RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 IGF2-ASQ6U949 168 aa10.53□□□□□ -0.72
PCDHB3-201ENST00000231130 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
PCDHB3-201ENST00000231130 A0A0J9YXY3 114 aa10.53□□□□□ -0.72
PCDHB3-201ENST00000231130 A0A1W2PPR1 153 aa10.53□□□□□ -0.72
PCDHB3-201ENST00000231130 WNK1Q9H4A3 2382 aa10.53□□□□□ -0.72
PCDHB3-201ENST00000231130 LEPROTO15243 131 aa10.52□□□□□ -0.72
PCDHB3-201ENST00000231130 C5orf56Q8N8D9 126 aa10.52□□□□□ -0.72
PCDHB3-201ENST00000231130 PPP1R17O96001 155 aa10.52□□□□□ -0.73
PCDHB3-201ENST00000231130 U3KQE9 123 aa10.52□□□□□ -0.73
PCDHB3-201ENST00000231130 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 COX7CP15954 63 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 POLR2KP53803 58 aaKnown RBP10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 BLCAPP62952 87 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 RNF152Q8N8N0 203 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 LINC00315P59091 139 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 LINC00643Q86TS7 51 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 IGKV3D-7A0A0C4DH55 119 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 ZNF625Q96I27 306 aaPredicted RBP10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 AMELXQ99217 191 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 TIMM21Q9BVV7 248 aa10.51□□□□□ -0.73
PCDHB3-201ENST00000231130 A0A1B0GX51 115 aa10.5□□□□□ -0.73
PCDHB3-201ENST00000231130 KNCNA6PVL3 124 aa10.5□□□□□ -0.73
PCDHB3-201ENST00000231130 SPINK13Q1W4C9 94 aa10.5□□□□□ -0.73
PCDHB3-201ENST00000231130 PTPN13Q12923 2485 aa10.5□□□□□ -0.73
PCDHB3-201ENST00000231130 POLQO75417 2590 aa10.5□□□□□ -0.73
PCDHB3-201ENST00000231130 PRM2P04554 102 aa10.5□□□□□ -0.73
PCDHB3-201ENST00000231130 LENEPQ9Y5L5 61 aa10.5□□□□□ -0.73
PCDHB3-201ENST00000231130 USP9XQ93008 2570 aaPredicted RBP10.5□□□□□ -0.73
PCDHB3-201ENST00000231130 SMCR5Q8TEV8 140 aa10.49□□□□□ -0.73
PCDHB3-201ENST00000231130 NDUFA12Q9UI09 145 aa10.49□□□□□ -0.73
PCDHB3-201ENST00000231130 TLN2Q9Y4G6 2542 aa10.49□□□□□ -0.73
PCDHB3-201ENST00000231130 FAM240AA0A1B0GVK7 77 aa10.49□□□□□ -0.73
PCDHB3-201ENST00000231130 SDIM1Q6ZPB5 146 aa10.49□□□□□ -0.73
PCDHB3-201ENST00000231130 IGHV1-69DA0A0B4J2H0 117 aa10.49□□□□□ -0.73
PCDHB3-201ENST00000231130 ADAMTSL4-AS1Q5T5F5 129 aa10.49□□□□□ -0.73
PCDHB3-201ENST00000231130 KIF25-AS1Q9Y6Z4 181 aa10.49□□□□□ -0.73
PCDHB3-201ENST00000231130 LST1O00453 97 aa10.48□□□□□ -0.73
PCDHB3-201ENST00000231130 IGHV3-30-3P0DP02 117 aa10.48□□□□□ -0.73
PCDHB3-201ENST00000231130 MOB4Q9Y3A3 225 aa10.48□□□□□ -0.73
PCDHB3-201ENST00000231130 CD28P10747 220 aa10.47□□□□□ -0.73
PCDHB3-201ENST00000231130 PROK1P58294 105 aa10.47□□□□□ -0.73
PCDHB3-201ENST00000231130 ADORA2A-AS1P86434 159 aa10.47□□□□□ -0.73
PCDHB3-201ENST00000231130 IMUPQ9GZP8 106 aa10.47□□□□□ -0.73
PCDHB3-201ENST00000231130 TIMM17AQ99595 171 aa10.47□□□□□ -0.73
PCDHB3-201ENST00000231130 H3BUX3 64 aa10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 DAZ2Q13117 558 aaKnown RBP10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 DAZ4Q86SG3 579 aaKnown RBP10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 DAZ1Q9NQZ3 744 aaKnown RBP10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 DAZ3Q9NR90 486 aaKnown RBP10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 PEMTQ9UBM1 199 aa10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 CELSR2Q9HCU4 2923 aa10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 NDUFA4O00483 81 aa10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 SOCS3O14543 225 aa10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 C11orf71Q6IPW1 123 aa10.46□□□□□ -0.73
PCDHB3-201ENST00000231130 NXPH4O95158 308 aa10.46□□□□□ -0.74
PCDHB3-201ENST00000231130 ACYP1P07311 99 aa10.46□□□□□ -0.74
PCDHB3-201ENST00000231130 BAALC-AS2P0C853 105 aa10.46□□□□□ -0.74
PCDHB3-201ENST00000231130 CYSTM1Q9H1C7 97 aa10.45□□□□□ -0.74
PCDHB3-201ENST00000231130 C10orf105Q8TEF2 133 aa10.45□□□□□ -0.74
PCDHB3-201ENST00000231130 ABCA2Q9BZC7 2435 aa10.45□□□□□ -0.74
PCDHB3-201ENST00000231130 IGHV4OR15-8A0A075B7B6 117 aa10.45□□□□□ -0.74
PCDHB3-201ENST00000231130 A0A087WW49 117 aa10.45□□□□□ -0.74
PCDHB3-201ENST00000231130 FAM223BA6NKX1 122 aa10.45□□□□□ -0.74
PCDHB3-201ENST00000231130 HOXD3P31249 432 aaPredicted RBP10.45□□□□□ -0.74
PCDHB3-201ENST00000231130 FAM223AQ8IWN6 122 aa10.45□□□□□ -0.74
PCDHB3-201ENST00000231130 IGHV3-38A0A0C4DH36 116 aa10.44□□□□□ -0.74
PCDHB3-201ENST00000231130 LY6DQ14210 128 aa10.44□□□□□ -0.74
PCDHB3-201ENST00000231130 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
PCDHB3-201ENST00000231130 Q9UF83 564 aa10.44□□□□□ -0.74
PCDHB3-201ENST00000231130 C10orf99Q6UWK7 81 aa10.44□□□□□ -0.74
PCDHB3-201ENST00000231130 M0QY20 66 aa10.43□□□□□ -0.74
PCDHB3-201ENST00000231130 ATOX1O00244 68 aa10.43□□□□□ -0.74
PCDHB3-201ENST00000231130 IGHV4-38-2P0DP08 117 aa10.43□□□□□ -0.74
PCDHB3-201ENST00000231130 A0A087WVE0 104 aa10.43□□□□□ -0.74
PCDHB3-201ENST00000231130 TRBV27A0A0K0K1C4 114 aa10.43□□□□□ -0.74
PCDHB3-201ENST00000231130 LMO4P61968 165 aa10.43□□□□□ -0.74
PCDHB3-201ENST00000231130 HIST1H4AP62805 103 aaKnown RBP10.43□□□□□ -0.74
PCDHB3-201ENST00000231130 IGLV4-3A0A075B6K6 122 aa10.42□□□□□ -0.74
PCDHB3-201ENST00000231130 C20orf203Q8NBC4 194 aa10.42□□□□□ -0.74
PCDHB3-201ENST00000231130 DPH3Q96FX2 82 aa10.42□□□□□ -0.74
PCDHB3-201ENST00000231130 Q9HAA7 133 aa10.42□□□□□ -0.74
PCDHB3-201ENST00000231130 ZANQ9Y493 2812 aa10.42□□□□□ -0.74
PCDHB3-201ENST00000231130 FAM208BQ5VWN6 2430 aa10.41□□□□□ -0.74
PCDHB3-201ENST00000231130 DNAL4O96015 105 aa10.41□□□□□ -0.74
PCDHB3-201ENST00000231130 JMJD1CQ15652 2540 aa10.41□□□□□ -0.74
PCDHB3-201ENST00000231130 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.41□□□□□ -0.74
PCDHB3-201ENST00000231130 IGKV2-29A2NJV5 120 aaPredicted RBP10.41□□□□□ -0.74
PCDHB3-201ENST00000231130 TMEM61Q8N0U2 210 aa10.41□□□□□ -0.74
PCDHB3-201ENST00000231130 TIRAPP58753 221 aa10.4□□□□□ -0.74
PCDHB3-201ENST00000231130 CACNA1AO00555 2505 aa10.4□□□□□ -0.74
PCDHB3-201ENST00000231130 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.74
PCDHB3-201ENST00000231130 KLLNB2CW77 178 aa10.4□□□□□ -0.74
PCDHB3-201ENST00000231130 MED14OSP0DP75 135 aa10.4□□□□□ -0.74
PCDHB3-201ENST00000231130 SYNJ2BPP57105 145 aa10.4□□□□□ -0.74
PCDHB3-201ENST00000231130 PKIGQ9Y2B9 76 aa10.4□□□□□ -0.74
PCDHB3-201ENST00000231130 ACACBO00763 2458 aa10.39□□□□□ -0.75
PCDHB3-201ENST00000231130 SONP18583 2426 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms