RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 TRAV12-2A0A075B6T6 113 aa13.65□□□□□ -0.22
PTPN12-201ENST00000248594 A0A087WVE0 104 aa13.65□□□□□ -0.22
PTPN12-201ENST00000248594 C9orf47Q6ZRZ4 202 aa13.65□□□□□ -0.22
PTPN12-201ENST00000248594 E7EQL1 145 aa13.65□□□□□ -0.22
PTPN12-201ENST00000248594 KLK9Q9UKQ9 250 aa13.65□□□□□ -0.22
PTPN12-201ENST00000248594 CELSR2Q9HCU4 2923 aa13.65□□□□□ -0.23
PTPN12-201ENST00000248594 IGHV7-81A0A0B4J1V7 117 aa13.64□□□□□ -0.23
PTPN12-201ENST00000248594 LINC00526Q96FQ7 95 aa13.64□□□□□ -0.23
PTPN12-201ENST00000248594 TIMM17AQ99595 171 aa13.64□□□□□ -0.23
PTPN12-201ENST00000248594 POLR2KP53803 58 aaKnown RBP13.63□□□□□ -0.23
PTPN12-201ENST00000248594 BAALC-AS2P0C853 105 aa13.63□□□□□ -0.23
PTPN12-201ENST00000248594 ZFYVE26Q68DK2 2539 aa13.63□□□□□ -0.23
PTPN12-201ENST00000248594 COX7CP15954 63 aa13.62□□□□□ -0.23
PTPN12-201ENST00000248594 RNF5Q99942 180 aa13.62□□□□□ -0.23
PTPN12-201ENST00000248594 LINC00643Q86TS7 51 aa13.62□□□□□ -0.23
PTPN12-201ENST00000248594 NUP37Q8NFH4 326 aa13.62□□□□□ -0.23
PTPN12-201ENST00000248594 CCDC140Q96MF4 163 aa13.62□□□□□ -0.23
PTPN12-201ENST00000248594 UTP20O75691 2785 aaKnown RBP13.61□□□□□ -0.23
PTPN12-201ENST00000248594 TMEM219Q86XT9 240 aa13.61□□□□□ -0.23
PTPN12-201ENST00000248594 KAAG1Q9UBP8 84 aa13.61□□□□□ -0.23
PTPN12-201ENST00000248594 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.61□□□□□ -0.23
PTPN12-201ENST00000248594 KNCNA6PVL3 124 aa13.61□□□□□ -0.23
PTPN12-201ENST00000248594 WIPF1O43516 503 aa13.61□□□□□ -0.23
PTPN12-201ENST00000248594 C10orf105Q8TEF2 133 aa13.61□□□□□ -0.23
PTPN12-201ENST00000248594 UNQ9165/PRO28630Q6UXU0 137 aa13.6□□□□□ -0.23
PTPN12-201ENST00000248594 LRRC75A-AS1Q8N1F1 130 aa13.6□□□□□ -0.23
PTPN12-201ENST00000248594 HIST1H4AP62805 103 aaKnown RBP13.6□□□□□ -0.23
PTPN12-201ENST00000248594 LY6LH3BQJ8 138 aa13.6□□□□□ -0.23
PTPN12-201ENST00000248594 PEMTQ9UBM1 199 aa13.6□□□□□ -0.23
PTPN12-201ENST00000248594 ZANQ9Y493 2812 aa13.59□□□□□ -0.23
PTPN12-201ENST00000248594 ACACBO00763 2458 aa13.59□□□□□ -0.23
PTPN12-201ENST00000248594 TRBV12-3P01733 135 aa13.59□□□□□ -0.23
PTPN12-201ENST00000248594 TMEM61Q8N0U2 210 aa13.59□□□□□ -0.23
PTPN12-201ENST00000248594 IGLV4-3A0A075B6K6 122 aa13.58□□□□□ -0.23
PTPN12-201ENST00000248594 FAM240AA0A1B0GVK7 77 aa13.58□□□□□ -0.24
PTPN12-201ENST00000248594 IGHV3-38A0A0C4DH36 116 aa13.58□□□□□ -0.24
PTPN12-201ENST00000248594 TIRAPP58753 221 aa13.58□□□□□ -0.24
PTPN12-201ENST00000248594 NPBQ8NG41 125 aa13.57□□□□□ -0.24
PTPN12-201ENST00000248594 LINC00315P59091 139 aa13.57□□□□□ -0.24
PTPN12-201ENST00000248594 MIAQ16674 131 aa13.57□□□□□ -0.24
PTPN12-201ENST00000248594 MYO18BQ8IUG5 2567 aa13.56□□□□□ -0.24
PTPN12-201ENST00000248594 C9orf139Q6ZV77 190 aa13.56□□□□□ -0.24
PTPN12-201ENST00000248594 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.56□□□□□ -0.24
PTPN12-201ENST00000248594 IGKV2-29A2NJV5 120 aaPredicted RBP13.56□□□□□ -0.24
PTPN12-201ENST00000248594 ITPR1Q14643 2758 aa13.55□□□□□ -0.24
PTPN12-201ENST00000248594 CCDC168Q8NDH2 2452 aa13.55□□□□□ -0.24
PTPN12-201ENST00000248594 OVOL1O14753 267 aa13.55□□□□□ -0.24
PTPN12-201ENST00000248594 DNAL4O96015 105 aa13.55□□□□□ -0.24
PTPN12-201ENST00000248594 Q8N2B8 174 aa13.55□□□□□ -0.24
PTPN12-201ENST00000248594 C20orf203Q8NBC4 194 aa13.55□□□□□ -0.24
PTPN12-201ENST00000248594 SYNJ2BPP57105 145 aa13.55□□□□□ -0.24
PTPN12-201ENST00000248594 PROK1P58294 105 aa13.55□□□□□ -0.24
PTPN12-201ENST00000248594 CIRBPQ14011 172 aaKnown RBP13.55□□□□□ -0.24
PTPN12-201ENST00000248594 TINCRA0A1B0GVN0 87 aa13.54□□□□□ -0.24
PTPN12-201ENST00000248594 TRBV7-1A0A0A6YYK4 115 aa13.54□□□□□ -0.24
PTPN12-201ENST00000248594 LITAFQ99732 161 aa13.54□□□□□ -0.24
PTPN12-201ENST00000248594 C14orf132Q9NPU4 83 aa13.54□□□□□ -0.24
PTPN12-201ENST00000248594 JMJD1CQ15652 2540 aa13.53□□□□□ -0.24
PTPN12-201ENST00000248594 Q8N9W7 124 aa13.52□□□□□ -0.24
PTPN12-201ENST00000248594 LY6G5BQ8NDX9 201 aa13.52□□□□□ -0.24
PTPN12-201ENST00000248594 KIF25-AS1Q9Y6Z4 181 aa13.52□□□□□ -0.24
PTPN12-201ENST00000248594 ACYP1P07311 99 aa13.52□□□□□ -0.25
PTPN12-201ENST00000248594 DGAT2L7PQ6IED9 249 aa13.52□□□□□ -0.25
PTPN12-201ENST00000248594 IMUPQ9GZP8 106 aa13.52□□□□□ -0.25
PTPN12-201ENST00000248594 PRM2P04554 102 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 WFDC9Q8NEX5 89 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 IGHV1-58A0A0C4DH39 117 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 TRBV27A0A0K0K1C4 114 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 ATOX1O00244 68 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 EDN2P20800 178 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 CDSNQ15517 529 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 Q9H8V8 135 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 FAM110DQ8TAY7 271 aaPredicted RBP13.51□□□□□ -0.25
PTPN12-201ENST00000248594 DPH3Q96FX2 82 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 C1orf43Q9BWL3 253 aa13.51□□□□□ -0.25
PTPN12-201ENST00000248594 IGHV4OR15-8A0A075B7B6 117 aa13.5□□□□□ -0.25
PTPN12-201ENST00000248594 A0A087WW49 117 aa13.5□□□□□ -0.25
PTPN12-201ENST00000248594 OXTP01178 125 aa13.5□□□□□ -0.25
PTPN12-201ENST00000248594 Q9UF83 564 aa13.5□□□□□ -0.25
PTPN12-201ENST00000248594 PKIGQ9Y2B9 76 aa13.5□□□□□ -0.25
PTPN12-201ENST00000248594 ABCA12Q86UK0 2595 aa13.49□□□□□ -0.25
PTPN12-201ENST00000248594 CCL21O00585 134 aa13.49□□□□□ -0.25
PTPN12-201ENST00000248594 M0QY20 66 aa13.49□□□□□ -0.25
PTPN12-201ENST00000248594 SPINK13Q1W4C9 94 aa13.49□□□□□ -0.25
PTPN12-201ENST00000248594 IGFL2Q6UWQ7 119 aa13.49□□□□□ -0.25
PTPN12-201ENST00000248594 CDKN2A-AS1Q9UH64 79 aa13.49□□□□□ -0.25
PTPN12-201ENST00000248594 FAM19A4Q96LR4 140 aa13.48□□□□□ -0.25
PTPN12-201ENST00000248594 DCANP1Q8TF63 244 aa13.48□□□□□ -0.25
PTPN12-201ENST00000248594 RNASE1P07998 156 aaKnown RBP13.48□□□□□ -0.25
PTPN12-201ENST00000248594 IGHV1-69P01742 117 aa13.47□□□□□ -0.25
PTPN12-201ENST00000248594 PIK3CD-AS1Q5SR53 167 aa13.47□□□□□ -0.25
PTPN12-201ENST00000248594 FLNCQ14315 2725 aa13.47□□□□□ -0.25
PTPN12-201ENST00000248594 VSIG2Q96IQ7 327 aa13.47□□□□□ -0.25
PTPN12-201ENST00000248594 FAM218AQ96MZ4 157 aa13.47□□□□□ -0.25
PTPN12-201ENST00000248594 COX7A2LO14548 114 aa13.46□□□□□ -0.25
PTPN12-201ENST00000248594 ATP5G1P05496 136 aa13.46□□□□□ -0.25
PTPN12-201ENST00000248594 MRPL53Q96EL3 112 aaKnown RBP13.46□□□□□ -0.25
PTPN12-201ENST00000248594 C2orf48Q96LS8 159 aa13.46□□□□□ -0.25
PTPN12-201ENST00000248594 RHPN1-AS1Q9BWJ2 59 aa13.46□□□□□ -0.25
PTPN12-201ENST00000248594 IGHV3-16A0A0C4DH30 117 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms