTX-201ENST00000309615 ANGP03950 147 aaKnown RBP8.68□□□□□ -1.02
APTX-201ENST00000309615 RAB5AP20339 215 aa8.68□□□□□ -1.02
APTX-201ENST00000309615 NXT2Q9NPJ8 142 aaKnown RBP8.68□□□□□ -1.02
APTX-201ENST00000309615 A0A1B0GUV1 79 aa8.67□□□□□ -1.02
APTX-201ENST00000309615 H7C423 109 aa8.67□□□□□ -1.02
APTX-201ENST00000309615 TRGC2P03986 189 aa8.67□□□□□ -1.02
APTX-201ENST00000309615 FGF6P10767 208 aa8.67□□□□□ -1.02
APTX-201ENST00000309615 C6orf223Q8N319 242 aa8.67□□□□□ -1.02
APTX-201ENST00000309615 AMMECR1LQ6DCA0 310 aa8.66□□□□□ -1.02
APTX-201ENST00000309615 RNASEKQ6P5S7 137 aaKnown RBP8.66□□□□□ -1.02
APTX-201ENST00000309615 C20orf203Q8NBC4 194 aa8.66□□□□□ -1.02
APTX-201ENST00000309615 PRSS3P2Q8NHM4 247 aa8.66□□□□□ -1.02
APTX-201ENST00000309615 Q9HAA7 133 aa8.66□□□□□ -1.02
APTX-201ENST00000309615 RTL8CO15255 209 aa8.66□□□□□ -1.02
APTX-201ENST00000309615 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
APTX-201ENST00000309615 LAGE3Q14657 143 aa8.66□□□□□ -1.02
APTX-201ENST00000309615 C18orf32Q8TCD1 76 aa8.66□□□□□ -1.02
APTX-201ENST00000309615 UBE2WQ96B02 151 aa8.66□□□□□ -1.02
APTX-201ENST00000309615 DNAH2Q9P225 4427 aa8.65□□□□□ -1.02
APTX-201ENST00000309615 CLPSL2Q6UWE3 100 aa8.65□□□□□ -1.02
APTX-201ENST00000309615 LINC00269Q8N2A0 174 aa8.65□□□□□ -1.02
APTX-201ENST00000309615 ENHOQ6UWT2 76 aa8.64□□□□□ -1.03
APTX-201ENST00000309615 MRPL52Q86TS9 123 aaKnown RBP8.64□□□□□ -1.03
APTX-201ENST00000309615 TMA7Q9Y2S6 64 aaKnown RBP8.64□□□□□ -1.03
APTX-201ENST00000309615 UBE2D4Q9Y2X8 147 aa8.64□□□□□ -1.03
APTX-201ENST00000309615 K7EMI3 77 aa8.64□□□□□ -1.03
APTX-201ENST00000309615 ZNF25P17030 456 aaPredicted RBP8.64□□□□□ -1.03
APTX-201ENST00000309615 BTF3P20290 206 aaKnown RBP8.64□□□□□ -1.03
APTX-201ENST00000309615 ORMDL2Q53FV1 153 aa8.64□□□□□ -1.03
APTX-201ENST00000309615 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
APTX-201ENST00000309615 TMEM18Q96B42 140 aa8.64□□□□□ -1.03
APTX-201ENST00000309615 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
APTX-201ENST00000309615 OR5A1Q8NGJ0 315 aa8.63□□□□□ -1.03
APTX-201ENST00000309615 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
APTX-201ENST00000309615 LINC01546A6NGU7 62 aa8.62□□□□□ -1.03
APTX-201ENST00000309615 CRPP02741 224 aa8.62□□□□□ -1.03
APTX-201ENST00000309615 REG3AQ06141 175 aa8.62□□□□□ -1.03
APTX-201ENST00000309615 FA2HQ7L5A8 372 aa8.62□□□□□ -1.03
APTX-201ENST00000309615 NFE4Q86UQ8 179 aa8.62□□□□□ -1.03
APTX-201ENST00000309615 URB1-AS1Q96HZ7 61 aa8.62□□□□□ -1.03
APTX-201ENST00000309615 TMEM101Q96IK0 257 aa8.62□□□□□ -1.03
APTX-201ENST00000309615 Q0VG73 95 aa8.62□□□□□ -1.03
APTX-201ENST00000309615 DGAT2L7PQ6IED9 249 aa8.61□□□□□ -1.03
APTX-201ENST00000309615 C2orf66Q6UXQ4 117 aa8.61□□□□□ -1.03
APTX-201ENST00000309615 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
APTX-201ENST00000309615 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
APTX-201ENST00000309615 CSDC2Q9Y534 153 aaKnown RBP8.61□□□□□ -1.03
APTX-201ENST00000309615 IGKV3OR2-268A0A0C4DH90 116 aa8.6□□□□□ -1.03
APTX-201ENST00000309615 LINC00614P0C842 121 aa8.6□□□□□ -1.03
APTX-201ENST00000309615 MIAQ16674 131 aa8.6□□□□□ -1.03
APTX-201ENST00000309615 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms