RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TRAV1-1A0A0B4J248 108 aa7.9□□□□□ -1.14
TRAF4-202ENST00000262396 RNASEKQ6P5S7 137 aaKnown RBP7.9□□□□□ -1.14
TRAF4-202ENST00000262396 A0A1B0GUV1 79 aa7.89□□□□□ -1.15
TRAF4-202ENST00000262396 C19orf71A6NCJ1 209 aa7.89□□□□□ -1.15
TRAF4-202ENST00000262396 TAGLN2P37802 199 aaKnown RBP7.89□□□□□ -1.15
TRAF4-202ENST00000262396 C20orf203Q8NBC4 194 aa7.89□□□□□ -1.15
TRAF4-202ENST00000262396 PGLYRP4Q96LB8 373 aa7.89□□□□□ -1.15
TRAF4-202ENST00000262396 PLA2G2DQ9UNK4 145 aa7.89□□□□□ -1.15
TRAF4-202ENST00000262396 IGLV4-60A0A075B6I1 120 aa7.88□□□□□ -1.15
TRAF4-202ENST00000262396 GAGE12HA6NDE8 117 aa7.88□□□□□ -1.15
TRAF4-202ENST00000262396 BCL2P10415 239 aa7.88□□□□□ -1.15
TRAF4-202ENST00000262396 NUDT10Q8NFP7 164 aa7.88□□□□□ -1.15
TRAF4-202ENST00000262396 C7orf33Q8WU49 177 aa7.88□□□□□ -1.15
TRAF4-202ENST00000262396 BORCS7Q96B45 105 aa7.88□□□□□ -1.15
TRAF4-202ENST00000262396 NUDT11Q96G61 164 aa7.88□□□□□ -1.15
TRAF4-202ENST00000262396 RPP21Q9H633 154 aaKnown RBP7.88□□□□□ -1.15
TRAF4-202ENST00000262396 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
TRAF4-202ENST00000262396 APCSP02743 223 aa7.87□□□□□ -1.15
TRAF4-202ENST00000262396 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
TRAF4-202ENST00000262396 SDIM1Q6ZPB5 146 aa7.87□□□□□ -1.15
TRAF4-202ENST00000262396 TMEM101Q96IK0 257 aa7.87□□□□□ -1.15
TRAF4-202ENST00000262396 BTF3L4Q96K17 158 aa7.87□□□□□ -1.15
TRAF4-202ENST00000262396 CEBPGP53567 150 aa7.86□□□□□ -1.15
TRAF4-202ENST00000262396 SLC51BQ86UW2 128 aa7.86□□□□□ -1.15
TRAF4-202ENST00000262396 C9orf62Q8N4C0 152 aa7.86□□□□□ -1.15
TRAF4-202ENST00000262396 RNASE7Q9H1E1 156 aaKnown RBP7.86□□□□□ -1.15
TRAF4-202ENST00000262396 TRAV26-2A0A0B4J265 109 aa7.85□□□□□ -1.15
TRAF4-202ENST00000262396 A0A1B0GVG6 124 aa7.85□□□□□ -1.15
TRAF4-202ENST00000262396 GATCO43716 136 aaKnown RBP7.85□□□□□ -1.15
TRAF4-202ENST00000262396 PMCHP20382 165 aa7.85□□□□□ -1.15
TRAF4-202ENST00000262396 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
TRAF4-202ENST00000262396 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
TRAF4-202ENST00000262396 KRTAP26-1Q6PEX3 210 aa7.85□□□□□ -1.15
TRAF4-202ENST00000262396 TEX261Q6UWH6 196 aa7.85□□□□□ -1.15
TRAF4-202ENST00000262396 RNF185Q96GF1 192 aa7.85□□□□□ -1.15
TRAF4-202ENST00000262396 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.84□□□□□ -1.15
TRAF4-202ENST00000262396 IGKV2-29A2NJV5 120 aaPredicted RBP7.84□□□□□ -1.15
TRAF4-202ENST00000262396 NCR2O95944 276 aa7.84□□□□□ -1.15
TRAF4-202ENST00000262396 CHTF8P0CG12 524 aa7.84□□□□□ -1.15
TRAF4-202ENST00000262396 CTRLP40313 264 aa7.84□□□□□ -1.15
TRAF4-202ENST00000262396 RPS10P46783 165 aaKnown RBP7.84□□□□□ -1.15
TRAF4-202ENST00000262396 MAJINQ3KP22 176 aa7.84□□□□□ -1.15
TRAF4-202ENST00000262396 GATD1Q8NB37 220 aa7.84□□□□□ -1.15
TRAF4-202ENST00000262396 GTSF1Q8WW33 167 aa7.84□□□□□ -1.15
TRAF4-202ENST00000262396 GFRA4Q9GZZ7 299 aa7.84□□□□□ -1.15
TRAF4-202ENST00000262396 TRBV20OR9-2A0A075B6H5 130 aa7.83□□□□□ -1.16
TRAF4-202ENST00000262396 A0A087WYN8 130 aa7.83□□□□□ -1.16
TRAF4-202ENST00000262396 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
TRAF4-202ENST00000262396 PANO1I0J062 215 aa7.83□□□□□ -1.16
TRAF4-202ENST00000262396 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
TRAF4-202ENST00000262396 PKIGQ9Y2B9 76 aa7.83□□□□□ -1.16
TRAF4-202ENST00000262396 SDHAF1A6NFY7 115 aa7.82□□□□□ -1.16
TRAF4-202ENST00000262396 A8MWL6 223 aa7.82□□□□□ -1.16
TRAF4-202ENST00000262396 COX6A2Q02221 97 aa7.82□□□□□ -1.16
TRAF4-202ENST00000262396 Q6ZRU5 148 aa7.82□□□□□ -1.16
TRAF4-202ENST00000262396 OCC1Q8TAD7 63 aa7.82□□□□□ -1.16
TRAF4-202ENST00000262396 RPL39LQ96EH5 51 aaKnown RBP7.82□□□□□ -1.16
TRAF4-202ENST00000262396 H7C423 109 aa7.81□□□□□ -1.16
TRAF4-202ENST00000262396 I3L3M4 83 aa7.81□□□□□ -1.16
TRAF4-202ENST00000262396 NDUFS6O75380 124 aaKnown RBP7.81□□□□□ -1.16
TRAF4-202ENST00000262396 FGF6P10767 208 aa7.81□□□□□ -1.16
TRAF4-202ENST00000262396 XCL1P47992 114 aa7.81□□□□□ -1.16
TRAF4-202ENST00000262396 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
TRAF4-202ENST00000262396 BLOC1S1P78537 153 aa7.81□□□□□ -1.16
TRAF4-202ENST00000262396 OR5A1Q8NGJ0 315 aa7.81□□□□□ -1.16
TRAF4-202ENST00000262396 K7EN84 100 aa7.8□□□□□ -1.16
TRAF4-202ENST00000262396 ZNF25P17030 456 aaPredicted RBP7.8□□□□□ -1.16
TRAF4-202ENST00000262396 SS18Q15532 418 aa7.8□□□□□ -1.16
TRAF4-202ENST00000262396 STPG4Q8N801 248 aa7.8□□□□□ -1.16
TRAF4-202ENST00000262396 LYPD6BQ8NI32 183 aa7.8□□□□□ -1.16
TRAF4-202ENST00000262396 SPACA4Q8TDM5 124 aa7.8□□□□□ -1.16
TRAF4-202ENST00000262396 MRAP2Q96G30 205 aa7.8□□□□□ -1.16
TRAF4-202ENST00000262396 CNFNQ9BYD5 112 aa7.8□□□□□ -1.16
TRAF4-202ENST00000262396 ST20Q9HBF5 79 aa7.8□□□□□ -1.16
TRAF4-202ENST00000262396 PHOX2AO14813 284 aa7.79□□□□□ -1.16
TRAF4-202ENST00000262396 CIRBPQ14011 172 aaKnown RBP7.79□□□□□ -1.16
TRAF4-202ENST00000262396 C15orf56Q8N910 161 aa7.79□□□□□ -1.16
TRAF4-202ENST00000262396 EIF5A2Q9GZV4 153 aaKnown RBP7.79□□□□□ -1.16
TRAF4-202ENST00000262396 TMEM250H0YL14 139 aa7.78□□□□□ -1.16
TRAF4-202ENST00000262396 ZNF561-AS1K7EIQ3 104 aa7.78□□□□□ -1.16
TRAF4-202ENST00000262396 SLPIP03973 132 aa7.78□□□□□ -1.16
TRAF4-202ENST00000262396 MALP21145 153 aa7.78□□□□□ -1.16
TRAF4-202ENST00000262396 FCER1GP30273 86 aa7.78□□□□□ -1.16
TRAF4-202ENST00000262396 FOXA3P55318 350 aaPredicted RBP7.78□□□□□ -1.16
TRAF4-202ENST00000262396 SMAGPQ0VAQ4 97 aa7.78□□□□□ -1.16
TRAF4-202ENST00000262396 PRSS3P2Q8NHM4 247 aa7.78□□□□□ -1.16
TRAF4-202ENST00000262396 LINC00474Q9P2X8 69 aa7.78□□□□□ -1.16
TRAF4-202ENST00000262396 LRP1Q07954 4544 aaKnown RBP7.78□□□□□ -1.16
TRAF4-202ENST00000262396 IGHV1-58A0A0C4DH39 117 aa7.77□□□□□ -1.17
TRAF4-202ENST00000262396 CCL25O15444 150 aa7.77□□□□□ -1.17
TRAF4-202ENST00000262396 ALKAL2Q6UX46 152 aa7.77□□□□□ -1.17
TRAF4-202ENST00000262396 TMEM242Q9NWH2 141 aa7.77□□□□□ -1.17
TRAF4-202ENST00000262396 PLAC8Q9NZF1 115 aa7.77□□□□□ -1.17
TRAF4-202ENST00000262396 GVQW2A0A096LPI5 108 aaPredicted RBP7.76□□□□□ -1.17
TRAF4-202ENST00000262396 A0A1B0GUT8 65 aa7.76□□□□□ -1.17
TRAF4-202ENST00000262396 FAM231DQ6ZW35 169 aa7.76□□□□□ -1.17
TRAF4-202ENST00000262396 ISOC2Q96AB3 205 aa7.76□□□□□ -1.17
TRAF4-202ENST00000262396 CARD19Q96LW7 228 aa7.76□□□□□ -1.17
TRAF4-202ENST00000262396 SMIM7Q9BQ49 75 aa7.76□□□□□ -1.17
TRAF4-202ENST00000262396 FAT3Q8TDW7 4589 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms