RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 IGHV4-30-4P0DP06 118 aa13.53□□□□□ -0.24
TRIM47-201ENST00000254816 PLNP26678 52 aa13.53□□□□□ -0.24
TRIM47-201ENST00000254816 DAZ2Q13117 558 aaKnown RBP13.53□□□□□ -0.24
TRIM47-201ENST00000254816 DEFB135Q30KP9 77 aa13.53□□□□□ -0.24
TRIM47-201ENST00000254816 ZNF479Q96JC4 524 aa13.53□□□□□ -0.24
TRIM47-201ENST00000254816 CHTOPQ9Y3Y2 248 aaKnown RBP13.53□□□□□ -0.24
TRIM47-201ENST00000254816 TRAV12-1A0A0B4J245 112 aa13.52□□□□□ -0.24
TRIM47-201ENST00000254816 A6NDN8 102 aa13.52□□□□□ -0.24
TRIM47-201ENST00000254816 F8VRH5 84 aa13.52□□□□□ -0.24
TRIM47-201ENST00000254816 K7EP13 123 aa13.52□□□□□ -0.24
TRIM47-201ENST00000254816 MAPKAPK5-AS1Q8N8E1 139 aa13.52□□□□□ -0.24
TRIM47-201ENST00000254816 NEXN-AS1Q8NBZ9 246 aa13.52□□□□□ -0.24
TRIM47-201ENST00000254816 BAALCQ8WXS3 180 aa13.52□□□□□ -0.24
TRIM47-201ENST00000254816 CHAC1Q9BUX1 264 aa13.52□□□□□ -0.24
TRIM47-201ENST00000254816 TRBV25-1A0A075B6N4 114 aa13.52□□□□□ -0.25
TRIM47-201ENST00000254816 GAGE12BA1L429 117 aa13.52□□□□□ -0.25
TRIM47-201ENST00000254816 GAGE7O76087 117 aa13.52□□□□□ -0.25
TRIM47-201ENST00000254816 GAGE12FP0CL80 117 aa13.52□□□□□ -0.25
TRIM47-201ENST00000254816 GAGE12GP0CL81 117 aa13.52□□□□□ -0.25
TRIM47-201ENST00000254816 GAGE12IP0CL82 117 aa13.52□□□□□ -0.25
TRIM47-201ENST00000254816 X6R8D5 127 aa13.52□□□□□ -0.25
TRIM47-201ENST00000254816 K7EMI3 77 aa13.51□□□□□ -0.25
TRIM47-201ENST00000254816 VCYO14598 125 aa13.51□□□□□ -0.25
TRIM47-201ENST00000254816 RAB37Q96AX2 223 aa13.51□□□□□ -0.25
TRIM47-201ENST00000254816 RHODO00212 210 aa13.51□□□□□ -0.25
TRIM47-201ENST00000254816 GCSHP23434 173 aa13.51□□□□□ -0.25
TRIM47-201ENST00000254816 APOC4P55056 127 aa13.51□□□□□ -0.25
TRIM47-201ENST00000254816 RPL32P62910 135 aaKnown RBP13.5□□□□□ -0.25
TRIM47-201ENST00000254816 KIR2DL5BQ8NHK3 375 aa13.5□□□□□ -0.25
TRIM47-201ENST00000254816 OVOL2Q9BRP0 275 aa13.5□□□□□ -0.25
TRIM47-201ENST00000254816 EDA2RQ9HAV5 297 aa13.5□□□□□ -0.25
TRIM47-201ENST00000254816 TP53TG1Q9Y2A0 90 aa13.5□□□□□ -0.25
TRIM47-201ENST00000254816 TRBV27A0A0K0K1C4 114 aa13.49□□□□□ -0.25
TRIM47-201ENST00000254816 G3V4G9 280 aa13.49□□□□□ -0.25
TRIM47-201ENST00000254816 KIR2DL4Q99706 377 aa13.49□□□□□ -0.25
TRIM47-201ENST00000254816 PRSS29PA6NIE9 313 aa13.48□□□□□ -0.25
TRIM47-201ENST00000254816 H3BRM9 83 aa13.48□□□□□ -0.25
TRIM47-201ENST00000254816 FXYD2P54710 66 aa13.48□□□□□ -0.25
TRIM47-201ENST00000254816 RPL39P62891 51 aaKnown RBP13.48□□□□□ -0.25
TRIM47-201ENST00000254816 ZFP2Q6ZN57 461 aa13.48□□□□□ -0.25
TRIM47-201ENST00000254816 HIGD1BQ9P298 99 aa13.48□□□□□ -0.25
TRIM47-201ENST00000254816 TRAV4A0A0B4J268 109 aa13.48□□□□□ -0.25
TRIM47-201ENST00000254816 CYSLTR1Q9Y271 337 aa13.48□□□□□ -0.25
TRIM47-201ENST00000254816 ANK2Q01484 3957 aa13.47□□□□□ -0.25
TRIM47-201ENST00000254816 TRGV2A0A075B6R0 118 aa13.47□□□□□ -0.25
TRIM47-201ENST00000254816 H3BUT2 72 aa13.47□□□□□ -0.25
TRIM47-201ENST00000254816 EGFEM1PQ0D2K5 195 aa13.47□□□□□ -0.25
TRIM47-201ENST00000254816 TNFRSF18Q9Y5U5 241 aa13.47□□□□□ -0.25
TRIM47-201ENST00000254816 C9orf118A6NHY6 69 aa13.46□□□□□ -0.25
TRIM47-201ENST00000254816 TSHBP01222 138 aa13.46□□□□□ -0.25
TRIM47-201ENST00000254816 DEFB4AO15263 64 aa13.46□□□□□ -0.26
TRIM47-201ENST00000254816 DNAH3Q8TD57 4116 aa13.45□□□□□ -0.26
TRIM47-201ENST00000254816 I3L3M4 83 aa13.45□□□□□ -0.26
TRIM47-201ENST00000254816 OR11H2Q8NH07 326 aa13.45□□□□□ -0.26
TRIM47-201ENST00000254816 K7ERJ3 54 aa13.44□□□□□ -0.26
TRIM47-201ENST00000254816 DEFB130BP0DP73 79 aa13.44□□□□□ -0.26
TRIM47-201ENST00000254816 DEFB130AP0DP74 79 aa13.44□□□□□ -0.26
TRIM47-201ENST00000254816 IGHV3-38A0A0C4DH36 116 aa13.43□□□□□ -0.26
TRIM47-201ENST00000254816 SMIM9A6NGZ8 99 aa13.43□□□□□ -0.26
TRIM47-201ENST00000254816 IGIPA6NJ69 53 aa13.43□□□□□ -0.26
TRIM47-201ENST00000254816 RIPPLY3P57055 190 aa13.43□□□□□ -0.26
TRIM47-201ENST00000254816 PHLDA1Q8WV24 401 aaPredicted RBP13.43□□□□□ -0.26
TRIM47-201ENST00000254816 SLC25A29Q8N8R3 303 aa13.42□□□□□ -0.26
TRIM47-201ENST00000254816 MDFIQ99750 246 aa13.42□□□□□ -0.26
TRIM47-201ENST00000254816 CEND1Q8N111 149 aa13.42□□□□□ -0.26
TRIM47-201ENST00000254816 GAGE10A6NGK3 116 aa13.41□□□□□ -0.26
TRIM47-201ENST00000254816 K7EQD1 137 aa13.41□□□□□ -0.26
TRIM47-201ENST00000254816 ZNRF2Q8NHG8 242 aa13.41□□□□□ -0.26
TRIM47-201ENST00000254816 PRADC1Q9BSG0 188 aa13.41□□□□□ -0.26
TRIM47-201ENST00000254816 IGLV4-69A0A075B6H9 119 aa13.41□□□□□ -0.26
TRIM47-201ENST00000254816 IGHV4-28A0A0C4DH34 117 aa13.41□□□□□ -0.26
TRIM47-201ENST00000254816 SMIM13P0DJ93 91 aa13.41□□□□□ -0.26
TRIM47-201ENST00000254816 DNAJC30Q96LL9 226 aa13.41□□□□□ -0.26
TRIM47-201ENST00000254816 NHP2Q9NX24 153 aaKnown RBP13.41□□□□□ -0.26
TRIM47-201ENST00000254816 MYMXA0A1B0GTQ4 84 aa13.4□□□□□ -0.26
TRIM47-201ENST00000254816 C11orf86A6NJI1 115 aa13.4□□□□□ -0.26
TRIM47-201ENST00000254816 FAM222AQ5U5X8 452 aa13.39□□□□□ -0.27
TRIM47-201ENST00000254816 RNF183Q96D59 192 aa13.39□□□□□ -0.27
TRIM47-201ENST00000254816 TRGV4A0A0C4DH28 118 aa13.39□□□□□ -0.27
TRIM47-201ENST00000254816 RHOHQ15669 191 aa13.39□□□□□ -0.27
TRIM47-201ENST00000254816 HIST1H4GQ99525 98 aa13.39□□□□□ -0.27
TRIM47-201ENST00000254816 OPRPNQ99935 248 aaPredicted RBP13.39□□□□□ -0.27
TRIM47-201ENST00000254816 TM2D2Q9BX73 214 aa13.39□□□□□ -0.27
TRIM47-201ENST00000254816 CST9LQ9H4G1 147 aa13.39□□□□□ -0.27
TRIM47-201ENST00000254816 LOC100131303A0A0U1RQF7 123 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 E9PLD3 99 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 PMVKQ15126 192 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 A0A1W2PPM0 123 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 GAGE12JA6NER3 117 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 GAGE4Q13068 117 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 GAGE5Q13069 117 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 FHL2Q14192 279 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 GAGE13Q4V321 117 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 SAMD5Q5TGI4 173 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 LINC00612Q8N6U2 182 aa13.38□□□□□ -0.27
TRIM47-201ENST00000254816 TRBV7-3A0A075B6L6 115 aa13.37□□□□□ -0.27
TRIM47-201ENST00000254816 Q8NAQ8 132 aa13.37□□□□□ -0.27
TRIM47-201ENST00000254816 TMEM141Q96I45 108 aa13.37□□□□□ -0.27
TRIM47-201ENST00000254816 TIMM17AQ99595 171 aa13.37□□□□□ -0.27
TRIM47-201ENST00000254816 K7EP34 96 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms