RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 IGHV3-38A0A0C4DH36 116 aa17.21■□□□□ 0.35
GTF2A1-201ENST00000298173 HBDP02042 147 aa17.21■□□□□ 0.35
GTF2A1-201ENST00000298173 GYPEP15421 78 aa17.21■□□□□ 0.35
GTF2A1-201ENST00000298173 HTN3P15516 51 aa17.21■□□□□ 0.35
GTF2A1-201ENST00000298173 PHLDA1Q8WV24 401 aaPredicted RBP17.21■□□□□ 0.35
GTF2A1-201ENST00000298173 TRAV26-1A0A087WT03 109 aa17.2■□□□□ 0.34
GTF2A1-201ENST00000298173 A0A0J9YY99 117 aa17.19■□□□□ 0.34
GTF2A1-201ENST00000298173 NUDT3O95989 172 aa17.19■□□□□ 0.34
GTF2A1-201ENST00000298173 LEPROTL1O95214 131 aa17.18■□□□□ 0.34
GTF2A1-201ENST00000298173 OR10D4PQ8NGN7 298 aa17.17■□□□□ 0.34
GTF2A1-201ENST00000298173 BTF3P20290 206 aaKnown RBP17.16■□□□□ 0.34
GTF2A1-201ENST00000298173 COTL1Q14019 142 aa17.16■□□□□ 0.34
GTF2A1-201ENST00000298173 H3BNG1 76 aa17.16■□□□□ 0.34
GTF2A1-201ENST00000298173 NTM-AS1Q6ZSK4 140 aa17.16■□□□□ 0.34
GTF2A1-201ENST00000298173 LINC00173Q6ZV60 143 aa17.16■□□□□ 0.34
GTF2A1-201ENST00000298173 TOMM6Q96B49 74 aa17.16■□□□□ 0.34
GTF2A1-201ENST00000298173 G0S2P27469 103 aa17.15■□□□□ 0.34
GTF2A1-201ENST00000298173 C2orf66Q6UXQ4 117 aa17.15■□□□□ 0.34
GTF2A1-201ENST00000298173 C20orf203Q8NBC4 194 aa17.15■□□□□ 0.34
GTF2A1-201ENST00000298173 CHCHD7Q9BUK0 85 aa17.15■□□□□ 0.34
GTF2A1-201ENST00000298173 GTSF1LQ9H1H1 148 aa17.15■□□□□ 0.34
GTF2A1-201ENST00000298173 DEFB131BA0A096LNP1 70 aa17.14■□□□□ 0.33
GTF2A1-201ENST00000298173 ATP6V0E2Q8NHE4 81 aa17.13■□□□□ 0.33
GTF2A1-201ENST00000298173 HSPB8Q9UJY1 196 aa17.13■□□□□ 0.33
GTF2A1-201ENST00000298173 MRPL23Q16540 153 aaKnown RBP17.12■□□□□ 0.33
GTF2A1-201ENST00000298173 CYSLTR1Q9Y271 337 aa17.12■□□□□ 0.33
GTF2A1-201ENST00000298173 AKR1D1P51857 326 aa17.11■□□□□ 0.33
GTF2A1-201ENST00000298173 RPL39P62891 51 aaKnown RBP17.11■□□□□ 0.33
GTF2A1-201ENST00000298173 STAB2Q8WWQ8 2551 aa17.11■□□□□ 0.33
GTF2A1-201ENST00000298173 TRAV10A0A0B4J240 114 aa17.1■□□□□ 0.33
GTF2A1-201ENST00000298173 LINC01549A6NIU2 74 aa17.1■□□□□ 0.33
GTF2A1-201ENST00000298173 A0A096LPF7 62 aa17.1■□□□□ 0.33
GTF2A1-201ENST00000298173 C3orf79P0CE67 100 aa17.1■□□□□ 0.33
GTF2A1-201ENST00000298173 ICOSQ9Y6W8 199 aa17.1■□□□□ 0.33
GTF2A1-201ENST00000298173 IGIPA6NJ69 53 aa17.08■□□□□ 0.32
GTF2A1-201ENST00000298173 TMEM97Q5BJF2 176 aa17.08■□□□□ 0.32
GTF2A1-201ENST00000298173 TRBV6-8A0A0A6YYG3 113 aa17.07■□□□□ 0.32
GTF2A1-201ENST00000298173 ERASQ7Z444 233 aa17.07■□□□□ 0.32
GTF2A1-201ENST00000298173 SH2D6Q7Z4S9 175 aa17.07■□□□□ 0.32
GTF2A1-201ENST00000298173 IFI27L1Q96BM0 104 aa17.07■□□□□ 0.32
GTF2A1-201ENST00000298173 ATP5LO75964 103 aa17.07■□□□□ 0.32
GTF2A1-201ENST00000298173 SCGB3A1Q96QR1 104 aa17.07■□□□□ 0.32
GTF2A1-201ENST00000298173 KRTDAPP60985 99 aa17.06■□□□□ 0.32
GTF2A1-201ENST00000298173 MAP1LC3CQ9BXW4 147 aa17.05■□□□□ 0.32
GTF2A1-201ENST00000298173 TRBV25-1A0A075B6N4 114 aa17.04■□□□□ 0.32
GTF2A1-201ENST00000298173 SYS1-DBNDD2H3BUS1 97 aa17.04■□□□□ 0.32
GTF2A1-201ENST00000298173 PYGO1Q9Y3Y4 419 aa17.04■□□□□ 0.32
GTF2A1-201ENST00000298173 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.04■□□□□ 0.32
GTF2A1-201ENST00000298173 IGKV2-29A2NJV5 120 aaPredicted RBP17.04■□□□□ 0.32
GTF2A1-201ENST00000298173 JOSD1Q15040 202 aaPredicted RBP17.04■□□□□ 0.32
GTF2A1-201ENST00000298173 SPATA12Q7Z6I5 190 aa17.04■□□□□ 0.32
GTF2A1-201ENST00000298173 TIMM17AQ99595 171 aa17.04■□□□□ 0.32
GTF2A1-201ENST00000298173 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.03■□□□□ 0.32
GTF2A1-201ENST00000298173 PYY3Q5JQD4 70 aa17.03■□□□□ 0.32
GTF2A1-201ENST00000298173 UBE2D4Q9Y2X8 147 aa17.03■□□□□ 0.32
GTF2A1-201ENST00000298173 Q8N976 141 aa17.02■□□□□ 0.32
GTF2A1-201ENST00000298173 FAM104AQ969W3 186 aa17.02■□□□□ 0.32
GTF2A1-201ENST00000298173 TMEM141Q96I45 108 aa17.02■□□□□ 0.32
GTF2A1-201ENST00000298173 TMEM243Q9BU79 118 aa17.02■□□□□ 0.32
GTF2A1-201ENST00000298173 H7C423 109 aa17.01■□□□□ 0.31
GTF2A1-201ENST00000298173 TIMM21Q9BVV7 248 aa17.01■□□□□ 0.31
GTF2A1-201ENST00000298173 LYPD5Q6UWN5 251 aa17■□□□□ 0.31
GTF2A1-201ENST00000298173 PET117Q6UWS5 81 aa17■□□□□ 0.31
GTF2A1-201ENST00000298173 FBN3Q75N90 2809 aa16.99■□□□□ 0.31
GTF2A1-201ENST00000298173 TIRAPP58753 221 aa16.99■□□□□ 0.31
GTF2A1-201ENST00000298173 MRPL52Q86TS9 123 aaKnown RBP16.99■□□□□ 0.31
GTF2A1-201ENST00000298173 SPANXA1Q9NS26 97 aa16.99■□□□□ 0.31
GTF2A1-201ENST00000298173 NPSP0C0P6 89 aa16.98■□□□□ 0.31
GTF2A1-201ENST00000298173 CEMP1Q6PRD7 247 aaPredicted RBP16.98■□□□□ 0.31
GTF2A1-201ENST00000298173 BAALCQ8WXS3 180 aa16.97■□□□□ 0.31
GTF2A1-201ENST00000298173 OPRPNQ99935 248 aaPredicted RBP16.97■□□□□ 0.31
GTF2A1-201ENST00000298173 CSDC2Q9Y534 153 aaKnown RBP16.97■□□□□ 0.31
GTF2A1-201ENST00000298173 PRSS1P07477 247 aa16.97■□□□□ 0.31
GTF2A1-201ENST00000298173 FGF6P10767 208 aa16.97■□□□□ 0.31
GTF2A1-201ENST00000298173 Q6ZN92 141 aa16.97■□□□□ 0.31
GTF2A1-201ENST00000298173 C15orf53Q8NAA6 179 aa16.97■□□□□ 0.31
GTF2A1-201ENST00000298173 IGLV4-3A0A075B6K6 122 aa16.96■□□□□ 0.31
GTF2A1-201ENST00000298173 LINC01545Q5VT33 79 aa16.96■□□□□ 0.31
GTF2A1-201ENST00000298173 LELP1Q5T871 98 aa16.95■□□□□ 0.3
GTF2A1-201ENST00000298173 TRAV12-1A0A0B4J245 112 aa16.94■□□□□ 0.3
GTF2A1-201ENST00000298173 H0Y8G0 127 aa16.94■□□□□ 0.3
GTF2A1-201ENST00000298173 SCGB1D1O95968 90 aa16.94■□□□□ 0.3
GTF2A1-201ENST00000298173 CHCHD5Q9BSY4 110 aa16.94■□□□□ 0.3
GTF2A1-201ENST00000298173 UBE2L6O14933 153 aa16.94■□□□□ 0.3
GTF2A1-201ENST00000298173 MRPS36P82909 103 aaKnown RBP16.94■□□□□ 0.3
GTF2A1-201ENST00000298173 LGALS9CQ6DKI2 356 aa16.94■□□□□ 0.3
GTF2A1-201ENST00000298173 GAGE6Q13070 117 aa16.93■□□□□ 0.3
GTF2A1-201ENST00000298173 ESRGQ1W209 222 aa16.93■□□□□ 0.3
GTF2A1-201ENST00000298173 AMELXQ99217 191 aa16.93■□□□□ 0.3
GTF2A1-201ENST00000298173 IGLL5B9A064 214 aa16.92■□□□□ 0.3
GTF2A1-201ENST00000298173 SMIM6P0DI80 62 aa16.92■□□□□ 0.3
GTF2A1-201ENST00000298173 SMAGPQ0VAQ4 97 aa16.92■□□□□ 0.3
GTF2A1-201ENST00000298173 ODF1Q14990 250 aa16.92■□□□□ 0.3
GTF2A1-201ENST00000298173 A0A087WX48 190 aa16.91■□□□□ 0.3
GTF2A1-201ENST00000298173 PMVKQ15126 192 aa16.91■□□□□ 0.3
GTF2A1-201ENST00000298173 ZC2HC1BQ5TFG8 222 aa16.91■□□□□ 0.3
GTF2A1-201ENST00000298173 CST9LQ9H4G1 147 aa16.91■□□□□ 0.3
GTF2A1-201ENST00000298173 DYNC2H1Q8NCM8 4307 aaKnown RBP16.91■□□□□ 0.3
GTF2A1-201ENST00000298173 PRSS29PA6NIE9 313 aa16.91■□□□□ 0.3
GTF2A1-201ENST00000298173 ZNF25P17030 456 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms