RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 RBMY1EA6NEQ0 496 aaKnown RBP12.19□□□□□ -0.46
PGAP3-201ENST00000300658 CRLF1O75462 422 aa12.19□□□□□ -0.46
PGAP3-201ENST00000300658 RBMY1DP0C7P1 496 aaKnown RBP12.19□□□□□ -0.46
PGAP3-201ENST00000300658 C9orf85Q96MD7 179 aa12.19□□□□□ -0.46
PGAP3-201ENST00000300658 A0A1W2PRX2 142 aa12.18□□□□□ -0.46
PGAP3-201ENST00000300658 RHODO00212 210 aa12.18□□□□□ -0.46
PGAP3-201ENST00000300658 TRBV7-3A0A075B6L6 115 aa12.18□□□□□ -0.46
PGAP3-201ENST00000300658 IGHV1OR15-1A0A075B7D0 117 aa12.18□□□□□ -0.46
PGAP3-201ENST00000300658 TEN1Q86WV5 123 aa12.18□□□□□ -0.46
PGAP3-201ENST00000300658 LINC01549A6NIU2 74 aa12.17□□□□□ -0.46
PGAP3-201ENST00000300658 DUSP14O95147 198 aaKnown RBP12.17□□□□□ -0.46
PGAP3-201ENST00000300658 GAGE2BQ13066 116 aa12.17□□□□□ -0.46
PGAP3-201ENST00000300658 GAGE2EQ4V326 116 aa12.17□□□□□ -0.46
PGAP3-201ENST00000300658 GAGE2DQ9UEU5 116 aa12.17□□□□□ -0.46
PGAP3-201ENST00000300658 CD28P10747 220 aa12.17□□□□□ -0.46
PGAP3-201ENST00000300658 DPM2O94777 84 aa12.17□□□□□ -0.46
PGAP3-201ENST00000300658 DEFB114Q30KQ6 69 aa12.17□□□□□ -0.46
PGAP3-201ENST00000300658 H3BMM0 161 aa12.16□□□□□ -0.46
PGAP3-201ENST00000300658 SUMO4Q6EEV6 95 aa12.16□□□□□ -0.46
PGAP3-201ENST00000300658 MRPL35Q9NZE8 188 aaKnown RBP12.16□□□□□ -0.46
PGAP3-201ENST00000300658 PEMTQ9UBM1 199 aa12.16□□□□□ -0.46
PGAP3-201ENST00000300658 TAL2Q16559 108 aa12.16□□□□□ -0.46
PGAP3-201ENST00000300658 TTC32Q5I0X7 151 aa12.16□□□□□ -0.46
PGAP3-201ENST00000300658 ANKRD29Q8N6D5 301 aa12.15□□□□□ -0.46
PGAP3-201ENST00000300658 WIPF1O43516 503 aa12.15□□□□□ -0.47
PGAP3-201ENST00000300658 HLA-DRB4P13762 266 aa12.15□□□□□ -0.47
PGAP3-201ENST00000300658 FAM74A4Q5TZK3 123 aa12.15□□□□□ -0.47
PGAP3-201ENST00000300658 HLA-DRB4X5D2U9 266 aa12.15□□□□□ -0.47
PGAP3-201ENST00000300658 HTN1P15515 57 aa12.14□□□□□ -0.47
PGAP3-201ENST00000300658 SMR3AQ99954 134 aa12.14□□□□□ -0.47
PGAP3-201ENST00000300658 CRYGDP07320 174 aa12.14□□□□□ -0.47
PGAP3-201ENST00000300658 MAP6D1Q9H9H5 199 aa12.14□□□□□ -0.47
PGAP3-201ENST00000300658 ATP5LO75964 103 aa12.13□□□□□ -0.47
PGAP3-201ENST00000300658 IFITM1P13164 125 aa12.13□□□□□ -0.47
PGAP3-201ENST00000300658 ZNF256Q9Y2P7 627 aaPredicted RBP12.13□□□□□ -0.47
PGAP3-201ENST00000300658 A8MTW9 85 aa12.13□□□□□ -0.47
PGAP3-201ENST00000300658 F5H697 171 aa12.13□□□□□ -0.47
PGAP3-201ENST00000300658 DYNLRB2Q8TF09 96 aa12.13□□□□□ -0.47
PGAP3-201ENST00000300658 JMJD1CQ15652 2540 aa12.13□□□□□ -0.47
PGAP3-201ENST00000300658 LINC01006Q8NI28 216 aa12.12□□□□□ -0.47
PGAP3-201ENST00000300658 TOMM6Q96B49 74 aa12.12□□□□□ -0.47
PGAP3-201ENST00000300658 SETXQ7Z333 2677 aaKnown RBP12.12□□□□□ -0.47
PGAP3-201ENST00000300658 SMIM9A6NGZ8 99 aa12.12□□□□□ -0.47
PGAP3-201ENST00000300658 SNCGO76070 127 aa12.12□□□□□ -0.47
PGAP3-201ENST00000300658 TCL1BO95988 128 aa12.12□□□□□ -0.47
PGAP3-201ENST00000300658 POLR2KP53803 58 aaKnown RBP12.12□□□□□ -0.47
PGAP3-201ENST00000300658 MEIG1Q5JSS6 88 aa12.12□□□□□ -0.47
PGAP3-201ENST00000300658 ORMDL2Q53FV1 153 aa12.11□□□□□ -0.47
PGAP3-201ENST00000300658 NOTCH3Q9UM47 2321 aa12.11□□□□□ -0.47
PGAP3-201ENST00000300658 CCL24O00175 119 aa12.11□□□□□ -0.47
PGAP3-201ENST00000300658 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
PGAP3-201ENST00000300658 A8MWV9 139 aa12.1□□□□□ -0.47
PGAP3-201ENST00000300658 C2orf66Q6UXQ4 117 aa12.1□□□□□ -0.47
PGAP3-201ENST00000300658 SCGB3A1Q96QR1 104 aa12.1□□□□□ -0.47
PGAP3-201ENST00000300658 HIVEP2P31629 2446 aa12.1□□□□□ -0.47
PGAP3-201ENST00000300658 OTOGQ6ZRI0 2925 aa12.1□□□□□ -0.47
PGAP3-201ENST00000300658 TRAV2A0A0B4J234 112 aa12.1□□□□□ -0.47
PGAP3-201ENST00000300658 MYMXA0A1B0GTQ4 84 aa12.09□□□□□ -0.47
PGAP3-201ENST00000300658 M0QY20 66 aa12.09□□□□□ -0.47
PGAP3-201ENST00000300658 TMEM262E9PQX1 116 aa12.09□□□□□ -0.47
PGAP3-201ENST00000300658 SDHAF1A6NFY7 115 aa12.08□□□□□ -0.48
PGAP3-201ENST00000300658 RNASE1P07998 156 aaKnown RBP12.08□□□□□ -0.48
PGAP3-201ENST00000300658 ODF3L2Q3SX64 289 aa12.08□□□□□ -0.48
PGAP3-201ENST00000300658 PPP1R17O96001 155 aa12.08□□□□□ -0.48
PGAP3-201ENST00000300658 ZNF56Q15929 161 aa12.08□□□□□ -0.48
PGAP3-201ENST00000300658 PROK1P58294 105 aa12.07□□□□□ -0.48
PGAP3-201ENST00000300658 UBE2D3P61077 147 aa12.07□□□□□ -0.48
PGAP3-201ENST00000300658 UBE2D2P62837 147 aa12.07□□□□□ -0.48
PGAP3-201ENST00000300658 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
PGAP3-201ENST00000300658 TSHBP01222 138 aa12.07□□□□□ -0.48
PGAP3-201ENST00000300658 RPL39P62891 51 aaKnown RBP12.07□□□□□ -0.48
PGAP3-201ENST00000300658 BAALCQ8WXS3 180 aa12.07□□□□□ -0.48
PGAP3-201ENST00000300658 TRGV11A0A075B6L2 103 aa12.06□□□□□ -0.48
PGAP3-201ENST00000300658 IGHV3-73A0A0B4J1V6 119 aa12.06□□□□□ -0.48
PGAP3-201ENST00000300658 Q9UF83 564 aa12.05□□□□□ -0.48
PGAP3-201ENST00000300658 LOC107984640A0A0U1RRK4 108 aa12.05□□□□□ -0.48
PGAP3-201ENST00000300658 VCYO14598 125 aa12.05□□□□□ -0.48
PGAP3-201ENST00000300658 C16orf95Q9H693 158 aa12.05□□□□□ -0.48
PGAP3-201ENST00000300658 NACAE9PAV3 2078 aa12.05□□□□□ -0.48
PGAP3-201ENST00000300658 TRAV12-1A0A0B4J245 112 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 TRBV6-5A0A0K0K1A5 114 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 TRBV27A0A0K0K1C4 114 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 P0DMU3 169 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 PLEKHB2Q96CS7 222 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 TP53TG1Q9Y2A0 90 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 H7C1H1 209 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 SBSPONQ8IVN8 264 aa12.04□□□□□ -0.48
PGAP3-201ENST00000300658 F8VRH5 84 aa12.03□□□□□ -0.48
PGAP3-201ENST00000300658 IGIPA6NJ69 53 aa12.03□□□□□ -0.48
PGAP3-201ENST00000300658 UBE2D1P51668 147 aa12.03□□□□□ -0.48
PGAP3-201ENST00000300658 SRSF9Q13242 221 aaKnown RBP eCLIP12.03□□□□□ -0.48
PGAP3-201ENST00000300658 XCL2Q9UBD3 114 aa12.03□□□□□ -0.48
PGAP3-201ENST00000300658 LINC01587Q99440 93 aa12.02□□□□□ -0.48
PGAP3-201ENST00000300658 ADARB2-AS1A8MUL3 147 aa12.02□□□□□ -0.49
PGAP3-201ENST00000300658 SCGB1C2P0DMR2 95 aa12.02□□□□□ -0.49
PGAP3-201ENST00000300658 Q6ZSN1 163 aa12.02□□□□□ -0.49
PGAP3-201ENST00000300658 C9JAW5 83 aa12.02□□□□□ -0.49
PGAP3-201ENST00000300658 HILS1P60008 231 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms