RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 IGKCP01834 107 aa10.45□□□□□ -0.74
SHCBP1-201ENST00000303383 RHOHQ15669 191 aa10.45□□□□□ -0.74
SHCBP1-201ENST00000303383 TRAV4A0A0B4J268 109 aa10.44□□□□□ -0.74
SHCBP1-201ENST00000303383 UFSP1Q6NVU6 142 aa10.44□□□□□ -0.74
SHCBP1-201ENST00000303383 IL17DQ8TAD2 202 aa10.44□□□□□ -0.74
SHCBP1-201ENST00000303383 RPL39P62891 51 aaKnown RBP10.44□□□□□ -0.74
SHCBP1-201ENST00000303383 Q6ZSN1 163 aa10.44□□□□□ -0.74
SHCBP1-201ENST00000303383 EDA2RQ9HAV5 297 aa10.44□□□□□ -0.74
SHCBP1-201ENST00000303383 DNAJC30Q96LL9 226 aa10.43□□□□□ -0.74
SHCBP1-201ENST00000303383 SLC25A34Q6PIV7 304 aa10.43□□□□□ -0.74
SHCBP1-201ENST00000303383 STPG4Q8N801 248 aa10.43□□□□□ -0.74
SHCBP1-201ENST00000303383 MRPL35Q9NZE8 188 aaKnown RBP10.43□□□□□ -0.74
SHCBP1-201ENST00000303383 A0A087WX48 190 aa10.43□□□□□ -0.74
SHCBP1-201ENST00000303383 NEXN-AS1Q8NBZ9 246 aa10.43□□□□□ -0.74
SHCBP1-201ENST00000303383 PHLDA1Q8WV24 401 aaPredicted RBP10.43□□□□□ -0.74
SHCBP1-201ENST00000303383 TRGV4A0A0C4DH28 118 aa10.42□□□□□ -0.74
SHCBP1-201ENST00000303383 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
SHCBP1-201ENST00000303383 DEFB135Q30KP9 77 aa10.42□□□□□ -0.74
SHCBP1-201ENST00000303383 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
SHCBP1-201ENST00000303383 TSHBP01222 138 aa10.42□□□□□ -0.74
SHCBP1-201ENST00000303383 ZNRF2Q8NHG8 242 aa10.42□□□□□ -0.74
SHCBP1-201ENST00000303383 NMUP48645 174 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 CKS1BP61024 79 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 TMEM141Q96I45 108 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 IGHV3-38A0A0C4DH36 116 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 DEFB130BP0DP73 79 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 DEFB130AP0DP74 79 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 PLNP26678 52 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 OXLD1Q5BKU9 147 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 KIR2DL5BQ8NHK3 375 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 BAALCQ8WXS3 180 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 MAST4O15021 2626 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 K7EQD1 137 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 SS18L2Q9UHA2 77 aa10.41□□□□□ -0.74
SHCBP1-201ENST00000303383 F8VRH5 84 aa10.4□□□□□ -0.74
SHCBP1-201ENST00000303383 VCX2Q9H322 139 aa10.4□□□□□ -0.74
SHCBP1-201ENST00000303383 COX11Q9Y6N1 276 aa10.4□□□□□ -0.74
SHCBP1-201ENST00000303383 SMIM9A6NGZ8 99 aa10.4□□□□□ -0.74
SHCBP1-201ENST00000303383 PRIMA1Q86XR5 153 aa10.4□□□□□ -0.74
SHCBP1-201ENST00000303383 OVOL2Q9BRP0 275 aa10.4□□□□□ -0.74
SHCBP1-201ENST00000303383 SCGB1A1P11684 91 aa10.39□□□□□ -0.75
SHCBP1-201ENST00000303383 ZC2HC1BQ5TFG8 222 aa10.39□□□□□ -0.75
SHCBP1-201ENST00000303383 C20orf203Q8NBC4 194 aa10.39□□□□□ -0.75
SHCBP1-201ENST00000303383 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
SHCBP1-201ENST00000303383 Q9UF83 564 aa10.39□□□□□ -0.75
SHCBP1-201ENST00000303383 PLAC8L1A1L4L8 177 aa10.39□□□□□ -0.75
SHCBP1-201ENST00000303383 TRBV7-3A0A075B6L6 115 aa10.39□□□□□ -0.75
SHCBP1-201ENST00000303383 PRSS29PA6NIE9 313 aa10.39□□□□□ -0.75
SHCBP1-201ENST00000303383 STAB1Q9NY15 2570 aa10.39□□□□□ -0.75
SHCBP1-201ENST00000303383 PMVKQ15126 192 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 TRBV10-1A0A0K0K1A3 114 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 GAGE12JA6NER3 117 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 GAGE4Q13068 117 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 GAGE5Q13069 117 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 OR11H2Q8NH07 326 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 IGHV4-30-4P0DP06 118 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 PAPPA-AS1Q5QFB9 102 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 SLC25A29Q8N8R3 303 aa10.38□□□□□ -0.75
SHCBP1-201ENST00000303383 IGIPA6NJ69 53 aa10.37□□□□□ -0.75
SHCBP1-201ENST00000303383 WIPF1O43516 503 aa10.37□□□□□ -0.75
SHCBP1-201ENST00000303383 COX8AP10176 69 aa10.37□□□□□ -0.75
SHCBP1-201ENST00000303383 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
SHCBP1-201ENST00000303383 VAMP3Q15836 100 aa10.36□□□□□ -0.75
SHCBP1-201ENST00000303383 X6R8D5 127 aa10.36□□□□□ -0.75
SHCBP1-201ENST00000303383 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
SHCBP1-201ENST00000303383 SMAGPQ0VAQ4 97 aa10.35□□□□□ -0.75
SHCBP1-201ENST00000303383 TP73-AS1Q9UF72 201 aa10.35□□□□□ -0.75
SHCBP1-201ENST00000303383 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
SHCBP1-201ENST00000303383 OPRPNQ99935 248 aaPredicted RBP10.34□□□□□ -0.75
SHCBP1-201ENST00000303383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.34□□□□□ -0.75
SHCBP1-201ENST00000303383 IGKV2-29A2NJV5 120 aaPredicted RBP10.34□□□□□ -0.75
SHCBP1-201ENST00000303383 DEFB4AO15263 64 aa10.34□□□□□ -0.75
SHCBP1-201ENST00000303383 TMEM97Q5BJF2 176 aa10.34□□□□□ -0.75
SHCBP1-201ENST00000303383 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
SHCBP1-201ENST00000303383 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
SHCBP1-201ENST00000303383 HHLA3Q9XRX5 114 aa10.34□□□□□ -0.75
SHCBP1-201ENST00000303383 TRBV6-4A0A1B0GX49 114 aa10.34□□□□□ -0.75
SHCBP1-201ENST00000303383 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
SHCBP1-201ENST00000303383 COL6A5A8TX70 2615 aa10.33□□□□□ -0.76
SHCBP1-201ENST00000303383 M0QXV9 152 aa10.33□□□□□ -0.76
SHCBP1-201ENST00000303383 HINT1P49773 126 aaPredicted RBP10.33□□□□□ -0.76
SHCBP1-201ENST00000303383 NBEAL2Q6ZNJ1 2754 aa10.33□□□□□ -0.76
SHCBP1-201ENST00000303383 TSPAN13O95857 204 aa10.32□□□□□ -0.76
SHCBP1-201ENST00000303383 HERVK_113P61574 105 aa10.32□□□□□ -0.76
SHCBP1-201ENST00000303383 TRAV8-6A0A0B4J262 113 aa10.32□□□□□ -0.76
SHCBP1-201ENST00000303383 TMEM170BQ5T4T1 132 aa10.32□□□□□ -0.76
SHCBP1-201ENST00000303383 LYRM9A8MSI8 78 aa10.32□□□□□ -0.76
SHCBP1-201ENST00000303383 G3V4G9 280 aa10.32□□□□□ -0.76
SHCBP1-201ENST00000303383 IGHV4-28A0A0C4DH34 117 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 PCP2Q8IVA1 136 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 CHCHD7Q9BUK0 85 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 GTSF1LQ9H1H1 148 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 SPANXA1Q9NS26 97 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 IGLV4-3A0A075B6K6 122 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 UBE2L6O14933 153 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 MIFP14174 115 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 CEMP1Q6PRD7 247 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms