RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PLA2G2CQ5R387 149 aa11.34□□□□□ -0.59
CASC3-201ENST00000264645 BRCA2P51587 3418 aa11.34□□□□□ -0.59
CASC3-201ENST00000264645 H0YGX0 51 aa11.33□□□□□ -0.59
CASC3-201ENST00000264645 TSPEAR-AS2P59090 65 aa11.33□□□□□ -0.59
CASC3-201ENST00000264645 C5orf56Q8N8D9 126 aa11.33□□□□□ -0.59
CASC3-201ENST00000264645 ABCA2Q9BZC7 2435 aa11.33□□□□□ -0.6
CASC3-201ENST00000264645 Q6Q795 121 aa11.33□□□□□ -0.6
CASC3-201ENST00000264645 IGLV2-18A0A075B6J9 118 aa11.33□□□□□ -0.6
CASC3-201ENST00000264645 RNASE3P12724 160 aaKnown RBP11.33□□□□□ -0.6
CASC3-201ENST00000264645 SS18Q15532 418 aa11.33□□□□□ -0.6
CASC3-201ENST00000264645 TRAV23DV6A0A075B6W5 121 aa11.32□□□□□ -0.6
CASC3-201ENST00000264645 LST1O00453 97 aa11.32□□□□□ -0.6
CASC3-201ENST00000264645 TMEM61Q8N0U2 210 aa11.32□□□□□ -0.6
CASC3-201ENST00000264645 MIR7-3HGQ8N6C7 128 aa11.32□□□□□ -0.6
CASC3-201ENST00000264645 HTTP42858 3142 aa11.32□□□□□ -0.6
CASC3-201ENST00000264645 PRRC2AP48634 2157 aaKnown RBP11.32□□□□□ -0.6
CASC3-201ENST00000264645 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
CASC3-201ENST00000264645 POLR2KP53803 58 aaKnown RBP11.31□□□□□ -0.6
CASC3-201ENST00000264645 Q6ZSV7 163 aa11.31□□□□□ -0.6
CASC3-201ENST00000264645 C20orf197Q8N268 126 aa11.31□□□□□ -0.6
CASC3-201ENST00000264645 FAM110AQ9BQ89 295 aa11.31□□□□□ -0.6
CASC3-201ENST00000264645 FN1P02751 2386 aaKnown RBP11.31□□□□□ -0.6
CASC3-201ENST00000264645 B4DSR2 109 aa11.31□□□□□ -0.6
CASC3-201ENST00000264645 LY6LH3BQJ8 138 aa11.31□□□□□ -0.6
CASC3-201ENST00000264645 CLPSL2Q6UWE3 100 aa11.31□□□□□ -0.6
CASC3-201ENST00000264645 IGIPA6NJ69 53 aa11.3□□□□□ -0.6
CASC3-201ENST00000264645 IGHV4-4A0A075B6R2 117 aa11.3□□□□□ -0.6
CASC3-201ENST00000264645 M0QY20 66 aa11.3□□□□□ -0.6
CASC3-201ENST00000264645 LY6DQ14210 128 aa11.3□□□□□ -0.6
CASC3-201ENST00000264645 COL5A1P20908 1838 aaPredicted RBP11.3□□□□□ -0.6
CASC3-201ENST00000264645 CEP192Q8TEP8 1941 aa11.3□□□□□ -0.6
CASC3-201ENST00000264645 DSCR8Q96T75 97 aa11.29□□□□□ -0.6
CASC3-201ENST00000264645 RANBP2P49792 3224 aaKnown RBP11.29□□□□□ -0.6
CASC3-201ENST00000264645 PSMB8P28062 276 aa11.29□□□□□ -0.6
CASC3-201ENST00000264645 LINC00308Q8TCZ7 52 aa11.29□□□□□ -0.6
CASC3-201ENST00000264645 IMUPQ9GZP8 106 aa11.29□□□□□ -0.6
CASC3-201ENST00000264645 XCL1P47992 114 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 NSUN5P1Q3KNT7 163 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 PIK3CD-AS1Q5SR53 167 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 HIST2H2BCQ6DN03 193 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 HIST2H2BDQ6DRA6 164 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 IGLV4-69A0A075B6H9 119 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 IGHV4OR15-8A0A075B7B6 117 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 A0A087WW49 117 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 UNC80Q8N2C7 3258 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 DEFB136Q30KP8 78 aa11.28□□□□□ -0.6
CASC3-201ENST00000264645 KLK5Q9Y337 293 aaPredicted RBP11.28□□□□□ -0.6
CASC3-201ENST00000264645 MSMBP08118 114 aa11.27□□□□□ -0.6
CASC3-201ENST00000264645 MAPK1IP1LQ8NDC0 245 aa11.27□□□□□ -0.6
CASC3-201ENST00000264645 A0A0J9YX75 114 aa11.27□□□□□ -0.61
CASC3-201ENST00000264645 H3BUA1 57 aa11.27□□□□□ -0.61
CASC3-201ENST00000264645 COX7CP15954 63 aa11.27□□□□□ -0.61
CASC3-201ENST00000264645 ODF3BA8MYP8 253 aa11.27□□□□□ -0.61
CASC3-201ENST00000264645 PPDPFQ9H3Y8 114 aa11.27□□□□□ -0.61
CASC3-201ENST00000264645 ZNF580Q9UK33 172 aa11.27□□□□□ -0.61
CASC3-201ENST00000264645 PROK1P58294 105 aa11.26□□□□□ -0.61
CASC3-201ENST00000264645 IGHG2P01859 326 aa11.26□□□□□ -0.61
CASC3-201ENST00000264645 NAV2Q8IVL1 2488 aa11.26□□□□□ -0.61
CASC3-201ENST00000264645 LINC00467Q9BRT7 94 aa11.26□□□□□ -0.61
CASC3-201ENST00000264645 IGHV4-38-2P0DP08 117 aa11.25□□□□□ -0.61
CASC3-201ENST00000264645 COX7B2Q8TF08 81 aa11.25□□□□□ -0.61
CASC3-201ENST00000264645 HIVEP3Q5T1R4 2406 aa11.25□□□□□ -0.61
CASC3-201ENST00000264645 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
CASC3-201ENST00000264645 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
CASC3-201ENST00000264645 A0A096LPF7 62 aa11.24□□□□□ -0.61
CASC3-201ENST00000264645 LOC107984640A0A0U1RRK4 108 aa11.24□□□□□ -0.61
CASC3-201ENST00000264645 SLPIP03973 132 aa11.24□□□□□ -0.61
CASC3-201ENST00000264645 TIRAPP58753 221 aa11.24□□□□□ -0.61
CASC3-201ENST00000264645 RNF152Q8N8N0 203 aa11.24□□□□□ -0.61
CASC3-201ENST00000264645 COX8CQ7Z4L0 72 aa11.24□□□□□ -0.61
CASC3-201ENST00000264645 POM121L12Q8N7R1 296 aa11.24□□□□□ -0.61
CASC3-201ENST00000264645 TSHBP01222 138 aa11.24□□□□□ -0.61
CASC3-201ENST00000264645 SIRPDQ9H106 197 aa11.24□□□□□ -0.61
CASC3-201ENST00000264645 TRAV25A0A0B4J276 109 aa11.23□□□□□ -0.61
CASC3-201ENST00000264645 IGHV4-59P01825 116 aa11.23□□□□□ -0.61
CASC3-201ENST00000264645 PF4P02776 101 aa11.23□□□□□ -0.61
CASC3-201ENST00000264645 TRBV6-5A0A0K0K1A5 114 aa11.23□□□□□ -0.61
CASC3-201ENST00000264645 CLPSL1A2RUU4 121 aa11.23□□□□□ -0.61
CASC3-201ENST00000264645 F8W735 103 aaPredicted RBP11.23□□□□□ -0.61
CASC3-201ENST00000264645 C10orf105Q8TEF2 133 aa11.23□□□□□ -0.61
CASC3-201ENST00000264645 FAM240AA0A1B0GVK7 77 aa11.23□□□□□ -0.61
CASC3-201ENST00000264645 MRGPRG-AS1Q2M3A8 158 aa11.23□□□□□ -0.61
CASC3-201ENST00000264645 PKD1L2Q7Z442 2459 aa11.23□□□□□ -0.61
CASC3-201ENST00000264645 PSMG3-AS1Q96PY0 264 aa11.22□□□□□ -0.61
CASC3-201ENST00000264645 USP17L23D6RBM5 183 aa11.22□□□□□ -0.61
CASC3-201ENST00000264645 NCR3O14931 201 aa11.22□□□□□ -0.61
CASC3-201ENST00000264645 TMEM258P61165 79 aa11.22□□□□□ -0.61
CASC3-201ENST00000264645 GPHB5Q86YW7 130 aa11.22□□□□□ -0.61
CASC3-201ENST00000264645 HIVEP2P31629 2446 aa11.22□□□□□ -0.61
CASC3-201ENST00000264645 COX6B1P14854 86 aa11.22□□□□□ -0.61
CASC3-201ENST00000264645 SMIM9A6NGZ8 99 aa11.21□□□□□ -0.61
CASC3-201ENST00000264645 SERP2Q8N6R1 65 aa11.21□□□□□ -0.61
CASC3-201ENST00000264645 VPREB3Q9UKI3 123 aa11.21□□□□□ -0.61
CASC3-201ENST00000264645 RPL18AQ02543 176 aaKnown RBP11.21□□□□□ -0.61
CASC3-201ENST00000264645 JMJD7-PLA2G4BH0Y9G9 81 aa11.21□□□□□ -0.62
CASC3-201ENST00000264645 CRYGDP07320 174 aa11.21□□□□□ -0.62
CASC3-201ENST00000264645 K7EMT4 169 aa11.2□□□□□ -0.62
CASC3-201ENST00000264645 BRK1Q8WUW1 75 aa11.2□□□□□ -0.62
CASC3-201ENST00000264645 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 266.2 ms