RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZMAT4Q9H898 229 aa11.16□□□□□ -0.62
HERPUD1-201ENST00000300302 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
HERPUD1-201ENST00000300302 CTAG1AP78358 180 aa11.15□□□□□ -0.62
HERPUD1-201ENST00000300302 FHL2Q14192 279 aa11.15□□□□□ -0.62
HERPUD1-201ENST00000300302 ODF1Q14990 250 aa11.15□□□□□ -0.62
HERPUD1-201ENST00000300302 TIMM17AQ99595 171 aa11.15□□□□□ -0.62
HERPUD1-201ENST00000300302 MIEN1Q9BRT3 115 aa11.15□□□□□ -0.62
HERPUD1-201ENST00000300302 PRADC1Q9BSG0 188 aa11.15□□□□□ -0.62
HERPUD1-201ENST00000300302 DKK2Q9UBU2 259 aa11.15□□□□□ -0.62
HERPUD1-201ENST00000300302 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.63
HERPUD1-201ENST00000300302 IGIPA6NJ69 53 aa11.15□□□□□ -0.63
HERPUD1-201ENST00000300302 DAZ4Q86SG3 579 aaKnown RBP11.15□□□□□ -0.63
HERPUD1-201ENST00000300302 PHLDA1Q8WV24 401 aaPredicted RBP11.15□□□□□ -0.63
HERPUD1-201ENST00000300302 DAZ3Q9NR90 486 aaKnown RBP11.15□□□□□ -0.63
HERPUD1-201ENST00000300302 A0A087WX48 190 aa11.14□□□□□ -0.63
HERPUD1-201ENST00000300302 PKD1L1Q8TDX9 2849 aa11.13□□□□□ -0.63
HERPUD1-201ENST00000300302 DEFB4AO15263 64 aa11.13□□□□□ -0.63
HERPUD1-201ENST00000300302 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
HERPUD1-201ENST00000300302 IGHV3-38A0A0C4DH36 116 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 hDV102S1A0JD36 115 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 GAGE12JA6NER3 117 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 SPART-AS1P0CW21 52 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 UBE2D3P61077 147 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 UBE2D2P62837 147 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 GAGE1Q13065 139 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 GAGE4Q13068 117 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 GAGE5Q13069 117 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 GAGE13Q4V321 117 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 HHLA3Q9XRX5 114 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 DPM2O94777 84 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 IGKCP01834 107 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 IGLC3P0DOY3 106 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 DAD1P61803 113 aa11.12□□□□□ -0.63
HERPUD1-201ENST00000300302 PLNP26678 52 aa11.11□□□□□ -0.63
HERPUD1-201ENST00000300302 TEX48A0A1B0GUV7 120 aa11.1□□□□□ -0.63
HERPUD1-201ENST00000300302 F8VRH5 84 aa11.1□□□□□ -0.63
HERPUD1-201ENST00000300302 PAPPA-AS1Q5QFB9 102 aa11.1□□□□□ -0.63
HERPUD1-201ENST00000300302 CHCHD7Q9BUK0 85 aa11.1□□□□□ -0.63
HERPUD1-201ENST00000300302 MRPL35Q9NZE8 188 aaKnown RBP11.1□□□□□ -0.63
HERPUD1-201ENST00000300302 CHTOPQ9Y3Y2 248 aaKnown RBP11.1□□□□□ -0.63
HERPUD1-201ENST00000300302 PMVKQ15126 192 aa11.1□□□□□ -0.63
HERPUD1-201ENST00000300302 NBEAL2Q6ZNJ1 2754 aa11.1□□□□□ -0.63
HERPUD1-201ENST00000300302 PYGO1Q9Y3Y4 419 aa11.1□□□□□ -0.63
HERPUD1-201ENST00000300302 PRSS29PA6NIE9 313 aa11.09□□□□□ -0.63
HERPUD1-201ENST00000300302 UQCR10Q9UDW1 63 aa11.09□□□□□ -0.63
HERPUD1-201ENST00000300302 PRO0255Q9UI72 69 aa11.09□□□□□ -0.63
HERPUD1-201ENST00000300302 DNAH3Q8TD57 4116 aa11.09□□□□□ -0.63
HERPUD1-201ENST00000300302 PRB2P02812 416 aaPredicted RBP11.08□□□□□ -0.64
HERPUD1-201ENST00000300302 NPSP0C0P6 89 aa11.08□□□□□ -0.64
HERPUD1-201ENST00000300302 GTSF1LQ9H1H1 148 aa11.08□□□□□ -0.64
HERPUD1-201ENST00000300302 SPANXA1Q9NS26 97 aa11.08□□□□□ -0.64
HERPUD1-201ENST00000300302 DNHD1Q96M86 4753 aa11.08□□□□□ -0.64
HERPUD1-201ENST00000300302 LOC100131303A0A0U1RQF7 123 aa11.08□□□□□ -0.64
HERPUD1-201ENST00000300302 CRYBA4P53673 196 aa11.08□□□□□ -0.64
HERPUD1-201ENST00000300302 CELA1Q9UNI1 258 aa11.08□□□□□ -0.64
HERPUD1-201ENST00000300302 ATP5G1P05496 136 aa11.07□□□□□ -0.64
HERPUD1-201ENST00000300302 CST9LQ9H4G1 147 aa11.07□□□□□ -0.64
HERPUD1-201ENST00000300302 KPRPQ5T749 579 aaPredicted RBP11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 VCX2Q9H322 139 aa11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 RETNQ9HD89 108 aa11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 IGLV4-3A0A075B6K6 122 aa11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 IGKV2-29A2NJV5 120 aaPredicted RBP11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 EREGO14944 169 aa11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 SMAGPQ0VAQ4 97 aa11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 STPG4Q8N801 248 aa11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
HERPUD1-201ENST00000300302 PAX4O43316 350 aa11.05□□□□□ -0.64
HERPUD1-201ENST00000300302 LINC00694P0DN24 101 aa11.05□□□□□ -0.64
HERPUD1-201ENST00000300302 GYPEP15421 78 aa11.05□□□□□ -0.64
HERPUD1-201ENST00000300302 TMEM97Q5BJF2 176 aa11.05□□□□□ -0.64
HERPUD1-201ENST00000300302 MRPL52Q86TS9 123 aaKnown RBP11.05□□□□□ -0.64
HERPUD1-201ENST00000300302 SNHG12Q9BXW3 62 aa11.05□□□□□ -0.64
HERPUD1-201ENST00000300302 ZC2HC1BQ5TFG8 222 aa11.04□□□□□ -0.64
HERPUD1-201ENST00000300302 NTM-AS1Q6ZSK4 140 aa11.04□□□□□ -0.64
HERPUD1-201ENST00000300302 OPRPNQ99935 248 aaPredicted RBP11.04□□□□□ -0.64
HERPUD1-201ENST00000300302 TIMM21Q9BVV7 248 aa11.04□□□□□ -0.64
HERPUD1-201ENST00000300302 C11orf68Q9H3H3 251 aaKnown RBP11.04□□□□□ -0.64
HERPUD1-201ENST00000300302 TRBV25-1A0A075B6N4 114 aa11.04□□□□□ -0.64
HERPUD1-201ENST00000300302 KRTAP21-3Q3LHN1 58 aa11.04□□□□□ -0.64
HERPUD1-201ENST00000300302 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
HERPUD1-201ENST00000300302 DGAT2L7PQ6IED9 249 aa11.03□□□□□ -0.64
HERPUD1-201ENST00000300302 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
HERPUD1-201ENST00000300302 UBE2L6O14933 153 aa11.02□□□□□ -0.64
HERPUD1-201ENST00000300302 SLC25A34Q6PIV7 304 aa11.02□□□□□ -0.64
HERPUD1-201ENST00000300302 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.64
HERPUD1-201ENST00000300302 ATP6V0E2Q8NHE4 81 aa11.02□□□□□ -0.64
HERPUD1-201ENST00000300302 C2orf88Q9BSF0 95 aa11.02□□□□□ -0.64
HERPUD1-201ENST00000300302 F5H768 121 aa11.02□□□□□ -0.65
HERPUD1-201ENST00000300302 H7C423 109 aa11.02□□□□□ -0.65
HERPUD1-201ENST00000300302 K7EIL1 84 aa11.02□□□□□ -0.65
HERPUD1-201ENST00000300302 M0R143 59 aa11.02□□□□□ -0.65
HERPUD1-201ENST00000300302 COX8AP10176 69 aa11.02□□□□□ -0.65
HERPUD1-201ENST00000300302 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
HERPUD1-201ENST00000300302 LBHQ53QV2 105 aaPredicted RBP11.02□□□□□ -0.65
HERPUD1-201ENST00000300302 DEFB121Q5J5C9 76 aa11.02□□□□□ -0.65
HERPUD1-201ENST00000300302 AMELXQ99217 191 aa11.02□□□□□ -0.65
HERPUD1-201ENST00000300302 IGLV4-69A0A075B6H9 119 aa11.01□□□□□ -0.65
HERPUD1-201ENST00000300302 MRPS36P82909 103 aaKnown RBP11.01□□□□□ -0.65
HERPUD1-201ENST00000300302 SBSPONQ8IVN8 264 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms