RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 C12orf74Q32Q52 190 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 ANKRD39Q53RE8 183 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 FAM74A4Q5TZK3 123 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 UFSP1Q6NVU6 142 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 PTTG1IPP53801 180 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 LINC00315P59091 139 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 SEC11AP67812 179 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 DPH3P1Q9H4G8 78 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
CCDC78-201ENST00000293889 NACAE9PAV3 2078 aa12.58□□□□□ -0.4
CCDC78-201ENST00000293889 IGHV3-73A0A0B4J1V6 119 aa12.58□□□□□ -0.4
CCDC78-201ENST00000293889 H0Y8G0 127 aa12.58□□□□□ -0.4
CCDC78-201ENST00000293889 K7EP13 123 aa12.58□□□□□ -0.4
CCDC78-201ENST00000293889 C11orf45Q8TAV5 145 aa12.58□□□□□ -0.4
CCDC78-201ENST00000293889 EDA2RQ9HAV5 297 aa12.58□□□□□ -0.4
CCDC78-201ENST00000293889 MGPP08493 103 aa12.56□□□□□ -0.4
CCDC78-201ENST00000293889 NANOS2P60321 138 aaKnown RBP12.56□□□□□ -0.4
CCDC78-201ENST00000293889 TMEM97Q5BJF2 176 aa12.56□□□□□ -0.4
CCDC78-201ENST00000293889 ZFP2Q6ZN57 461 aa12.56□□□□□ -0.4
CCDC78-201ENST00000293889 NRACQ8N912 160 aa12.56□□□□□ -0.4
CCDC78-201ENST00000293889 RHODO00212 210 aa12.55□□□□□ -0.4
CCDC78-201ENST00000293889 Q6ZVH6 145 aa12.55□□□□□ -0.4
CCDC78-201ENST00000293889 ATP5LO75964 103 aa12.55□□□□□ -0.4
CCDC78-201ENST00000293889 Q6ZSN1 163 aa12.55□□□□□ -0.4
CCDC78-201ENST00000293889 MRAP2Q96G30 205 aa12.55□□□□□ -0.4
CCDC78-201ENST00000293889 F5H697 171 aa12.54□□□□□ -0.4
CCDC78-201ENST00000293889 GAS8-AS1O95177 125 aa12.54□□□□□ -0.4
CCDC78-201ENST00000293889 ATP5G1P05496 136 aa12.54□□□□□ -0.4
CCDC78-201ENST00000293889 FHL2Q14192 279 aa12.54□□□□□ -0.4
CCDC78-201ENST00000293889 ODF1Q14990 250 aa12.54□□□□□ -0.4
CCDC78-201ENST00000293889 ZNF56Q15929 161 aa12.54□□□□□ -0.4
CCDC78-201ENST00000293889 Q6ZTC4 211 aa12.54□□□□□ -0.4
CCDC78-201ENST00000293889 CIDEAO60543 219 aa12.53□□□□□ -0.4
CCDC78-201ENST00000293889 HSD52Q0P140 79 aa12.53□□□□□ -0.4
CCDC78-201ENST00000293889 WWC2-AS2Q96NR7 200 aa12.53□□□□□ -0.4
CCDC78-201ENST00000293889 TRAV26-2A0A0B4J265 109 aa12.52□□□□□ -0.4
CCDC78-201ENST00000293889 HIGD1BQ9P298 99 aa12.52□□□□□ -0.4
CCDC78-201ENST00000293889 TRGV4A0A0C4DH28 118 aa12.51□□□□□ -0.41
CCDC78-201ENST00000293889 HTN3P15516 51 aa12.51□□□□□ -0.41
CCDC78-201ENST00000293889 GATA1P15976 413 aaPredicted RBP12.51□□□□□ -0.41
CCDC78-201ENST00000293889 SUMO4Q6EEV6 95 aa12.51□□□□□ -0.41
CCDC78-201ENST00000293889 HHLA3Q9XRX5 114 aa12.51□□□□□ -0.41
CCDC78-201ENST00000293889 K7EMI3 77 aa12.51□□□□□ -0.41
CCDC78-201ENST00000293889 F5H768 121 aa12.5□□□□□ -0.41
CCDC78-201ENST00000293889 H3BRM9 83 aa12.5□□□□□ -0.41
CCDC78-201ENST00000293889 LAGE3Q14657 143 aa12.5□□□□□ -0.41
CCDC78-201ENST00000293889 VAMP3Q15836 100 aa12.5□□□□□ -0.41
CCDC78-201ENST00000293889 DNAH7Q8WXX0 4024 aa12.49□□□□□ -0.41
CCDC78-201ENST00000293889 M0QY20 66 aa12.49□□□□□ -0.41
CCDC78-201ENST00000293889 SLC25A29Q8N8R3 303 aa12.49□□□□□ -0.41
CCDC78-201ENST00000293889 CBY1Q9Y3M2 126 aa12.49□□□□□ -0.41
CCDC78-201ENST00000293889 A6NDN8 102 aa12.48□□□□□ -0.41
CCDC78-201ENST00000293889 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
CCDC78-201ENST00000293889 IGKCP01834 107 aa12.48□□□□□ -0.41
CCDC78-201ENST00000293889 P0DMU3 169 aa12.48□□□□□ -0.41
CCDC78-201ENST00000293889 FAM231AP0DMU4 169 aa12.48□□□□□ -0.41
CCDC78-201ENST00000293889 FAM231CP0DMU5 169 aa12.48□□□□□ -0.41
CCDC78-201ENST00000293889 Q9UF83 564 aa12.48□□□□□ -0.41
CCDC78-201ENST00000293889 DEFB131BA0A096LNP1 70 aa12.47□□□□□ -0.41
CCDC78-201ENST00000293889 TRAV12-1A0A0B4J245 112 aa12.47□□□□□ -0.41
CCDC78-201ENST00000293889 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
CCDC78-201ENST00000293889 DPM2O94777 84 aa12.47□□□□□ -0.41
CCDC78-201ENST00000293889 CRYBA4P53673 196 aa12.47□□□□□ -0.41
CCDC78-201ENST00000293889 PRO0255Q9UI72 69 aa12.47□□□□□ -0.41
CCDC78-201ENST00000293889 K7EQD1 137 aa12.46□□□□□ -0.41
CCDC78-201ENST00000293889 RPL39LQ96EH5 51 aaKnown RBP12.46□□□□□ -0.41
CCDC78-201ENST00000293889 SMIM2Q9BVW6 85 aa12.46□□□□□ -0.41
CCDC78-201ENST00000293889 TRAV10A0A0B4J240 114 aa12.45□□□□□ -0.42
CCDC78-201ENST00000293889 C9orf118A6NHY6 69 aa12.45□□□□□ -0.42
CCDC78-201ENST00000293889 H7C1H1 209 aa12.45□□□□□ -0.42
CCDC78-201ENST00000293889 PRSS1P07477 247 aa12.45□□□□□ -0.42
CCDC78-201ENST00000293889 RPL32P62910 135 aaKnown RBP12.45□□□□□ -0.42
CCDC78-201ENST00000293889 TRAV26-1A0A087WT03 109 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 A0A087WX48 190 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 A0A0J9YY99 117 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 PPP1R17O96001 155 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 RHOHQ15669 191 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 ORMDL2Q53FV1 153 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 PCP2Q8IVA1 136 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 MUC7Q8TAX7 377 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 VSIG2Q96IQ7 327 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 CSMD3Q7Z407 3707 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 TRAV8-6A0A0B4J262 113 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 LOC100131303A0A0U1RQF7 123 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 PAX4O43316 350 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 AMMECR1LQ6DCA0 310 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 PRADC1Q9BSG0 188 aa12.44□□□□□ -0.42
CCDC78-201ENST00000293889 TRBV10-1A0A0K0K1A3 114 aa12.43□□□□□ -0.42
CCDC78-201ENST00000293889 NEXN-AS1Q8NBZ9 246 aa12.43□□□□□ -0.42
CCDC78-201ENST00000293889 PHLDA1Q8WV24 401 aaPredicted RBP12.43□□□□□ -0.42
CCDC78-201ENST00000293889 NMUP48645 174 aa12.42□□□□□ -0.42
CCDC78-201ENST00000293889 TOMM6Q96B49 74 aa12.42□□□□□ -0.42
CCDC78-201ENST00000293889 IGKV2D-26A0A0A0MRZ7 120 aa12.41□□□□□ -0.42
CCDC78-201ENST00000293889 GYPEP15421 78 aa12.41□□□□□ -0.42
CCDC78-201ENST00000293889 SUMO2P61956 95 aaKnown RBP12.41□□□□□ -0.42
CCDC78-201ENST00000293889 RBX1P62877 108 aa12.41□□□□□ -0.42
CCDC78-201ENST00000293889 GAGE12JA6NER3 117 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 PLNP26678 52 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms