RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TRBV25-1A0A075B6N4 114 aa12.92□□□□□ -0.34
CAPN1-201ENST00000279247 IGHV3-64A0A075B6Q5 118 aa12.92□□□□□ -0.34
CAPN1-201ENST00000279247 C20orf203Q8NBC4 194 aa12.92□□□□□ -0.34
CAPN1-201ENST00000279247 ZNRF2Q8NHG8 242 aa12.92□□□□□ -0.34
CAPN1-201ENST00000279247 CST9LQ9H4G1 147 aa12.92□□□□□ -0.34
CAPN1-201ENST00000279247 PKD1L1Q8TDX9 2849 aa12.92□□□□□ -0.34
CAPN1-201ENST00000279247 TRGV2A0A075B6R0 118 aa12.92□□□□□ -0.34
CAPN1-201ENST00000279247 OR11H2Q8NH07 326 aa12.92□□□□□ -0.34
CAPN1-201ENST00000279247 RAB37Q96AX2 223 aa12.92□□□□□ -0.34
CAPN1-201ENST00000279247 TMEM263Q8WUH6 116 aaKnown RBP12.91□□□□□ -0.34
CAPN1-201ENST00000279247 PRADC1Q9BSG0 188 aa12.91□□□□□ -0.34
CAPN1-201ENST00000279247 RRN3P1Q2M238 152 aa12.9□□□□□ -0.34
CAPN1-201ENST00000279247 CHAC1Q9BUX1 264 aa12.9□□□□□ -0.34
CAPN1-201ENST00000279247 IGLV4-69A0A075B6H9 119 aa12.9□□□□□ -0.34
CAPN1-201ENST00000279247 RHODO00212 210 aa12.89□□□□□ -0.35
CAPN1-201ENST00000279247 RHOHQ15669 191 aa12.89□□□□□ -0.35
CAPN1-201ENST00000279247 RS1O15537 224 aa12.89□□□□□ -0.35
CAPN1-201ENST00000279247 CLUHP3Q96NS8 147 aa12.89□□□□□ -0.35
CAPN1-201ENST00000279247 TIMM17AQ99595 171 aa12.89□□□□□ -0.35
CAPN1-201ENST00000279247 COX11Q9Y6N1 276 aa12.89□□□□□ -0.35
CAPN1-201ENST00000279247 DLEU1O43261 78 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 VAMP3Q15836 100 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 VCX2Q9H322 139 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 TAX1BP3O14907 124 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 CMC4P56277 68 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-201ENST00000279247 TMEM141Q96I45 108 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 GAGE12JA6NER3 117 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 GAGE1Q13065 139 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 GAGE4Q13068 117 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 GAGE5Q13069 117 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 GAGE13Q4V321 117 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 ORAOV1Q8WV07 137 aa12.88□□□□□ -0.35
CAPN1-201ENST00000279247 A0A0J9YXV3 536 aa12.87□□□□□ -0.35
CAPN1-201ENST00000279247 HSD52Q0P140 79 aa12.87□□□□□ -0.35
CAPN1-201ENST00000279247 DEFB130BP0DP73 79 aa12.87□□□□□ -0.35
CAPN1-201ENST00000279247 DEFB130AP0DP74 79 aa12.87□□□□□ -0.35
CAPN1-201ENST00000279247 PTTG1IPP53801 180 aa12.87□□□□□ -0.35
CAPN1-201ENST00000279247 LINC00467Q9BRT7 94 aa12.87□□□□□ -0.35
CAPN1-201ENST00000279247 COTL1Q14019 142 aa12.86□□□□□ -0.35
CAPN1-201ENST00000279247 IGLV4-3A0A075B6K6 122 aa12.86□□□□□ -0.35
CAPN1-201ENST00000279247 FXYD2P54710 66 aa12.86□□□□□ -0.35
CAPN1-201ENST00000279247 ZNF815PA8K554 130 aa12.86□□□□□ -0.35
CAPN1-201ENST00000279247 C1QTNF4Q9BXJ3 329 aa12.86□□□□□ -0.35
CAPN1-201ENST00000279247 LOC100131303A0A0U1RQF7 123 aa12.85□□□□□ -0.35
CAPN1-201ENST00000279247 SCGB1D4Q6XE38 83 aa12.85□□□□□ -0.35
CAPN1-201ENST00000279247 SLC25A29Q8N8R3 303 aa12.85□□□□□ -0.35
CAPN1-201ENST00000279247 DEFB4AO15263 64 aa12.85□□□□□ -0.35
CAPN1-201ENST00000279247 K7ERJ3 54 aa12.84□□□□□ -0.35
CAPN1-201ENST00000279247 CSNK1G2-AS1Q8NCQ2 148 aa12.84□□□□□ -0.35
CAPN1-201ENST00000279247 HIST1H4GQ99525 98 aa12.84□□□□□ -0.35
CAPN1-201ENST00000279247 PLAC8L1A1L4L8 177 aa12.83□□□□□ -0.35
CAPN1-201ENST00000279247 C16orf74Q96GX8 76 aa12.83□□□□□ -0.35
CAPN1-201ENST00000279247 SIVA1O15304 175 aa12.83□□□□□ -0.36
CAPN1-201ENST00000279247 CHCHD7Q9BUK0 85 aa12.83□□□□□ -0.36
CAPN1-201ENST00000279247 MYMXA0A1B0GTQ4 84 aa12.83□□□□□ -0.36
CAPN1-201ENST00000279247 KRTAP24-1Q3LI83 254 aa12.83□□□□□ -0.36
CAPN1-201ENST00000279247 PIK3CD-AS1Q5SR53 167 aa12.83□□□□□ -0.36
CAPN1-201ENST00000279247 IL17DQ8TAD2 202 aa12.83□□□□□ -0.36
CAPN1-201ENST00000279247 PLEKHB2Q96CS7 222 aa12.83□□□□□ -0.36
CAPN1-201ENST00000279247 TRGV4A0A0C4DH28 118 aa12.82□□□□□ -0.36
CAPN1-201ENST00000279247 E9PLD3 99 aa12.82□□□□□ -0.36
CAPN1-201ENST00000279247 TRBV7-3A0A075B6L6 115 aa12.82□□□□□ -0.36
CAPN1-201ENST00000279247 K7EQD1 137 aa12.82□□□□□ -0.36
CAPN1-201ENST00000279247 DGAT2L7PQ6IED9 249 aa12.82□□□□□ -0.36
CAPN1-201ENST00000279247 NHP2Q9NX24 153 aaKnown RBP12.82□□□□□ -0.36
CAPN1-201ENST00000279247 RPL36AP83881 106 aaKnown RBP12.81□□□□□ -0.36
CAPN1-201ENST00000279247 Q6ZUT4 128 aa12.81□□□□□ -0.36
CAPN1-201ENST00000279247 RPL36ALQ969Q0 106 aaKnown RBP12.81□□□□□ -0.36
CAPN1-201ENST00000279247 A6NDN8 102 aa12.81□□□□□ -0.36
CAPN1-201ENST00000279247 TSPEAR-AS2P59090 65 aa12.81□□□□□ -0.36
CAPN1-201ENST00000279247 HERVK_113P61574 105 aa12.81□□□□□ -0.36
CAPN1-201ENST00000279247 SEC11AP67812 179 aa12.81□□□□□ -0.36
CAPN1-201ENST00000279247 AMMECR1LQ6DCA0 310 aa12.81□□□□□ -0.36
CAPN1-201ENST00000279247 FAM110AQ9BQ89 295 aa12.81□□□□□ -0.36
CAPN1-201ENST00000279247 LINC01549A6NIU2 74 aa12.8□□□□□ -0.36
CAPN1-201ENST00000279247 DEFB135Q30KP9 77 aa12.8□□□□□ -0.36
CAPN1-201ENST00000279247 C9orf66Q5T8R8 295 aa12.8□□□□□ -0.36
CAPN1-201ENST00000279247 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
CAPN1-201ENST00000279247 TRAV4A0A0B4J268 109 aa12.8□□□□□ -0.36
CAPN1-201ENST00000279247 H3BUT2 72 aa12.8□□□□□ -0.36
CAPN1-201ENST00000279247 PTH2Q96A98 100 aa12.8□□□□□ -0.36
CAPN1-201ENST00000279247 EDA2RQ9HAV5 297 aa12.79□□□□□ -0.36
CAPN1-201ENST00000279247 CCL25O15444 150 aa12.79□□□□□ -0.36
CAPN1-201ENST00000279247 LINC00694P0DN24 101 aa12.79□□□□□ -0.36
CAPN1-201ENST00000279247 FAM104AQ969W3 186 aa12.79□□□□□ -0.36
CAPN1-201ENST00000279247 DAZ2Q13117 558 aaKnown RBP12.78□□□□□ -0.36
CAPN1-201ENST00000279247 PAPPA-AS1Q5QFB9 102 aa12.78□□□□□ -0.36
CAPN1-201ENST00000279247 UBE2D4Q9Y2X8 147 aa12.78□□□□□ -0.36
CAPN1-201ENST00000279247 CITED1Q99966 193 aa12.78□□□□□ -0.36
CAPN1-201ENST00000279247 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
CAPN1-201ENST00000279247 DNAJC30Q96LL9 226 aa12.78□□□□□ -0.36
CAPN1-201ENST00000279247 NOTCH1P46531 2555 aa12.77□□□□□ -0.36
CAPN1-201ENST00000279247 ZNF22P17026 224 aaPredicted RBP12.77□□□□□ -0.36
CAPN1-201ENST00000279247 CEND1Q8N111 149 aa12.77□□□□□ -0.36
CAPN1-201ENST00000279247 HIGD1BQ9P298 99 aa12.77□□□□□ -0.36
CAPN1-201ENST00000279247 TRAV8-3A0A0A6YYJ7 113 aa12.77□□□□□ -0.37
CAPN1-201ENST00000279247 A8MZ25 164 aa12.76□□□□□ -0.37
CAPN1-201ENST00000279247 LGALS3P17931 250 aaKnown RBP12.76□□□□□ -0.37
CAPN1-201ENST00000279247 NTM-AS1Q6ZSK4 140 aa12.75□□□□□ -0.37
CAPN1-201ENST00000279247 J3QQQ9 107 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 319.7 ms