RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 FAM30AQ9NZY2 134 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 ERC2-IT1O76042 136 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 C20orf203Q8NBC4 194 aa5□□□□□ -1.61
PDGFRA-201ENST00000257290 MED13Q9UHV7 2174 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 ARHGAP21Q5T5U3 1957 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 IGKV1D-17A0A075B6S4 117 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 ZNF503-AS2A6NEH8 195 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 DSCAML1Q8TD84 2053 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 IGHV3-73A0A0B4J1V6 119 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 RNF5Q99942 180 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 TRAV22A0A0B4J277 110 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 ARHGEF17Q96PE2 2063 aaPredicted RBP4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 P0C879 139 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 ITLN2Q8WWU7 325 aaPredicted RBP4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 TM2D3Q9BRN9 247 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 ESPL1Q14674 2120 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 TRIOBPQ9H2D6 2365 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 ZNF318Q5VUA4 2279 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 MED14OSP0DP75 135 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 C22orf34Q6ZV56 151 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 BPESC1Q9GZL8 116 aa4.99□□□□□ -1.61
PDGFRA-201ENST00000257290 TNRC6BQ9UPQ9 1833 aaKnown RBP4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 E7EQL1 145 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 DIRC1Q969H9 104 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 LINC01547P58512 204 aaPredicted RBP4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 ADAMTSL4-AS1Q5T5F5 129 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 BRWD1Q9NSI6 2320 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 WT1-ASQ06250 92 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 SHANK1Q9Y566 2161 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 INTS1Q8N201 2190 aaKnown RBP4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 IGKV1OR2-108A0A075B7D4 117 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 IGKV1-16P04430 117 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 MINOS1Q5TGZ0 78 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 MINOS1-NBL1R4GNA1 71 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 KMT2EQ8IZD2 1858 aa4.98□□□□□ -1.61
PDGFRA-201ENST00000257290 IGLV3-9A0A075B6K5 115 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 C6orf223Q8N319 242 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 C7orf69Q9H7B7 122 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 LYNX1G3V0Z9 82 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 NDUFA4O00483 81 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 LYNX1P0DP58 116 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 LY6EQ16553 131 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 SEM1Q6ZVN7 128 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 PCDH15Q96QU1 1955 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 GYPEP15421 78 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 FP248Q71RG6 208 aaPredicted RBP4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 SEC16AO15027 2179 aa4.97□□□□□ -1.61
PDGFRA-201ENST00000257290 TANC2Q9HCD6 1990 aa4.96□□□□□ -1.62
PDGFRA-201ENST00000257290 NTM-AS1Q6ZSK4 140 aa4.96□□□□□ -1.62
PDGFRA-201ENST00000257290 HIGD2AQ9BW72 106 aa4.96□□□□□ -1.62
PDGFRA-201ENST00000257290 IGHV3OR16-10A0A075B7F0 116 aa4.96□□□□□ -1.62
PDGFRA-201ENST00000257290 REG3AQ06141 175 aa4.96□□□□□ -1.62
PDGFRA-201ENST00000257290 Q1T7F1 81 aa4.96□□□□□ -1.62
PDGFRA-201ENST00000257290 PLCE1Q9P212 2302 aa4.96□□□□□ -1.62
PDGFRA-201ENST00000257290 ZNF491Q8N8L2 437 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 ETDCA0A1B0GVM5 59 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 GPHB5Q86YW7 130 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 RITA1Q96K30 269 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 IGHV3OR16-12A0A075B7B8 117 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 ARHGAP32A7KAX9 2087 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 IGKV2-29A2NJV5 120 aaPredicted RBP4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 OXTP01178 125 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 SMIM11BQ8TCY0 68 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 NUP210LQ5VU65 1888 aa4.95□□□□□ -1.62
PDGFRA-201ENST00000257290 IGLV2-14P01704 120 aa4.94□□□□□ -1.62
PDGFRA-201ENST00000257290 RNASE3P12724 160 aaKnown RBP4.94□□□□□ -1.62
PDGFRA-201ENST00000257290 TSPEAR-AS2P59090 65 aa4.94□□□□□ -1.62
PDGFRA-201ENST00000257290 LYPD2Q6UXB3 125 aa4.94□□□□□ -1.62
PDGFRA-201ENST00000257290 Q8N9L7 120 aa4.94□□□□□ -1.62
PDGFRA-201ENST00000257290 PRR26Q8N8Z3 221 aa4.94□□□□□ -1.62
PDGFRA-201ENST00000257290 CACNA1IQ9P0X4 2223 aa4.94□□□□□ -1.62
PDGFRA-201ENST00000257290 FGF23Q9GZV9 251 aaPredicted RBP4.94□□□□□ -1.62
PDGFRA-201ENST00000257290 SYCNQ0VAF6 134 aa4.94□□□□□ -1.62
PDGFRA-201ENST00000257290 B4DSR2 109 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 E7EUB6 86 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 ZNF833PQ6ZTB9 187 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 KLK9Q9UKQ9 250 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 AGRNO00468 2067 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 Q8N7P7 452 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 IGLV4-69A0A075B6H9 119 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 IGLV4-3A0A075B6K6 122 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 LY6HO94772 140 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 C17orf58Q2M2W7 97 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 Q6ZSV7 163 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 LINC00588Q9Y4M8 146 aa4.93□□□□□ -1.62
PDGFRA-201ENST00000257290 LOC101927531A0A1B0GV80 90 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 CRIP1P50238 77 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 KAAG1Q9UBP8 84 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 TRGV2A0A075B6R0 118 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 TRAV10A0A0B4J240 114 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 TRBV6-5A0A0K0K1A5 114 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 GNRH2O43555 120 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 PSMG3-AS1Q96PY0 264 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 LRP4O75096 1905 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 IGHV3-38A0A0C4DH36 116 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 CNFNQ9BYD5 112 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms