RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PRO1854Q9UHT4 67 aa13.51□□□□□ -0.25
PDLIM3-201ENST00000284767 A8MWV9 139 aa13.5□□□□□ -0.25
PDLIM3-201ENST00000284767 K7EQG2 157 aa13.5□□□□□ -0.25
PDLIM3-201ENST00000284767 SPINK8P0C7L1 97 aa13.5□□□□□ -0.25
PDLIM3-201ENST00000284767 CARD19Q96LW7 228 aa13.5□□□□□ -0.25
PDLIM3-201ENST00000284767 J3QQQ9 107 aa13.5□□□□□ -0.25
PDLIM3-201ENST00000284767 F5H697 171 aa13.49□□□□□ -0.25
PDLIM3-201ENST00000284767 LGALS3P17931 250 aaKnown RBP13.49□□□□□ -0.25
PDLIM3-201ENST00000284767 TEX29Q8N6K0 151 aa13.49□□□□□ -0.25
PDLIM3-201ENST00000284767 C4orf3Q8WVX3 66 aa13.49□□□□□ -0.25
PDLIM3-201ENST00000284767 PTH2Q96A98 100 aa13.49□□□□□ -0.25
PDLIM3-201ENST00000284767 JPT2Q9H910 190 aa13.49□□□□□ -0.25
PDLIM3-201ENST00000284767 FHL3Q13643 280 aa13.49□□□□□ -0.25
PDLIM3-201ENST00000284767 Q6ZUT4 128 aa13.49□□□□□ -0.25
PDLIM3-201ENST00000284767 SETXQ7Z333 2677 aaKnown RBP13.48□□□□□ -0.25
PDLIM3-201ENST00000284767 A0A087WWL8 130 aa13.48□□□□□ -0.25
PDLIM3-201ENST00000284767 TRAV12-2A0A075B6T6 113 aa13.48□□□□□ -0.25
PDLIM3-201ENST00000284767 CD28P10747 220 aa13.47□□□□□ -0.25
PDLIM3-201ENST00000284767 SNRPD3P62318 126 aaKnown RBP13.47□□□□□ -0.25
PDLIM3-201ENST00000284767 RHOHQ15669 191 aa13.47□□□□□ -0.25
PDLIM3-201ENST00000284767 NSUN5P1Q3KNT7 163 aa13.47□□□□□ -0.25
PDLIM3-201ENST00000284767 M0QXV9 152 aa13.46□□□□□ -0.25
PDLIM3-201ENST00000284767 MT-ATP8P03928 68 aa13.46□□□□□ -0.25
PDLIM3-201ENST00000284767 SCGB1C2P0DMR2 95 aa13.46□□□□□ -0.25
PDLIM3-201ENST00000284767 GEMIN7Q9H840 131 aaKnown RBP13.46□□□□□ -0.25
PDLIM3-201ENST00000284767 TRAV12-3A0A0B4J271 114 aa13.46□□□□□ -0.26
PDLIM3-201ENST00000284767 A0A0J9YX75 114 aa13.46□□□□□ -0.26
PDLIM3-201ENST00000284767 LEPROTO15243 131 aa13.46□□□□□ -0.26
PDLIM3-201ENST00000284767 XGP55808 180 aa13.46□□□□□ -0.26
PDLIM3-201ENST00000284767 C9orf85Q96MD7 179 aa13.45□□□□□ -0.26
PDLIM3-201ENST00000284767 TMEM61Q8N0U2 210 aa13.45□□□□□ -0.26
PDLIM3-201ENST00000284767 DEFB104AQ8WTQ1 72 aa13.45□□□□□ -0.26
PDLIM3-201ENST00000284767 TMEM223A0PJW6 202 aa13.44□□□□□ -0.26
PDLIM3-201ENST00000284767 ANKRD29Q8N6D5 301 aa13.44□□□□□ -0.26
PDLIM3-201ENST00000284767 LINC01006Q8NI28 216 aa13.44□□□□□ -0.26
PDLIM3-201ENST00000284767 RAX2Q96IS3 184 aa13.44□□□□□ -0.26
PDLIM3-201ENST00000284767 SPINK13Q1W4C9 94 aa13.44□□□□□ -0.26
PDLIM3-201ENST00000284767 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
PDLIM3-201ENST00000284767 TMEM262E9PQX1 116 aa13.43□□□□□ -0.26
PDLIM3-201ENST00000284767 CITED2Q99967 270 aaPredicted RBP13.43□□□□□ -0.26
PDLIM3-201ENST00000284767 ZNF256Q9Y2P7 627 aaPredicted RBP13.43□□□□□ -0.26
PDLIM3-201ENST00000284767 A0A0B4J2C4 111 aa13.43□□□□□ -0.26
PDLIM3-201ENST00000284767 IGHV3-16A0A0C4DH30 117 aa13.43□□□□□ -0.26
PDLIM3-201ENST00000284767 KNCNA6PVL3 124 aa13.43□□□□□ -0.26
PDLIM3-201ENST00000284767 M0QY20 66 aa13.43□□□□□ -0.26
PDLIM3-201ENST00000284767 A4D1N5 150 aa13.42□□□□□ -0.26
PDLIM3-201ENST00000284767 FAM74A4Q5TZK3 123 aa13.42□□□□□ -0.26
PDLIM3-201ENST00000284767 TRPT1Q86TN4 253 aaKnown RBP13.42□□□□□ -0.26
PDLIM3-201ENST00000284767 IGHV3-33P01772 117 aa13.42□□□□□ -0.26
PDLIM3-201ENST00000284767 TMEM263Q8WUH6 116 aaKnown RBP13.42□□□□□ -0.26
PDLIM3-201ENST00000284767 RNASE1P07998 156 aaKnown RBP13.41□□□□□ -0.26
PDLIM3-201ENST00000284767 P0DMU3 169 aa13.41□□□□□ -0.26
PDLIM3-201ENST00000284767 FAM231AP0DMU4 169 aa13.41□□□□□ -0.26
PDLIM3-201ENST00000284767 FAM231CP0DMU5 169 aa13.41□□□□□ -0.26
PDLIM3-201ENST00000284767 DEFB131AP59861 70 aa13.41□□□□□ -0.26
PDLIM3-201ENST00000284767 ZNF56Q15929 161 aa13.41□□□□□ -0.26
PDLIM3-201ENST00000284767 MDFICQ9P1T7 246 aa13.41□□□□□ -0.26
PDLIM3-201ENST00000284767 SLC25A20O43772 301 aa13.41□□□□□ -0.26
PDLIM3-201ENST00000284767 PEMTQ9UBM1 199 aa13.41□□□□□ -0.26
PDLIM3-201ENST00000284767 LY6G6DO95868 133 aa13.4□□□□□ -0.26
PDLIM3-201ENST00000284767 ERG28Q9UKR5 140 aa13.4□□□□□ -0.26
PDLIM3-201ENST00000284767 TRAV26-1A0A087WT03 109 aa13.4□□□□□ -0.26
PDLIM3-201ENST00000284767 RHODO00212 210 aa13.4□□□□□ -0.26
PDLIM3-201ENST00000284767 C20orf203Q8NBC4 194 aa13.4□□□□□ -0.26
PDLIM3-201ENST00000284767 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.39□□□□□ -0.27
PDLIM3-201ENST00000284767 ZNF22P17026 224 aaPredicted RBP13.39□□□□□ -0.27
PDLIM3-201ENST00000284767 DYNLRB2Q8TF09 96 aa13.39□□□□□ -0.27
PDLIM3-201ENST00000284767 EIF4EBP3O60516 100 aaPredicted RBP13.38□□□□□ -0.27
PDLIM3-201ENST00000284767 OPRPNQ99935 248 aaPredicted RBP13.38□□□□□ -0.27
PDLIM3-201ENST00000284767 TRAV2A0A0B4J234 112 aa13.38□□□□□ -0.27
PDLIM3-201ENST00000284767 C9JAW5 83 aa13.38□□□□□ -0.27
PDLIM3-201ENST00000284767 I3L3M4 83 aa13.38□□□□□ -0.27
PDLIM3-201ENST00000284767 HILS1P60008 231 aa13.38□□□□□ -0.27
PDLIM3-201ENST00000284767 CCL24O00175 119 aa13.37□□□□□ -0.27
PDLIM3-201ENST00000284767 DEFB114Q30KQ6 69 aa13.37□□□□□ -0.27
PDLIM3-201ENST00000284767 MUSTN1Q8IVN3 82 aa13.37□□□□□ -0.27
PDLIM3-201ENST00000284767 JMJD1CQ15652 2540 aa13.37□□□□□ -0.27
PDLIM3-201ENST00000284767 CLUHP3Q96NS8 147 aa13.37□□□□□ -0.27
PDLIM3-201ENST00000284767 HIVEP1P15822 2718 aa13.37□□□□□ -0.27
PDLIM3-201ENST00000284767 M0R2P5 195 aa13.36□□□□□ -0.27
PDLIM3-201ENST00000284767 Q8N1Y9 231 aa13.36□□□□□ -0.27
PDLIM3-201ENST00000284767 FN1P02751 2386 aaKnown RBP13.36□□□□□ -0.27
PDLIM3-201ENST00000284767 NSD1Q96L73 2696 aaPredicted RBP13.36□□□□□ -0.27
PDLIM3-201ENST00000284767 LINC01600Q96MT4 127 aa13.36□□□□□ -0.27
PDLIM3-201ENST00000284767 IGLV4-3A0A075B6K6 122 aa13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 IGHV1OR15-1A0A075B7D0 117 aa13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 RBMY1BA6NDE4 496 aaKnown RBP13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 RBMY1EA6NEQ0 496 aaKnown RBP13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 PRM2P04554 102 aa13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 RBMY1DP0C7P1 496 aaKnown RBP13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 RBMY1A1P0DJD3 496 aaKnown RBP13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 RBMY1CP0DJD4 496 aa13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 RBMY1FQ15415 496 aaKnown RBP13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 ATXN8Q156A1 80 aa13.35□□□□□ -0.27
PDLIM3-201ENST00000284767 A0A0J9YXV3 536 aa13.34□□□□□ -0.27
PDLIM3-201ENST00000284767 HTN1P15515 57 aa13.34□□□□□ -0.27
PDLIM3-201ENST00000284767 C16orf95Q9H693 158 aa13.34□□□□□ -0.27
PDLIM3-201ENST00000284767 MAP6D1Q9H9H5 199 aa13.34□□□□□ -0.27
PDLIM3-201ENST00000284767 A0A0J9YXY3 114 aa13.33□□□□□ -0.27
PDLIM3-201ENST00000284767 ZFAND6Q6FIF0 208 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms