RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 DEFB114Q30KQ6 69 aa10.99□□□□□ -0.65
CCDC116-201ENST00000292779 UBE2D1P51668 147 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 ZNF415Q09FC8 603 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 AMELXQ99217 191 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 ESM1Q9NQ30 184 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 PGPEP1Q9NXJ5 209 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 TMEM223A0PJW6 202 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 A8MWV9 139 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 RPL24P83731 157 aaKnown RBP10.98□□□□□ -0.65
CCDC116-201ENST00000292779 Q6ZSN1 163 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 VCX2Q9H322 139 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 Q9UF83 564 aa10.98□□□□□ -0.65
CCDC116-201ENST00000292779 DNAJC9-AS1A6NH13 148 aa10.97□□□□□ -0.65
CCDC116-201ENST00000292779 LGALS3P17931 250 aaKnown RBP10.97□□□□□ -0.65
CCDC116-201ENST00000292779 TMEM86BQ8N661 226 aa10.97□□□□□ -0.65
CCDC116-201ENST00000292779 C11orf44Q8N8P7 122 aa10.97□□□□□ -0.65
CCDC116-201ENST00000292779 LINC01587Q99440 93 aa10.97□□□□□ -0.65
CCDC116-201ENST00000292779 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
CCDC116-201ENST00000292779 A0A0J9YXV3 536 aa10.97□□□□□ -0.65
CCDC116-201ENST00000292779 CD28P10747 220 aa10.97□□□□□ -0.65
CCDC116-201ENST00000292779 ZNF22P17026 224 aaPredicted RBP10.97□□□□□ -0.65
CCDC116-201ENST00000292779 WFDC2Q14508 124 aa10.97□□□□□ -0.65
CCDC116-201ENST00000292779 SLC25A29Q8N8R3 303 aa10.97□□□□□ -0.65
CCDC116-201ENST00000292779 TNFRSF18Q9Y5U5 241 aa10.97□□□□□ -0.65
CCDC116-201ENST00000292779 WNK1Q9H4A3 2382 aa10.96□□□□□ -0.65
CCDC116-201ENST00000292779 TEX48A0A1B0GUV7 120 aa10.96□□□□□ -0.65
CCDC116-201ENST00000292779 F8W1H4 67 aa10.96□□□□□ -0.65
CCDC116-201ENST00000292779 RAX2Q96IS3 184 aa10.96□□□□□ -0.65
CCDC116-201ENST00000292779 SPANXB1Q9NS25 103 aaPredicted RBP10.96□□□□□ -0.65
CCDC116-201ENST00000292779 IGHV3-64A0A075B6Q5 118 aa10.96□□□□□ -0.66
CCDC116-201ENST00000292779 RHODO00212 210 aa10.96□□□□□ -0.66
CCDC116-201ENST00000292779 LEPROTO15243 131 aa10.96□□□□□ -0.66
CCDC116-201ENST00000292779 CFAP126Q5VTH2 177 aa10.96□□□□□ -0.66
CCDC116-201ENST00000292779 C11orf72Q8NBR9 251 aa10.96□□□□□ -0.66
CCDC116-201ENST00000292779 FAM104AQ969W3 186 aa10.96□□□□□ -0.66
CCDC116-201ENST00000292779 APOMO95445 188 aa10.95□□□□□ -0.66
CCDC116-201ENST00000292779 IGHV3-30P01768 117 aa10.95□□□□□ -0.66
CCDC116-201ENST00000292779 IGHV3-30-5P0DP03 117 aa10.95□□□□□ -0.66
CCDC116-201ENST00000292779 PIK3CD-AS1Q5SR53 167 aa10.95□□□□□ -0.66
CCDC116-201ENST00000292779 CEMP1Q6PRD7 247 aaPredicted RBP10.95□□□□□ -0.66
CCDC116-201ENST00000292779 PYGO1Q9Y3Y4 419 aa10.95□□□□□ -0.66
CCDC116-201ENST00000292779 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
CCDC116-201ENST00000292779 TSPAN13O95857 204 aa10.94□□□□□ -0.66
CCDC116-201ENST00000292779 INSP01308 110 aa10.94□□□□□ -0.66
CCDC116-201ENST00000292779 MTURNQ8N3F0 131 aa10.94□□□□□ -0.66
CCDC116-201ENST00000292779 PTH2Q96A98 100 aa10.94□□□□□ -0.66
CCDC116-201ENST00000292779 NDUFA11Q86Y39 141 aa10.93□□□□□ -0.66
CCDC116-201ENST00000292779 TEX29Q8N6K0 151 aa10.93□□□□□ -0.66
CCDC116-201ENST00000292779 LINC00467Q9BRT7 94 aa10.93□□□□□ -0.66
CCDC116-201ENST00000292779 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
CCDC116-201ENST00000292779 SFTA2Q6UW10 78 aa10.93□□□□□ -0.66
CCDC116-201ENST00000292779 ODF3L2Q3SX64 289 aa10.92□□□□□ -0.66
CCDC116-201ENST00000292779 RNASE13Q5GAN3 156 aaKnown RBP10.92□□□□□ -0.66
CCDC116-201ENST00000292779 XCL2Q9UBD3 114 aa10.92□□□□□ -0.66
CCDC116-201ENST00000292779 PRO0461Q9UI25 63 aa10.92□□□□□ -0.66
CCDC116-201ENST00000292779 CHCHD7Q9BUK0 85 aa10.92□□□□□ -0.66
CCDC116-201ENST00000292779 CFC1BP0CG36 223 aa10.91□□□□□ -0.66
CCDC116-201ENST00000292779 CFC1P0CG37 223 aa10.91□□□□□ -0.66
CCDC116-201ENST00000292779 BEAN1Q3B7T3 259 aa10.91□□□□□ -0.66
CCDC116-201ENST00000292779 SPXQ9BT56 116 aa10.91□□□□□ -0.66
CCDC116-201ENST00000292779 LOC107984156A0A0G2JMH3 177 aa10.91□□□□□ -0.66
CCDC116-201ENST00000292779 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
CCDC116-201ENST00000292779 AZU1P20160 251 aa10.91□□□□□ -0.66
CCDC116-201ENST00000292779 SH2D6Q7Z4S9 175 aa10.91□□□□□ -0.66
CCDC116-201ENST00000292779 ARL17AQ8IVW1 177 aa10.91□□□□□ -0.66
CCDC116-201ENST00000292779 MAST4O15021 2626 aa10.9□□□□□ -0.66
CCDC116-201ENST00000292779 INAFM1C9JVW0 142 aa10.9□□□□□ -0.66
CCDC116-201ENST00000292779 MRPS36P82909 103 aaKnown RBP10.9□□□□□ -0.66
CCDC116-201ENST00000292779 ETDBQ3ZM63 59 aa10.9□□□□□ -0.66
CCDC116-201ENST00000292779 JMJD1CQ15652 2540 aa10.9□□□□□ -0.67
CCDC116-201ENST00000292779 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.89□□□□□ -0.67
CCDC116-201ENST00000292779 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 IGKV2-29A2NJV5 120 aaPredicted RBP10.89□□□□□ -0.67
CCDC116-201ENST00000292779 CCL24O00175 119 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 CRYBA4P53673 196 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 FHL3Q13643 280 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 UBE2D4Q9Y2X8 147 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 TENM1Q9UKZ4 2725 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 RS1O15537 224 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 UBE2D3P61077 147 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 UBE2D2P62837 147 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 STHQ8IWL8 128 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 CLUHP3Q96NS8 147 aa10.89□□□□□ -0.67
CCDC116-201ENST00000292779 IGHV3OR16-12A0A075B7B8 117 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 TRAV25A0A0B4J276 109 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 IGHV3-30-3P0DP02 117 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 C10orf126Q8N4M7 172 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 C2CD3Q4AC94 2353 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 PSMB2P49721 201 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 C1orf158Q8N1D5 194 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 DNAJC30Q96LL9 226 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
CCDC116-201ENST00000292779 TIMM21Q9BVV7 248 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 SPANXA1Q9NS26 97 aa10.88□□□□□ -0.67
CCDC116-201ENST00000292779 TRAV8-3A0A0A6YYJ7 113 aa10.87□□□□□ -0.67
CCDC116-201ENST00000292779 A4D1N5 150 aa10.87□□□□□ -0.67
CCDC116-201ENST00000292779 PRO1854Q9UHT4 67 aa10.87□□□□□ -0.67
CCDC116-201ENST00000292779 A0A0J9YXY3 114 aa10.86□□□□□ -0.67
CCDC116-201ENST00000292779 ADARB2-AS1A8MUL3 147 aa10.86□□□□□ -0.67
CCDC116-201ENST00000292779 COTL1Q14019 142 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms