RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 KIF26AQ9ULI4 1882 aaPredicted RBP12.21□□□□□ -0.45
SSRP1-202ENST00000293880 DENND4CQ5VZ89 1909 aa12.21□□□□□ -0.45
SSRP1-202ENST00000293880 C19orf71A6NCJ1 209 aa12.21□□□□□ -0.46
SSRP1-202ENST00000293880 FAM30AQ9NZY2 134 aa12.21□□□□□ -0.46
SSRP1-202ENST00000293880 DSCAML1Q8TD84 2053 aa12.21□□□□□ -0.46
SSRP1-202ENST00000293880 ZFAND2AQ8N6M9 145 aa12.2□□□□□ -0.46
SSRP1-202ENST00000293880 Q6ZTI0 123 aa12.2□□□□□ -0.46
SSRP1-202ENST00000293880 PCNX2A6NKB5 2137 aa12.2□□□□□ -0.46
SSRP1-202ENST00000293880 C20orf203Q8NBC4 194 aa12.2□□□□□ -0.46
SSRP1-202ENST00000293880 ZGRF1Q86YA3 2104 aa12.19□□□□□ -0.46
SSRP1-202ENST00000293880 FAM19A1Q7Z5A9 133 aa12.19□□□□□ -0.46
SSRP1-202ENST00000293880 H3BQ85 93 aa12.19□□□□□ -0.46
SSRP1-202ENST00000293880 PROK1P58294 105 aa12.19□□□□□ -0.46
SSRP1-202ENST00000293880 FAM19A5Q7Z5A7 132 aaPredicted RBP12.19□□□□□ -0.46
SSRP1-202ENST00000293880 PLXNB3Q9ULL4 1909 aa12.19□□□□□ -0.46
SSRP1-202ENST00000293880 IGKV1D-37A0A075B6S9 117 aa12.19□□□□□ -0.46
SSRP1-202ENST00000293880 A8MZ25 164 aa12.19□□□□□ -0.46
SSRP1-202ENST00000293880 CCDC140Q96MF4 163 aa12.19□□□□□ -0.46
SSRP1-202ENST00000293880 DENND4AQ7Z401 1863 aa12.18□□□□□ -0.46
SSRP1-202ENST00000293880 WFDC13Q8IUB5 93 aa12.18□□□□□ -0.46
SSRP1-202ENST00000293880 ARHGAP21Q5T5U3 1957 aa12.18□□□□□ -0.46
SSRP1-202ENST00000293880 REG3AQ06141 175 aa12.18□□□□□ -0.46
SSRP1-202ENST00000293880 MAPKAPK5-AS1Q8N8E1 139 aa12.18□□□□□ -0.46
SSRP1-202ENST00000293880 ANAPC1Q9H1A4 1944 aa12.18□□□□□ -0.46
SSRP1-202ENST00000293880 ZNF106Q9H2Y7 1883 aaKnown RBP12.17□□□□□ -0.46
SSRP1-202ENST00000293880 FAM208BQ5VWN6 2430 aa12.17□□□□□ -0.46
SSRP1-202ENST00000293880 A0A0J9YX75 114 aa12.16□□□□□ -0.46
SSRP1-202ENST00000293880 MED14OSP0DP75 135 aa12.16□□□□□ -0.46
SSRP1-202ENST00000293880 Q6Q795 121 aa12.16□□□□□ -0.46
SSRP1-202ENST00000293880 PTPRQQ9UMZ3 2332 aa12.16□□□□□ -0.46
SSRP1-202ENST00000293880 IGLV2-8P01709 118 aa12.16□□□□□ -0.46
SSRP1-202ENST00000293880 GTF3C1Q12789 2109 aa12.16□□□□□ -0.46
SSRP1-202ENST00000293880 INSL3P51460 131 aa12.16□□□□□ -0.46
SSRP1-202ENST00000293880 TRIAP1O43715 76 aa12.15□□□□□ -0.46
SSRP1-202ENST00000293880 C1orf158Q8N1D5 194 aa12.15□□□□□ -0.46
SSRP1-202ENST00000293880 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.46
SSRP1-202ENST00000293880 MSMPQ1L6U9 139 aa12.15□□□□□ -0.46
SSRP1-202ENST00000293880 TMEM223A0PJW6 202 aa12.15□□□□□ -0.46
SSRP1-202ENST00000293880 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.15□□□□□ -0.462e-6■■■■□ 22.2
SSRP1-202ENST00000293880 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
SSRP1-202ENST00000293880 C22orf34Q6ZV56 151 aa12.14□□□□□ -0.47
SSRP1-202ENST00000293880 SMIM9A6NGZ8 99 aa12.14□□□□□ -0.47
SSRP1-202ENST00000293880 DNAJC9-AS1A6NH13 148 aa12.14□□□□□ -0.47
SSRP1-202ENST00000293880 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
SSRP1-202ENST00000293880 GPHB5Q86YW7 130 aa12.14□□□□□ -0.47
SSRP1-202ENST00000293880 SERP2Q8N6R1 65 aa12.14□□□□□ -0.47
SSRP1-202ENST00000293880 XGP55808 180 aa12.13□□□□□ -0.47
SSRP1-202ENST00000293880 C11orf1Q9H5F2 150 aa12.13□□□□□ -0.47
SSRP1-202ENST00000293880 A0A1B0GXF2 115 aa12.13□□□□□ -0.47
SSRP1-202ENST00000293880 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.12□□□□□ -0.47
SSRP1-202ENST00000293880 K7EMT4 169 aa12.12□□□□□ -0.47
SSRP1-202ENST00000293880 PSPHP1O15172 72 aa12.12□□□□□ -0.47
SSRP1-202ENST00000293880 TRBV10-1A0A0K0K1A3 114 aa12.12□□□□□ -0.47
SSRP1-202ENST00000293880 TECTAO75443 2155 aa12.12□□□□□ -0.47
SSRP1-202ENST00000293880 A0A087WZ39 114 aa12.12□□□□□ -0.47
SSRP1-202ENST00000293880 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
SSRP1-202ENST00000293880 PPDPFQ9H3Y8 114 aa12.12□□□□□ -0.47
SSRP1-202ENST00000293880 XAGE1AQ9HD64 81 aa12.12□□□□□ -0.47
SSRP1-202ENST00000293880 CRYGDP07320 174 aa12.11□□□□□ -0.47
SSRP1-202ENST00000293880 CDKN2A-AS1Q9UH64 79 aa12.11□□□□□ -0.47
SSRP1-202ENST00000293880 C11orf45Q8TAV5 145 aa12.11□□□□□ -0.47
SSRP1-202ENST00000293880 PRO0255Q9UI72 69 aa12.11□□□□□ -0.47
SSRP1-202ENST00000293880 IGKV2-28A0A075B6P5 120 aa12.1□□□□□ -0.47
SSRP1-202ENST00000293880 IGKV2D-28P01615 120 aa12.1□□□□□ -0.47
SSRP1-202ENST00000293880 NUP210Q8TEM1 1887 aaPredicted RBP12.1□□□□□ -0.47
SSRP1-202ENST00000293880 SMAD5-AS1Q9Y6J3 95 aa12.1□□□□□ -0.47
SSRP1-202ENST00000293880 A6NDX4 124 aa12.1□□□□□ -0.47
SSRP1-202ENST00000293880 IGLV1-47P01700 117 aa12.1□□□□□ -0.47
SSRP1-202ENST00000293880 CREBBPQ92793 2442 aa12.09□□□□□ -0.47
SSRP1-202ENST00000293880 A0A1W2PNU3 283 aaPredicted RBP12.09□□□□□ -0.47
SSRP1-202ENST00000293880 COX7CP15954 63 aa12.09□□□□□ -0.47
SSRP1-202ENST00000293880 MYCNOSP40205 109 aa12.09□□□□□ -0.47
SSRP1-202ENST00000293880 LINC00482Q8N8I6 264 aa12.09□□□□□ -0.47
SSRP1-202ENST00000293880 KLK5Q9Y337 293 aaPredicted RBP12.09□□□□□ -0.47
SSRP1-202ENST00000293880 FAM222AQ5U5X8 452 aa12.09□□□□□ -0.47
SSRP1-202ENST00000293880 SPINK6Q6UWN8 80 aa12.09□□□□□ -0.47
SSRP1-202ENST00000293880 CELA1Q9UNI1 258 aa12.09□□□□□ -0.47
SSRP1-202ENST00000293880 NOTCH3Q9UM47 2321 aa12.08□□□□□ -0.47
SSRP1-202ENST00000293880 ADAMTS9Q9P2N4 1935 aa12.08□□□□□ -0.48
SSRP1-202ENST00000293880 CCKP06307 115 aa12.08□□□□□ -0.48
SSRP1-202ENST00000293880 LRRC75A-AS1Q8N1F1 130 aa12.08□□□□□ -0.48
SSRP1-202ENST00000293880 MED13LQ71F56 2210 aa12.08□□□□□ -0.48
SSRP1-202ENST00000293880 IGLV4-3A0A075B6K6 122 aa12.08□□□□□ -0.48
SSRP1-202ENST00000293880 PDE6GP18545 87 aa12.08□□□□□ -0.48
SSRP1-202ENST00000293880 Q6ZSR3 168 aa12.08□□□□□ -0.48
SSRP1-202ENST00000293880 LOC107984640A0A0U1RRK4 108 aa12.08□□□□□ -0.48
SSRP1-202ENST00000293880 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
SSRP1-202ENST00000293880 SERP1Q9Y6X1 66 aa12.08□□□□□ -0.48
SSRP1-202ENST00000293880 PLCE1Q9P212 2302 aa12.07□□□□□ -0.48
SSRP1-202ENST00000293880 IGFL2Q6UWQ7 119 aa12.07□□□□□ -0.48
SSRP1-202ENST00000293880 LINC00308Q8TCZ7 52 aa12.07□□□□□ -0.48
SSRP1-202ENST00000293880 PRM2P04554 102 aa12.07□□□□□ -0.48
SSRP1-202ENST00000293880 Q6ZPA2 131 aa12.07□□□□□ -0.48
SSRP1-202ENST00000293880 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
SSRP1-202ENST00000293880 C10orf99Q6UWK7 81 aa12.07□□□□□ -0.48
SSRP1-202ENST00000293880 CRIP1P50238 77 aa12.06□□□□□ -0.48
SSRP1-202ENST00000293880 COL4A3Q01955 1670 aa12.06□□□□□ -0.48
SSRP1-202ENST00000293880 UFSP1Q6NVU6 142 aa12.06□□□□□ -0.48
SSRP1-202ENST00000293880 CFAP126Q5VTH2 177 aa12.05□□□□□ -0.48
SSRP1-202ENST00000293880 KIAA1549LQ6ZVL6 1849 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms