RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 C9orf85Q96MD7 179 aa9.96□□□□□ -0.82
VMP1-201ENST00000262291 KIR2DL4Q99706 377 aa9.96□□□□□ -0.82
VMP1-201ENST00000262291 LOC107984156A0A0G2JMH3 177 aa9.95□□□□□ -0.82
VMP1-201ENST00000262291 PSMB2P49721 201 aa9.95□□□□□ -0.82
VMP1-201ENST00000262291 GAGE5Q13069 117 aa9.95□□□□□ -0.82
VMP1-201ENST00000262291 GAGE6Q13070 117 aa9.95□□□□□ -0.82
VMP1-201ENST00000262291 ZNF876PQ49A33 203 aa9.95□□□□□ -0.82
VMP1-201ENST00000262291 ARL17AQ8IVW1 177 aa9.95□□□□□ -0.82
VMP1-201ENST00000262291 C16orf95Q9H693 158 aa9.95□□□□□ -0.82
VMP1-201ENST00000262291 ZNF56Q15929 161 aa9.95□□□□□ -0.82
VMP1-201ENST00000262291 TRBV20-1A0A075B6N2 111 aa9.94□□□□□ -0.82
VMP1-201ENST00000262291 NXPH4O95158 308 aa9.94□□□□□ -0.82
VMP1-201ENST00000262291 CFAP126Q5VTH2 177 aa9.94□□□□□ -0.82
VMP1-201ENST00000262291 ZFP2Q6ZN57 461 aa9.94□□□□□ -0.82
VMP1-201ENST00000262291 MRPL35Q9NZE8 188 aaKnown RBP9.94□□□□□ -0.82
VMP1-201ENST00000262291 ADARB2-AS1A8MUL3 147 aa9.94□□□□□ -0.82
VMP1-201ENST00000262291 MORN3Q6PF18 240 aaPredicted RBP9.94□□□□□ -0.82
VMP1-201ENST00000262291 LINC01587Q99440 93 aa9.94□□□□□ -0.82
VMP1-201ENST00000262291 VWFP04275 2813 aa9.94□□□□□ -0.82
VMP1-201ENST00000262291 PROK1P58294 105 aa9.93□□□□□ -0.82
VMP1-201ENST00000262291 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
VMP1-201ENST00000262291 NACAE9PAV3 2078 aa9.93□□□□□ -0.82
VMP1-201ENST00000262291 DPM2O94777 84 aa9.93□□□□□ -0.82
VMP1-201ENST00000262291 ZMAT4Q9H898 229 aa9.93□□□□□ -0.82
VMP1-201ENST00000262291 TENM1Q9UKZ4 2725 aa9.93□□□□□ -0.82
VMP1-201ENST00000262291 LINC01546A6NGU7 62 aa9.92□□□□□ -0.82
VMP1-201ENST00000262291 CRYGDP07320 174 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 P0DMU3 169 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 FAM231AP0DMU4 169 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 FAM231CP0DMU5 169 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 STHQ8IWL8 128 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 NHLRC4P0CG21 123 aaPredicted RBP9.91□□□□□ -0.82
VMP1-201ENST00000262291 ZFAND6Q6FIF0 208 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 LINC01549A6NIU2 74 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 CCDC179H3BU77 68 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 SPATA3Q8NHX4 192 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 Q9UF83 564 aa9.91□□□□□ -0.82
VMP1-201ENST00000262291 TRGV11A0A075B6L2 103 aa9.9□□□□□ -0.82
VMP1-201ENST00000262291 RPL35AP18077 110 aaKnown RBP9.9□□□□□ -0.82
VMP1-201ENST00000262291 TRAV2A0A0B4J234 112 aa9.9□□□□□ -0.83
VMP1-201ENST00000262291 TRBV7-3A0A075B6L6 115 aa9.89□□□□□ -0.83
VMP1-201ENST00000262291 RPL39P62891 51 aaKnown RBP9.89□□□□□ -0.83
VMP1-201ENST00000262291 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
VMP1-201ENST00000262291 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
VMP1-201ENST00000262291 ATRQ13535 2644 aa9.89□□□□□ -0.83
VMP1-201ENST00000262291 SDHAF1A6NFY7 115 aa9.88□□□□□ -0.83
VMP1-201ENST00000262291 A8MTW9 85 aa9.88□□□□□ -0.83
VMP1-201ENST00000262291 C2orf66Q6UXQ4 117 aa9.88□□□□□ -0.83
VMP1-201ENST00000262291 M0QY20 66 aa9.87□□□□□ -0.83
VMP1-201ENST00000262291 NDUFA7O95182 113 aa9.87□□□□□ -0.83
VMP1-201ENST00000262291 INSP01308 110 aa9.87□□□□□ -0.83
VMP1-201ENST00000262291 POM121L12Q8N7R1 296 aa9.87□□□□□ -0.83
VMP1-201ENST00000262291 PPDPFLQ8WWR9 84 aa9.87□□□□□ -0.83
VMP1-201ENST00000262291 Q6ZSN1 163 aa9.87□□□□□ -0.83
VMP1-201ENST00000262291 ATP6V0E2Q8NHE4 81 aa9.87□□□□□ -0.83
VMP1-201ENST00000262291 F8P00451 2351 aa9.86□□□□□ -0.83
VMP1-201ENST00000262291 ORMDL2Q53FV1 153 aa9.86□□□□□ -0.83
VMP1-201ENST00000262291 C1orf158Q8N1D5 194 aa9.86□□□□□ -0.83
VMP1-201ENST00000262291 TRAV25A0A0B4J276 109 aa9.86□□□□□ -0.83
VMP1-201ENST00000262291 ATP5LO75964 103 aa9.86□□□□□ -0.83
VMP1-201ENST00000262291 PF4P02776 101 aa9.86□□□□□ -0.83
VMP1-201ENST00000262291 EMP1P54849 157 aa9.86□□□□□ -0.83
VMP1-201ENST00000262291 TEN1Q86WV5 123 aa9.86□□□□□ -0.83
VMP1-201ENST00000262291 POLR2KP53803 58 aaKnown RBP9.85□□□□□ -0.83
VMP1-201ENST00000262291 TAL2Q16559 108 aa9.85□□□□□ -0.83
VMP1-201ENST00000262291 TRPT1Q86TN4 253 aaKnown RBP9.85□□□□□ -0.83
VMP1-201ENST00000262291 C3orf56Q8N813 242 aa9.85□□□□□ -0.83
VMP1-201ENST00000262291 TP53TG1Q9Y2A0 90 aa9.85□□□□□ -0.83
VMP1-201ENST00000262291 CRLF1O75462 422 aa9.85□□□□□ -0.83
VMP1-201ENST00000262291 ANKRD29Q8N6D5 301 aa9.85□□□□□ -0.83
VMP1-201ENST00000262291 TOMM6Q96B49 74 aa9.85□□□□□ -0.83
VMP1-201ENST00000262291 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
VMP1-201ENST00000262291 TRAV4A0A0B4J268 109 aa9.84□□□□□ -0.83
VMP1-201ENST00000262291 IGLV1-51P01701 117 aa9.84□□□□□ -0.83
VMP1-201ENST00000262291 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
VMP1-201ENST00000262291 C11orf72Q8NBR9 251 aa9.84□□□□□ -0.83
VMP1-201ENST00000262291 M0R2P5 195 aa9.84□□□□□ -0.83
VMP1-201ENST00000262291 TCL1BO95988 128 aa9.84□□□□□ -0.83
VMP1-201ENST00000262291 OPRPNQ99935 248 aaPredicted RBP9.84□□□□□ -0.83
VMP1-201ENST00000262291 MYMXA0A1B0GTQ4 84 aa9.84□□□□□ -0.84
VMP1-201ENST00000262291 NBEAL2Q6ZNJ1 2754 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 TEP1Q99973 2627 aaKnown RBP9.83□□□□□ -0.84
VMP1-201ENST00000262291 GAGE12JA6NER3 117 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 VCYO14598 125 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 GAGE7O76087 117 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 IGHV3-53P01767 116 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 GAGE12FP0CL80 117 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 GAGE12GP0CL81 117 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 GAGE12IP0CL82 117 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 NDUFV3P56181 108 aaKnown RBP9.83□□□□□ -0.84
VMP1-201ENST00000262291 GAGE4Q13068 117 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 SRSF9Q13242 221 aaKnown RBP eCLIP9.83□□□□□ -0.84
VMP1-201ENST00000262291 PPP1R17O96001 155 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 SCGB1D4Q6XE38 83 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 PLEKHB2Q96CS7 222 aa9.83□□□□□ -0.84
VMP1-201ENST00000262291 GIG44P09565 113 aaPredicted RBP9.82□□□□□ -0.84
VMP1-201ENST00000262291 GAGE2BQ13066 116 aa9.82□□□□□ -0.84
VMP1-201ENST00000262291 GAGE2EQ4V326 116 aa9.82□□□□□ -0.84
VMP1-201ENST00000262291 BAALCQ8WXS3 180 aa9.82□□□□□ -0.84
VMP1-201ENST00000262291 GAGE2DQ9UEU5 116 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms