RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PYGO1Q9Y3Y4 419 aa15.81■□□□□ 0.12
SH2D3A-201ENST00000245908 A8MWV9 139 aa15.8■□□□□ 0.12
SH2D3A-201ENST00000245908 TMEM262E9PQX1 116 aa15.8■□□□□ 0.12
SH2D3A-201ENST00000245908 IGHV3-73A0A0B4J1V6 119 aa15.8■□□□□ 0.12
SH2D3A-201ENST00000245908 RHODO00212 210 aa15.8■□□□□ 0.12
SH2D3A-201ENST00000245908 ZFAND6Q6FIF0 208 aa15.8■□□□□ 0.12
SH2D3A-201ENST00000245908 NDUFA11Q86Y39 141 aa15.8■□□□□ 0.12
SH2D3A-201ENST00000245908 PROK1P58294 105 aa15.79■□□□□ 0.12
SH2D3A-201ENST00000245908 ZNF415Q09FC8 603 aa15.79■□□□□ 0.12
SH2D3A-201ENST00000245908 GAGE5Q13069 117 aa15.79■□□□□ 0.12
SH2D3A-201ENST00000245908 GAGE6Q13070 117 aa15.79■□□□□ 0.12
SH2D3A-201ENST00000245908 MAP6D1Q9H9H5 199 aa15.79■□□□□ 0.12
SH2D3A-201ENST00000245908 A0A0J9YXV3 536 aa15.78■□□□□ 0.12
SH2D3A-201ENST00000245908 NACAE9PAV3 2078 aa15.77■□□□□ 0.12
SH2D3A-201ENST00000245908 TCL1BO95988 128 aa15.77■□□□□ 0.12
SH2D3A-201ENST00000245908 PRM2P04554 102 aa15.77■□□□□ 0.12
SH2D3A-201ENST00000245908 FAM104AQ969W3 186 aa15.77■□□□□ 0.12
SH2D3A-201ENST00000245908 LINC00467Q9BRT7 94 aa15.77■□□□□ 0.12
SH2D3A-201ENST00000245908 TNFRSF18Q9Y5U5 241 aa15.77■□□□□ 0.12
SH2D3A-201ENST00000245908 FAM208BQ5VWN6 2430 aa15.77■□□□□ 0.11
SH2D3A-201ENST00000245908 TEX29Q8N6K0 151 aa15.77■□□□□ 0.11
SH2D3A-201ENST00000245908 DYNLRB2Q8TF09 96 aa15.77■□□□□ 0.11
SH2D3A-201ENST00000245908 Q96MF0 132 aa15.77■□□□□ 0.11
SH2D3A-201ENST00000245908 CITED1Q99966 193 aa15.77■□□□□ 0.11
SH2D3A-201ENST00000245908 CFC1BP0CG36 223 aa15.76■□□□□ 0.11
SH2D3A-201ENST00000245908 CFC1P0CG37 223 aa15.76■□□□□ 0.11
SH2D3A-201ENST00000245908 UBR5O95071 2799 aaPredicted RBP15.76■□□□□ 0.11
SH2D3A-201ENST00000245908 ZNF462Q96JM2 2506 aa15.75■□□□□ 0.11
SH2D3A-201ENST00000245908 M0QXV9 152 aa15.75■□□□□ 0.11
SH2D3A-201ENST00000245908 CD28P10747 220 aa15.75■□□□□ 0.11
SH2D3A-201ENST00000245908 KHDC1LQ5JSQ8 128 aa15.75■□□□□ 0.11
SH2D3A-201ENST00000245908 SFTA2Q6UW10 78 aa15.75■□□□□ 0.11
SH2D3A-201ENST00000245908 SS18L2Q9UHA2 77 aa15.75■□□□□ 0.11
SH2D3A-201ENST00000245908 DEFB114Q30KQ6 69 aa15.75■□□□□ 0.11
SH2D3A-201ENST00000245908 ZNF843Q8N446 348 aa15.75■□□□□ 0.11
SH2D3A-201ENST00000245908 ANKRD29Q8N6D5 301 aa15.74■□□□□ 0.11
SH2D3A-201ENST00000245908 C11orf72Q8NBR9 251 aa15.74■□□□□ 0.11
SH2D3A-201ENST00000245908 Q6ZSN1 163 aa15.74■□□□□ 0.11
SH2D3A-201ENST00000245908 RAX2Q96IS3 184 aa15.74■□□□□ 0.11
SH2D3A-201ENST00000245908 USP24Q9UPU5 2620 aa15.73■□□□□ 0.11
SH2D3A-201ENST00000245908 MRPS36P82909 103 aaKnown RBP15.73■□□□□ 0.11
SH2D3A-201ENST00000245908 LINC01587Q99440 93 aa15.73■□□□□ 0.11
SH2D3A-201ENST00000245908 CREBBPQ92793 2442 aa15.72■□□□□ 0.11
SH2D3A-201ENST00000245908 IGHV3-64A0A075B6Q5 118 aa15.72■□□□□ 0.11
SH2D3A-201ENST00000245908 KRTAP1-3Q8IUG1 177 aa15.72■□□□□ 0.11
SH2D3A-201ENST00000245908 C10orf126Q8N4M7 172 aa15.72■□□□□ 0.11
SH2D3A-201ENST00000245908 SPXQ9BT56 116 aa15.72■□□□□ 0.11
SH2D3A-201ENST00000245908 LRRK2Q5S007 2527 aa15.72■□□□□ 0.11
SH2D3A-201ENST00000245908 INSP01308 110 aa15.71■□□□□ 0.11
SH2D3A-201ENST00000245908 TMEM86BQ8N661 226 aa15.71■□□□□ 0.11
SH2D3A-201ENST00000245908 CHCHD7Q9BUK0 85 aa15.71■□□□□ 0.11
SH2D3A-201ENST00000245908 Q9UF83 564 aa15.71■□□□□ 0.11
SH2D3A-201ENST00000245908 BEAN1Q3B7T3 259 aa15.71■□□□□ 0.11
SH2D3A-201ENST00000245908 PTPN13Q12923 2485 aa15.71■□□□□ 0.11
SH2D3A-201ENST00000245908 PRO1854Q9UHT4 67 aa15.7■□□□□ 0.1
SH2D3A-201ENST00000245908 IGHV3-53P01767 116 aa15.69■□□□□ 0.1
SH2D3A-201ENST00000245908 NHLRC4P0CG21 123 aaPredicted RBP15.69■□□□□ 0.1
SH2D3A-201ENST00000245908 CEMP1Q6PRD7 247 aaPredicted RBP15.69■□□□□ 0.1
SH2D3A-201ENST00000245908 DNAJC30Q96LL9 226 aa15.69■□□□□ 0.1
SH2D3A-201ENST00000245908 SPANXA1Q9NS26 97 aa15.69■□□□□ 0.1
SH2D3A-201ENST00000245908 TEX15Q9BXT5 2789 aa15.69■□□□□ 0.1
SH2D3A-201ENST00000245908 CENPEQ02224 2701 aa15.69■□□□□ 0.1
SH2D3A-201ENST00000245908 IGHV3-30-3P0DP02 117 aa15.68■□□□□ 0.1
SH2D3A-201ENST00000245908 Q6ZSV7 163 aa15.68■□□□□ 0.1
SH2D3A-201ENST00000245908 TIMM21Q9BVV7 248 aa15.68■□□□□ 0.1
SH2D3A-201ENST00000245908 UBE2D4Q9Y2X8 147 aa15.68■□□□□ 0.1
SH2D3A-201ENST00000245908 ZFYVE26Q68DK2 2539 aa15.68■□□□□ 0.1
SH2D3A-201ENST00000245908 A4D1N5 150 aa15.68■□□□□ 0.1
SH2D3A-201ENST00000245908 RS1O15537 224 aa15.68■□□□□ 0.1
SH2D3A-201ENST00000245908 HIST2H2BDQ6DRA6 164 aa15.68■□□□□ 0.1
SH2D3A-201ENST00000245908 NAV2Q8IVL1 2488 aa15.67■□□□□ 0.1
SH2D3A-201ENST00000245908 A0A0J9YXY3 114 aa15.66■□□□□ 0.1
SH2D3A-201ENST00000245908 B5MCH6 92 aa15.66■□□□□ 0.1
SH2D3A-201ENST00000245908 SCGB1C2P0DMR2 95 aa15.66■□□□□ 0.1
SH2D3A-201ENST00000245908 SLC25A20O43772 301 aa15.66■□□□□ 0.1
SH2D3A-201ENST00000245908 TINCRA0A1B0GVN0 87 aa15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 EIF4EBP3O60516 100 aaPredicted RBP15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 ODF3L2Q3SX64 289 aa15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 RNASE13Q5GAN3 156 aaKnown RBP15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 MUSTN1Q8IVN3 82 aa15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 TRAV25A0A0B4J276 109 aa15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 A0A0B4J2C4 111 aa15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 GAGE2BQ13066 116 aa15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 GAGE2EQ4V326 116 aa15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 TMEM263Q8WUH6 116 aaKnown RBP15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 GAGE2DQ9UEU5 116 aa15.65■□□□□ 0.1
SH2D3A-201ENST00000245908 IGHV1-58A0A0C4DH39 117 aa15.64■□□□□ 0.09
SH2D3A-201ENST00000245908 NDUFV3P56181 108 aaKnown RBP15.64■□□□□ 0.09
SH2D3A-201ENST00000245908 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.64■□□□□ 0.09
SH2D3A-201ENST00000245908 IGKV2-29A2NJV5 120 aaPredicted RBP15.64■□□□□ 0.09
SH2D3A-201ENST00000245908 SNCGO76070 127 aa15.63■□□□□ 0.09
SH2D3A-201ENST00000245908 Q6Q795 121 aa15.63■□□□□ 0.09
SH2D3A-201ENST00000245908 ABCA12Q86UK0 2595 aa15.63■□□□□ 0.09
SH2D3A-201ENST00000245908 TRAV8-3A0A0A6YYJ7 113 aa15.63■□□□□ 0.09
SH2D3A-201ENST00000245908 IGHV3-33P01772 117 aa15.63■□□□□ 0.09
SH2D3A-201ENST00000245908 DNAJC9-AS1A6NH13 148 aa15.62■□□□□ 0.09
SH2D3A-201ENST00000245908 LITAFQ99732 161 aa15.62■□□□□ 0.09
SH2D3A-201ENST00000245908 XCL2Q9UBD3 114 aa15.62■□□□□ 0.09
SH2D3A-201ENST00000245908 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 IGHV3-38A0A0C4DH36 116 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms