RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 TRBV6-5A0A0K0K1A5 114 aa8.17□□□□□ -1.1
PCDHGC4-201ENST00000306593 IGLL5B9A064 214 aa8.17□□□□□ -1.1
PCDHGC4-201ENST00000306593 PRR9Q5T870 116 aa8.17□□□□□ -1.1
PCDHGC4-201ENST00000306593 APRG1Q8IVJ8 170 aa8.17□□□□□ -1.1
PCDHGC4-201ENST00000306593 FXYD2P54710 66 aa8.17□□□□□ -1.1
PCDHGC4-201ENST00000306593 DCANP1Q8TF63 244 aa8.16□□□□□ -1.1
PCDHGC4-201ENST00000306593 ZNF702PQ9H963 129 aa8.16□□□□□ -1.1
PCDHGC4-201ENST00000306593 C16orf74Q96GX8 76 aa8.16□□□□□ -1.1
PCDHGC4-201ENST00000306593 MAP6D1Q9H9H5 199 aa8.16□□□□□ -1.1
PCDHGC4-201ENST00000306593 USP24Q9UPU5 2620 aa8.16□□□□□ -1.1
PCDHGC4-201ENST00000306593 RNASE3P12724 160 aaKnown RBP8.16□□□□□ -1.1
PCDHGC4-201ENST00000306593 RPL39P62891 51 aaKnown RBP8.16□□□□□ -1.1
PCDHGC4-201ENST00000306593 H3BMM0 161 aa8.15□□□□□ -1.1
PCDHGC4-201ENST00000306593 DAZ2Q13117 558 aaKnown RBP8.15□□□□□ -1.1
PCDHGC4-201ENST00000306593 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
PCDHGC4-201ENST00000306593 UBE2WQ96B02 151 aa8.15□□□□□ -1.1
PCDHGC4-201ENST00000306593 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
PCDHGC4-201ENST00000306593 EPG5Q9HCE0 2579 aa8.15□□□□□ -1.1
PCDHGC4-201ENST00000306593 CRYBA4P53673 196 aa8.15□□□□□ -1.1
PCDHGC4-201ENST00000306593 ZNF843Q8N446 348 aa8.15□□□□□ -1.1
PCDHGC4-201ENST00000306593 ESM1Q9NQ30 184 aa8.15□□□□□ -1.1
PCDHGC4-201ENST00000306593 TM2D2Q9BX73 214 aa8.15□□□□□ -1.11
PCDHGC4-201ENST00000306593 SOCS3O14543 225 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 TTTY13Q9BZ97 58 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 DNAJC9-AS1A6NH13 148 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 AVPP01185 164 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 Q6ZS46 218 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 RMI2Q96E14 147 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 OVOL2Q9BRP0 275 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 K7EQD1 137 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 C9orf85Q96MD7 179 aa8.14□□□□□ -1.11
PCDHGC4-201ENST00000306593 A0A0J9YXV3 536 aa8.13□□□□□ -1.11
PCDHGC4-201ENST00000306593 C2orf91Q6ZV80 131 aa8.13□□□□□ -1.11
PCDHGC4-201ENST00000306593 TRAV8-4A0A0B4J246 113 aa8.13□□□□□ -1.11
PCDHGC4-201ENST00000306593 TRBV10-1A0A0K0K1A3 114 aa8.13□□□□□ -1.11
PCDHGC4-201ENST00000306593 M0QY20 66 aa8.13□□□□□ -1.11
PCDHGC4-201ENST00000306593 IFITM1P13164 125 aa8.13□□□□□ -1.11
PCDHGC4-201ENST00000306593 DEFB114Q30KQ6 69 aa8.13□□□□□ -1.11
PCDHGC4-201ENST00000306593 NOP10Q9NPE3 64 aaKnown RBP8.12□□□□□ -1.11
PCDHGC4-201ENST00000306593 PIK3CD-AS1Q5SR53 167 aa8.12□□□□□ -1.11
PCDHGC4-201ENST00000306593 TRBV7-3A0A075B6L6 115 aa8.12□□□□□ -1.11
PCDHGC4-201ENST00000306593 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.12□□□□□ -1.11
PCDHGC4-201ENST00000306593 IGKV2-29A2NJV5 120 aaPredicted RBP8.12□□□□□ -1.11
PCDHGC4-201ENST00000306593 H3BMG7 143 aa8.12□□□□□ -1.11
PCDHGC4-201ENST00000306593 C10orf99Q6UWK7 81 aa8.12□□□□□ -1.11
PCDHGC4-201ENST00000306593 PPDPFLQ8WWR9 84 aa8.12□□□□□ -1.11
PCDHGC4-201ENST00000306593 TMEM263Q8WUH6 116 aaKnown RBP8.11□□□□□ -1.11
PCDHGC4-201ENST00000306593 C9JAW5 83 aa8.11□□□□□ -1.11
PCDHGC4-201ENST00000306593 SPINK8P0C7L1 97 aa8.11□□□□□ -1.11
PCDHGC4-201ENST00000306593 CFC1BP0CG36 223 aa8.11□□□□□ -1.11
PCDHGC4-201ENST00000306593 CFC1P0CG37 223 aa8.11□□□□□ -1.11
PCDHGC4-201ENST00000306593 POLR2KP53803 58 aaKnown RBP8.11□□□□□ -1.11
PCDHGC4-201ENST00000306593 ETDBQ3ZM63 59 aa8.11□□□□□ -1.11
PCDHGC4-201ENST00000306593 A0A096LNJ9 63 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 FGF6P10767 208 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 HERV-K104P63124 156 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 ZNF292O60281 2723 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 LINC01546A6NGU7 62 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 IGKV2D-26A0A0A0MRZ7 120 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 GAS8-AS1O95177 125 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 XCL1P47992 114 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 RNASE13Q5GAN3 156 aaKnown RBP8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 Q6ZQT7 251 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 GAGE2AQ6NT46 116 aa8.1□□□□□ -1.11
PCDHGC4-201ENST00000306593 HAMPP81172 84 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 GAGE2BQ13066 116 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 GAGE2EQ4V326 116 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 Q6ZSV7 163 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 C1orf43Q9BWL3 253 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 GAGE2DQ9UEU5 116 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 TP73-AS1Q9UF72 201 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 TRAV4A0A0B4J268 109 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 CCL18P55774 89 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 PYGO1Q9Y3Y4 419 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 DMXL1Q9Y485 3027 aa8.09□□□□□ -1.11
PCDHGC4-201ENST00000306593 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 AKAP13Q12802 2813 aa8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 ASPMQ8IZT6 3477 aa8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 IGLV2-18A0A075B6J9 118 aa8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 IGHV1-58A0A0C4DH39 117 aa8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 TEX48A0A1B0GUV7 120 aa8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 AMTNQ6UX39 209 aa8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 SPANXB1Q9NS25 103 aaPredicted RBP8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 IGLV10-54A0A075B6I4 117 aa8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 HHLA3Q9XRX5 114 aa8.08□□□□□ -1.12
PCDHGC4-201ENST00000306593 TINCRA0A1B0GVN0 87 aa8.07□□□□□ -1.12
PCDHGC4-201ENST00000306593 RNASE8Q8TDE3 154 aaKnown RBP8.07□□□□□ -1.12
PCDHGC4-201ENST00000306593 CRYGDP07320 174 aa8.07□□□□□ -1.12
PCDHGC4-201ENST00000306593 SLC25A29Q8N8R3 303 aa8.07□□□□□ -1.12
PCDHGC4-201ENST00000306593 A4D1N5 150 aa8.07□□□□□ -1.12
PCDHGC4-201ENST00000306593 ANAPC13Q9BS18 74 aa8.07□□□□□ -1.12
PCDHGC4-201ENST00000306593 C5orf38Q86SI9 138 aa8.06□□□□□ -1.12
PCDHGC4-201ENST00000306593 MUSTN1Q8IVN3 82 aa8.06□□□□□ -1.12
PCDHGC4-201ENST00000306593 WFDC11Q8NEX6 87 aa8.06□□□□□ -1.12
PCDHGC4-201ENST00000306593 DEFB4AO15263 64 aa8.06□□□□□ -1.12
PCDHGC4-201ENST00000306593 INSL3P51460 131 aa8.06□□□□□ -1.12
PCDHGC4-201ENST00000306593 MAPKAPK5-AS1Q8N8E1 139 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms