RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 LYPD6BQ8NI32 183 aa9.37□□□□□ -0.91
RHOXF1-201ENST00000217999 SMIM7Q9BQ49 75 aa9.37□□□□□ -0.91
RHOXF1-201ENST00000217999 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
RHOXF1-201ENST00000217999 CHAC1Q9BUX1 264 aa9.36□□□□□ -0.91
RHOXF1-201ENST00000217999 NCR2O95944 276 aa9.35□□□□□ -0.91
RHOXF1-201ENST00000217999 DGAT2L7PQ6IED9 249 aa9.35□□□□□ -0.91
RHOXF1-201ENST00000217999 CLRN3Q8NCR9 226 aa9.35□□□□□ -0.91
RHOXF1-201ENST00000217999 SRRM2Q9UQ35 2752 aaKnown RBP9.35□□□□□ -0.91
RHOXF1-201ENST00000217999 IGLV10-54A0A075B6I4 117 aa9.34□□□□□ -0.91
RHOXF1-201ENST00000217999 TRAV26-2A0A0B4J265 109 aa9.34□□□□□ -0.91
RHOXF1-201ENST00000217999 APCSP02743 223 aa9.34□□□□□ -0.91
RHOXF1-201ENST00000217999 AMMECR1LQ6DCA0 310 aa9.34□□□□□ -0.91
RHOXF1-201ENST00000217999 GATD1Q8NB37 220 aa9.34□□□□□ -0.91
RHOXF1-201ENST00000217999 C20orf203Q8NBC4 194 aa9.34□□□□□ -0.91
RHOXF1-201ENST00000217999 GTSF1Q8WW33 167 aa9.34□□□□□ -0.91
RHOXF1-201ENST00000217999 VPS13BQ7Z7G8 4022 aa9.33□□□□□ -0.92
RHOXF1-201ENST00000217999 ZNF727A8MUV8 499 aa9.33□□□□□ -0.92
RHOXF1-201ENST00000217999 FAM210AQ96ND0 272 aa9.33□□□□□ -0.92
RHOXF1-201ENST00000217999 AP5S1Q9NUS5 200 aa9.33□□□□□ -0.92
RHOXF1-201ENST00000217999 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
RHOXF1-201ENST00000217999 IGLV4-60A0A075B6I1 120 aa9.32□□□□□ -0.92
RHOXF1-201ENST00000217999 hDV102S1A0JD36 115 aa9.32□□□□□ -0.92
RHOXF1-201ENST00000217999 H7C423 109 aa9.32□□□□□ -0.92
RHOXF1-201ENST00000217999 PRSS1P07477 247 aa9.32□□□□□ -0.92
RHOXF1-201ENST00000217999 GFRA4Q9GZZ7 299 aa9.32□□□□□ -0.92
RHOXF1-201ENST00000217999 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.31□□□□□ -0.92
RHOXF1-201ENST00000217999 A0A1B0GUT8 65 aa9.31□□□□□ -0.92
RHOXF1-201ENST00000217999 FAM231BA6NCW3 169 aa9.31□□□□□ -0.92
RHOXF1-201ENST00000217999 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
RHOXF1-201ENST00000217999 LINC01551Q86U37 167 aa9.31□□□□□ -0.92
RHOXF1-201ENST00000217999 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
RHOXF1-201ENST00000217999 DEFB104AQ8WTQ1 72 aa9.31□□□□□ -0.92
RHOXF1-201ENST00000217999 TSKUQ8WUA8 353 aa9.31□□□□□ -0.92
RHOXF1-201ENST00000217999 RPL39LQ96EH5 51 aaKnown RBP9.31□□□□□ -0.92
RHOXF1-201ENST00000217999 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
RHOXF1-201ENST00000217999 FOXA3P55318 350 aaPredicted RBP9.3□□□□□ -0.92
RHOXF1-201ENST00000217999 RNASEKQ6P5S7 137 aaKnown RBP9.3□□□□□ -0.92
RHOXF1-201ENST00000217999 KRTAP26-1Q6PEX3 210 aa9.3□□□□□ -0.92
RHOXF1-201ENST00000217999 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
RHOXF1-201ENST00000217999 I3L3M4 83 aa9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 J3QL48 77 aa9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 ZNF25P17030 456 aaPredicted RBP9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 PMCHP20382 165 aa9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 FAM74A3Q4VXF1 159 aa9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 CFAP161Q6P656 301 aa9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 TMEM101Q96IK0 257 aa9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 BTF3L4Q96K17 158 aa9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 OSTCQ9NRP0 149 aa9.29□□□□□ -0.92
RHOXF1-201ENST00000217999 FAT1Q14517 4588 aa9.28□□□□□ -0.92
RHOXF1-201ENST00000217999 IGKV3OR2-268A0A0C4DH90 116 aa9.28□□□□□ -0.92
RHOXF1-201ENST00000217999 TRBV6-5A0A0K0K1A5 114 aa9.28□□□□□ -0.92
RHOXF1-201ENST00000217999 MRAP2Q96G30 205 aa9.28□□□□□ -0.92
RHOXF1-201ENST00000217999 TMEM191AQ9H0A3 160 aa9.28□□□□□ -0.92
RHOXF1-201ENST00000217999 ST20Q9HBF5 79 aa9.28□□□□□ -0.92
RHOXF1-201ENST00000217999 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.93
RHOXF1-201ENST00000217999 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
RHOXF1-201ENST00000217999 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
RHOXF1-201ENST00000217999 SRP19P09132 144 aaKnown RBP9.27□□□□□ -0.93
RHOXF1-201ENST00000217999 RIGQ13278 110 aa9.27□□□□□ -0.93
RHOXF1-201ENST00000217999 GAGE12HA6NDE8 117 aa9.26□□□□□ -0.93
RHOXF1-201ENST00000217999 PPP1R17O96001 155 aa9.26□□□□□ -0.93
RHOXF1-201ENST00000217999 FGF6P10767 208 aa9.26□□□□□ -0.93
RHOXF1-201ENST00000217999 SMAGPQ0VAQ4 97 aa9.25□□□□□ -0.93
RHOXF1-201ENST00000217999 ADIRFQ15847 76 aa9.25□□□□□ -0.93
RHOXF1-201ENST00000217999 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
RHOXF1-201ENST00000217999 OR5A1Q8NGJ0 315 aa9.25□□□□□ -0.93
RHOXF1-201ENST00000217999 NAT8BQ9UHF3 227 aa9.25□□□□□ -0.93
RHOXF1-201ENST00000217999 RPL37AP61513 92 aaKnown RBP9.24□□□□□ -0.93
RHOXF1-201ENST00000217999 PEA15Q15121 130 aa9.24□□□□□ -0.93
RHOXF1-201ENST00000217999 CHCHD10Q8WYQ3 142 aaPredicted RBP9.24□□□□□ -0.93
RHOXF1-201ENST00000217999 ISOC2Q96AB3 205 aa9.24□□□□□ -0.93
RHOXF1-201ENST00000217999 TMEM242Q9NWH2 141 aa9.24□□□□□ -0.93
RHOXF1-201ENST00000217999 NAT8Q9UHE5 227 aa9.24□□□□□ -0.93
RHOXF1-201ENST00000217999 V9GYV3 84 aa9.24□□□□□ -0.93
RHOXF1-201ENST00000217999 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
RHOXF1-201ENST00000217999 C7orf77A4D0Y5 90 aa9.23□□□□□ -0.93
RHOXF1-201ENST00000217999 FCER1GP30273 86 aa9.23□□□□□ -0.93
RHOXF1-201ENST00000217999 AMN1Q8IY45 258 aa9.23□□□□□ -0.93
RHOXF1-201ENST00000217999 PKIGQ9Y2B9 76 aa9.23□□□□□ -0.93
RHOXF1-201ENST00000217999 DNAH8Q96JB1 4490 aa9.22□□□□□ -0.93
RHOXF1-201ENST00000217999 TSHBP01222 138 aa9.22□□□□□ -0.93
RHOXF1-201ENST00000217999 RAB4AP20338 218 aa9.22□□□□□ -0.93
RHOXF1-201ENST00000217999 SDIM1Q6ZPB5 146 aa9.22□□□□□ -0.93
RHOXF1-201ENST00000217999 RNF185Q96GF1 192 aa9.22□□□□□ -0.93
RHOXF1-201ENST00000217999 KIR2DL4Q99706 377 aa9.22□□□□□ -0.93
RHOXF1-201ENST00000217999 SMDT1Q9H4I9 107 aa9.22□□□□□ -0.93
RHOXF1-201ENST00000217999 TRBV27A0A0K0K1C4 114 aa9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 A0A1B0GVG6 124 aa9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 A0A1B0GW15 77 aa9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 KRTAP29-1A8MX34 341 aaPredicted RBP9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 PPP1R2P9O14990 202 aa9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 RPL23P62829 140 aaKnown RBP9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 SS18Q15532 418 aa9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 MRPL52Q86TS9 123 aaKnown RBP9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 C15orf56Q8N910 161 aa9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 NUP35Q8NFH5 326 aa9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 DPH3Q96FX2 82 aa9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.21□□□□□ -0.94
RHOXF1-201ENST00000217999 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms