RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 NPSP0C0P6 89 aa8.58□□□□□ -1.04
TPM3-202ENST00000302206 PLNP26678 52 aa8.58□□□□□ -1.04
TPM3-202ENST00000302206 LINC00612Q8N6U2 182 aa8.58□□□□□ -1.04
TPM3-202ENST00000302206 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
TPM3-202ENST00000302206 DKK2Q9UBU2 259 aa8.58□□□□□ -1.04
TPM3-202ENST00000302206 F8VRH5 84 aa8.57□□□□□ -1.04
TPM3-202ENST00000302206 P0DMU3 169 aa8.57□□□□□ -1.04
TPM3-202ENST00000302206 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
TPM3-202ENST00000302206 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
TPM3-202ENST00000302206 BAALCQ8WXS3 180 aa8.57□□□□□ -1.04
TPM3-202ENST00000302206 ZNF479Q96JC4 524 aa8.57□□□□□ -1.04
TPM3-202ENST00000302206 X6R8D5 127 aa8.57□□□□□ -1.04
TPM3-202ENST00000302206 K7EQD1 137 aa8.56□□□□□ -1.04
TPM3-202ENST00000302206 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
TPM3-202ENST00000302206 SLC25A34Q6PIV7 304 aa8.56□□□□□ -1.04
TPM3-202ENST00000302206 MRPS16Q9Y3D3 137 aaKnown RBP8.56□□□□□ -1.04
TPM3-202ENST00000302206 CHTOPQ9Y3Y2 248 aaKnown RBP8.56□□□□□ -1.04
TPM3-202ENST00000302206 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
TPM3-202ENST00000302206 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 TRBV6-4A0A1B0GX49 114 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 GAGE12BA1L429 117 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 GAGE7O76087 117 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 GAGE12FP0CL80 117 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 GAGE12GP0CL81 117 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 GAGE12IP0CL82 117 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 COX8AP10176 69 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 HNRNPA3P51991 378 aaKnown RBP8.55□□□□□ -1.04
TPM3-202ENST00000302206 CRYBA4P53673 196 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 RPL36AP83881 106 aaKnown RBP8.55□□□□□ -1.04
TPM3-202ENST00000302206 EGFEM1PQ0D2K5 195 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 PMVKQ15126 192 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 PAPPA-AS1Q5QFB9 102 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 RPL36ALQ969Q0 106 aaKnown RBP8.55□□□□□ -1.04
TPM3-202ENST00000302206 MRPL35Q9NZE8 188 aaKnown RBP8.55□□□□□ -1.04
TPM3-202ENST00000302206 HHLA3Q9XRX5 114 aa8.55□□□□□ -1.04
TPM3-202ENST00000302206 TRBV7-3A0A075B6L6 115 aa8.54□□□□□ -1.04
TPM3-202ENST00000302206 PRSS29PA6NIE9 313 aa8.54□□□□□ -1.04
TPM3-202ENST00000302206 LYRM9A8MSI8 78 aa8.54□□□□□ -1.04
TPM3-202ENST00000302206 A8MZ25 164 aa8.54□□□□□ -1.04
TPM3-202ENST00000302206 M0R143 59 aa8.54□□□□□ -1.04
TPM3-202ENST00000302206 DLEU1O43261 78 aa8.54□□□□□ -1.04
TPM3-202ENST00000302206 RPL39P62891 51 aaKnown RBP8.54□□□□□ -1.04
TPM3-202ENST00000302206 COTL1Q14019 142 aa8.54□□□□□ -1.04
TPM3-202ENST00000302206 ANKRD39Q53RE8 183 aa8.54□□□□□ -1.04
TPM3-202ENST00000302206 DAZ4Q86SG3 579 aaKnown RBP8.54□□□□□ -1.04
TPM3-202ENST00000302206 DAZ3Q9NR90 486 aaKnown RBP8.54□□□□□ -1.04
TPM3-202ENST00000302206 SLC25A29Q8N8R3 303 aa8.53□□□□□ -1.04
TPM3-202ENST00000302206 CHCHD7Q9BUK0 85 aa8.53□□□□□ -1.04
TPM3-202ENST00000302206 CST9LQ9H4G1 147 aa8.53□□□□□ -1.04
TPM3-202ENST00000302206 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
TPM3-202ENST00000302206 Q9UF83 564 aa8.53□□□□□ -1.04
TPM3-202ENST00000302206 IGHV4-30-4P0DP06 118 aa8.52□□□□□ -1.05
TPM3-202ENST00000302206 MIFP14174 115 aa8.52□□□□□ -1.05
TPM3-202ENST00000302206 UBE2D3P61077 147 aa8.52□□□□□ -1.05
TPM3-202ENST00000302206 UBE2D2P62837 147 aa8.52□□□□□ -1.05
TPM3-202ENST00000302206 CTAG1AP78358 180 aa8.52□□□□□ -1.05
TPM3-202ENST00000302206 STPG4Q8N801 248 aa8.52□□□□□ -1.05
TPM3-202ENST00000302206 ZNRF2Q8NHG8 242 aa8.52□□□□□ -1.05
TPM3-202ENST00000302206 RNF183Q96D59 192 aa8.52□□□□□ -1.05
TPM3-202ENST00000302206 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.05
TPM3-202ENST00000302206 TRGV4A0A0C4DH28 118 aa8.51□□□□□ -1.05
TPM3-202ENST00000302206 SIVA1O15304 175 aa8.51□□□□□ -1.05
TPM3-202ENST00000302206 FGF6P10767 208 aa8.51□□□□□ -1.05
TPM3-202ENST00000302206 FHL2Q14192 279 aa8.51□□□□□ -1.05
TPM3-202ENST00000302206 ZC2HC1BQ5TFG8 222 aa8.51□□□□□ -1.05
TPM3-202ENST00000302206 BOD1L2Q8IYS8 172 aa8.51□□□□□ -1.05
TPM3-202ENST00000302206 OR11H2Q8NH07 326 aa8.51□□□□□ -1.05
TPM3-202ENST00000302206 C2orf88Q9BSF0 95 aa8.51□□□□□ -1.05
TPM3-202ENST00000302206 SNHG12Q9BXW3 62 aa8.51□□□□□ -1.05
TPM3-202ENST00000302206 IGLV4-3A0A075B6K6 122 aa8.5□□□□□ -1.05
TPM3-202ENST00000302206 SMAGPQ0VAQ4 97 aa8.5□□□□□ -1.05
TPM3-202ENST00000302206 DEFB135Q30KP9 77 aa8.5□□□□□ -1.05
TPM3-202ENST00000302206 PRADC1Q9BSG0 188 aa8.5□□□□□ -1.05
TPM3-202ENST00000302206 GTSF1LQ9H1H1 148 aa8.5□□□□□ -1.05
TPM3-202ENST00000302206 IGLV4-69A0A075B6H9 119 aa8.49□□□□□ -1.05
TPM3-202ENST00000302206 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
TPM3-202ENST00000302206 EMP1P54849 157 aa8.49□□□□□ -1.05
TPM3-202ENST00000302206 KRTAP10-11P60412 298 aa8.49□□□□□ -1.05
TPM3-202ENST00000302206 MRPS36P82909 103 aaKnown RBP8.49□□□□□ -1.05
TPM3-202ENST00000302206 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
TPM3-202ENST00000302206 DEFB104AQ8WTQ1 72 aa8.49□□□□□ -1.05
TPM3-202ENST00000302206 PHLDA1Q8WV24 401 aaPredicted RBP8.49□□□□□ -1.05
TPM3-202ENST00000302206 AMELXQ99217 191 aa8.49□□□□□ -1.05
TPM3-202ENST00000302206 UBE2D4Q9Y2X8 147 aa8.49□□□□□ -1.05
TPM3-202ENST00000302206 IGHV4-28A0A0C4DH34 117 aa8.48□□□□□ -1.05
TPM3-202ENST00000302206 GAGE12JA6NER3 117 aa8.48□□□□□ -1.05
TPM3-202ENST00000302206 GAGE1Q13065 139 aa8.48□□□□□ -1.05
TPM3-202ENST00000302206 GAGE4Q13068 117 aa8.48□□□□□ -1.05
TPM3-202ENST00000302206 GAGE5Q13069 117 aa8.48□□□□□ -1.05
TPM3-202ENST00000302206 GAGE13Q4V321 117 aa8.48□□□□□ -1.05
TPM3-202ENST00000302206 TMEM97Q5BJF2 176 aa8.48□□□□□ -1.05
TPM3-202ENST00000302206 Q8NAQ8 132 aa8.48□□□□□ -1.05
TPM3-202ENST00000302206 VCX2Q9H322 139 aa8.48□□□□□ -1.05
TPM3-202ENST00000302206 IGHV3-38A0A0C4DH36 116 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 TEX48A0A1B0GUV7 120 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 H7C423 109 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 DEFB130BP0DP73 79 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 DEFB130AP0DP74 79 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 NMUP48645 174 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms