RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 TCTEX1D4Q5JR98 221 aa8.81□□□□□ -1
SEC61A1-201ENST00000243253 TRAV2A0A0B4J234 112 aa8.81□□□□□ -1
SEC61A1-201ENST00000243253 SDHAF1A6NFY7 115 aa8.81□□□□□ -1
SEC61A1-201ENST00000243253 VCYO14598 125 aa8.81□□□□□ -1
SEC61A1-201ENST00000243253 PSMB8P28062 276 aa8.81□□□□□ -1
SEC61A1-201ENST00000243253 PAPPA-AS1Q5QFB9 102 aa8.81□□□□□ -1
SEC61A1-201ENST00000243253 PTH2Q96A98 100 aa8.81□□□□□ -1
SEC61A1-201ENST00000243253 LITAFQ99732 161 aa8.81□□□□□ -1
SEC61A1-201ENST00000243253 B4DSR2 109 aa8.8□□□□□ -1
SEC61A1-201ENST00000243253 EDA2RQ9HAV5 297 aa8.8□□□□□ -1
SEC61A1-201ENST00000243253 M0QXV9 152 aa8.8□□□□□ -1
SEC61A1-201ENST00000243253 C10orf126Q8N4M7 172 aa8.8□□□□□ -1
SEC61A1-201ENST00000243253 TMEM263Q8WUH6 116 aaKnown RBP8.8□□□□□ -1
SEC61A1-201ENST00000243253 ZNF625Q96I27 306 aaPredicted RBP8.8□□□□□ -1
SEC61A1-201ENST00000243253 XCL2Q9UBD3 114 aa8.8□□□□□ -1
SEC61A1-201ENST00000243253 A6NJY4 79 aa8.8□□□□□ -1
SEC61A1-201ENST00000243253 ID1P41134 155 aa8.8□□□□□ -1
SEC61A1-201ENST00000243253 KIR2DL4Q99706 377 aa8.8□□□□□ -1
SEC61A1-201ENST00000243253 SNRPD3P62318 126 aaKnown RBP8.79□□□□□ -1
SEC61A1-201ENST00000243253 Q8N1Y9 231 aa8.79□□□□□ -1
SEC61A1-201ENST00000243253 DYNLRB2Q8TF09 96 aa8.79□□□□□ -1
SEC61A1-201ENST00000243253 Q9UF83 564 aa8.79□□□□□ -1
SEC61A1-201ENST00000243253 XGP55808 180 aa8.79□□□□□ -1
SEC61A1-201ENST00000243253 A0A0J9YX75 114 aa8.78□□□□□ -1
SEC61A1-201ENST00000243253 ELANEP08246 267 aa8.78□□□□□ -1
SEC61A1-201ENST00000243253 SPXQ9BT56 116 aa8.78□□□□□ -1
SEC61A1-201ENST00000243253 J3QQQ9 107 aa8.78□□□□□ -1
SEC61A1-201ENST00000243253 RBMY1A1P0DJD3 496 aaKnown RBP8.78□□□□□ -1
SEC61A1-201ENST00000243253 RBMY1CP0DJD4 496 aa8.78□□□□□ -1
SEC61A1-201ENST00000243253 RBMY1FQ15415 496 aaKnown RBP8.78□□□□□ -1
SEC61A1-201ENST00000243253 TEN1Q86WV5 123 aa8.78□□□□□ -1
SEC61A1-201ENST00000243253 SYT8Q8NBV8 401 aa8.78□□□□□ -1
SEC61A1-201ENST00000243253 ZNF22P17026 224 aaPredicted RBP8.78□□□□□ -1
SEC61A1-201ENST00000243253 LGALS3P17931 250 aaKnown RBP8.78□□□□□ -1
SEC61A1-201ENST00000243253 HOXD3P31249 432 aaPredicted RBP8.78□□□□□ -1
SEC61A1-201ENST00000243253 HERVK_113P61574 105 aa8.78□□□□□ -1
SEC61A1-201ENST00000243253 A8MZ25 164 aa8.77□□□□□ -1.01
SEC61A1-201ENST00000243253 IGHV3-33P01772 117 aa8.77□□□□□ -1.01
SEC61A1-201ENST00000243253 RHOHQ15669 191 aa8.77□□□□□ -1.01
SEC61A1-201ENST00000243253 DGAT2L7PQ6IED9 249 aa8.77□□□□□ -1.01
SEC61A1-201ENST00000243253 LEPROTO15243 131 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 MT-ATP8P03928 68 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 CRYBA4P53673 196 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 C20orf203Q8NBC4 194 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 NBEAL1Q6ZS30 2694 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 IGLV4-3A0A075B6K6 122 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 K7EQG2 157 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 M0R2P5 195 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 CFAP161Q6P656 301 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 Q6ZUT4 128 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 LINC01587Q99440 93 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 RHODO00212 210 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 Q96MF0 132 aa8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 BBC3Q96PG8 261 aaPredicted RBP8.76□□□□□ -1.01
SEC61A1-201ENST00000243253 A0A1B0GV72 72 aa8.75□□□□□ -1.01
SEC61A1-201ENST00000243253 PRO1854Q9UHT4 67 aa8.75□□□□□ -1.01
SEC61A1-201ENST00000243253 A0A0B4J2C4 111 aa8.75□□□□□ -1.01
SEC61A1-201ENST00000243253 A8MTW9 85 aa8.75□□□□□ -1.01
SEC61A1-201ENST00000243253 DAND5Q8N907 189 aa8.75□□□□□ -1.01
SEC61A1-201ENST00000243253 A4D1N5 150 aa8.74□□□□□ -1.01
SEC61A1-201ENST00000243253 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
SEC61A1-201ENST00000243253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.74□□□□□ -1.01
SEC61A1-201ENST00000243253 IGKV2-29A2NJV5 120 aaPredicted RBP8.74□□□□□ -1.01
SEC61A1-201ENST00000243253 MRPS36P82909 103 aaKnown RBP8.74□□□□□ -1.01
SEC61A1-201ENST00000243253 ANKRD29Q8N6D5 301 aa8.74□□□□□ -1.01
SEC61A1-201ENST00000243253 PRORYQ9H606 182 aa8.73□□□□□ -1.01
SEC61A1-201ENST00000243253 PYGO1Q9Y3Y4 419 aa8.73□□□□□ -1.01
SEC61A1-201ENST00000243253 UNC79Q9P2D8 2635 aa8.73□□□□□ -1.01
SEC61A1-201ENST00000243253 A0A0J9YXV3 536 aa8.73□□□□□ -1.01
SEC61A1-201ENST00000243253 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
SEC61A1-201ENST00000243253 CITED1Q99966 193 aa8.73□□□□□ -1.01
SEC61A1-201ENST00000243253 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
SEC61A1-201ENST00000243253 MUSTN1Q8IVN3 82 aa8.72□□□□□ -1.01
SEC61A1-201ENST00000243253 IGHV1OR15-1A0A075B7D0 117 aa8.72□□□□□ -1.01
SEC61A1-201ENST00000243253 TRAV8-3A0A0A6YYJ7 113 aa8.72□□□□□ -1.01
SEC61A1-201ENST00000243253 A0A0J9YXY3 114 aa8.72□□□□□ -1.01
SEC61A1-201ENST00000243253 TMEM61Q8N0U2 210 aa8.72□□□□□ -1.01
SEC61A1-201ENST00000243253 WFDC10AQ9H1F0 79 aa8.72□□□□□ -1.01
SEC61A1-201ENST00000243253 VCX2Q9H322 139 aa8.72□□□□□ -1.01
SEC61A1-201ENST00000243253 A0A096LNT2 108 aa8.71□□□□□ -1.01
SEC61A1-201ENST00000243253 I3L3M4 83 aa8.71□□□□□ -1.01
SEC61A1-201ENST00000243253 CD28P10747 220 aa8.71□□□□□ -1.01
SEC61A1-201ENST00000243253 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.02
SEC61A1-201ENST00000243253 LINC01356Q8N9X3 169 aa8.71□□□□□ -1.02
SEC61A1-201ENST00000243253 NOTCH1P46531 2555 aa8.71□□□□□ -1.02
SEC61A1-201ENST00000243253 CKS1BP61024 79 aa8.71□□□□□ -1.02
SEC61A1-201ENST00000243253 TNFRSF18Q9Y5U5 241 aa8.7□□□□□ -1.02
SEC61A1-201ENST00000243253 TMEM89A2RUT3 159 aa8.7□□□□□ -1.02
SEC61A1-201ENST00000243253 C9JAW5 83 aa8.7□□□□□ -1.02
SEC61A1-201ENST00000243253 IGHV3-30-3P0DP02 117 aa8.7□□□□□ -1.02
SEC61A1-201ENST00000243253 Q6ZSN1 163 aa8.7□□□□□ -1.02
SEC61A1-201ENST00000243253 CHCHD7Q9BUK0 85 aa8.69□□□□□ -1.02
SEC61A1-201ENST00000243253 MAST4O15021 2626 aa8.69□□□□□ -1.02
SEC61A1-201ENST00000243253 TRGV1A0A0A0MS02 117 aa8.69□□□□□ -1.02
SEC61A1-201ENST00000243253 SPINK8P0C7L1 97 aa8.69□□□□□ -1.02
SEC61A1-201ENST00000243253 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
SEC61A1-201ENST00000243253 HIVEP1P15822 2718 aa8.69□□□□□ -1.02
SEC61A1-201ENST00000243253 VWFP04275 2813 aa8.69□□□□□ -1.02
SEC61A1-201ENST00000243253 TRBV30A0A0K0K1B3 111 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms