RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
CHGA-201ENST00000216492 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
CHGA-201ENST00000216492 ZNF815PA8K554 130 aa12.38□□□□□ -0.43
CHGA-201ENST00000216492 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
CHGA-201ENST00000216492 BEAN1Q3B7T3 259 aa12.38□□□□□ -0.43
CHGA-201ENST00000216492 STHQ8IWL8 128 aa12.38□□□□□ -0.43
CHGA-201ENST00000216492 IGLV4-69A0A075B6H9 119 aa12.37□□□□□ -0.43
CHGA-201ENST00000216492 RPL39P62891 51 aaKnown RBP12.37□□□□□ -0.43
CHGA-201ENST00000216492 C12orf74Q32Q52 190 aa12.37□□□□□ -0.43
CHGA-201ENST00000216492 C11orf86A6NJI1 115 aa12.36□□□□□ -0.43
CHGA-201ENST00000216492 INSL3P51460 131 aa12.36□□□□□ -0.43
CHGA-201ENST00000216492 SCGB1D4Q6XE38 83 aa12.36□□□□□ -0.43
CHGA-201ENST00000216492 PRIMA1Q86XR5 153 aa12.36□□□□□ -0.43
CHGA-201ENST00000216492 SPATA3Q8NHX4 192 aa12.36□□□□□ -0.43
CHGA-201ENST00000216492 SCGB1A1P11684 91 aa12.36□□□□□ -0.43
CHGA-201ENST00000216492 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
CHGA-201ENST00000216492 FAM110AQ9BQ89 295 aa12.36□□□□□ -0.43
CHGA-201ENST00000216492 IGLL5B9A064 214 aa12.35□□□□□ -0.43
CHGA-201ENST00000216492 C9orf66Q5T8R8 295 aa12.35□□□□□ -0.43
CHGA-201ENST00000216492 MORN3Q6PF18 240 aaPredicted RBP12.35□□□□□ -0.43
CHGA-201ENST00000216492 A6NJY4 79 aa12.34□□□□□ -0.43
CHGA-201ENST00000216492 I3L3M4 83 aa12.34□□□□□ -0.43
CHGA-201ENST00000216492 ZNF479Q96JC4 524 aa12.34□□□□□ -0.43
CHGA-201ENST00000216492 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
CHGA-201ENST00000216492 C19orf73Q9NVV2 129 aa12.34□□□□□ -0.43
CHGA-201ENST00000216492 A0A1B0GWB2 263 aa12.33□□□□□ -0.44
CHGA-201ENST00000216492 RBMY1A1P0DJD3 496 aaKnown RBP12.33□□□□□ -0.44
CHGA-201ENST00000216492 RBMY1CP0DJD4 496 aa12.33□□□□□ -0.44
CHGA-201ENST00000216492 RBMY1FQ15415 496 aaKnown RBP12.33□□□□□ -0.44
CHGA-201ENST00000216492 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
CHGA-201ENST00000216492 EMP1P54849 157 aa12.32□□□□□ -0.44
CHGA-201ENST00000216492 TMEM170BQ5T4T1 132 aa12.32□□□□□ -0.44
CHGA-201ENST00000216492 WFDC9Q8NEX5 89 aa12.32□□□□□ -0.44
CHGA-201ENST00000216492 EDA2RQ9HAV5 297 aa12.32□□□□□ -0.44
CHGA-201ENST00000216492 SRSF9Q13242 221 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHGA-201ENST00000216492 C3orf56Q8N813 242 aa12.31□□□□□ -0.44
CHGA-201ENST00000216492 WFDC10AQ9H1F0 79 aa12.31□□□□□ -0.44
CHGA-201ENST00000216492 MAST4O15021 2626 aa12.31□□□□□ -0.44
CHGA-201ENST00000216492 HTN1P15515 57 aa12.31□□□□□ -0.44
CHGA-201ENST00000216492 RRN3P1Q2M238 152 aa12.31□□□□□ -0.44
CHGA-201ENST00000216492 C20orf203Q8NBC4 194 aa12.31□□□□□ -0.44
CHGA-201ENST00000216492 FBN1P35555 2871 aaKnown RBP12.3□□□□□ -0.44
CHGA-201ENST00000216492 PIK3CD-AS1Q5SR53 167 aa12.3□□□□□ -0.44
CHGA-201ENST00000216492 XCL2Q9UBD3 114 aa12.3□□□□□ -0.44
CHGA-201ENST00000216492 VWFP04275 2813 aa12.3□□□□□ -0.44
CHGA-201ENST00000216492 A8MWV9 139 aa12.3□□□□□ -0.44
CHGA-201ENST00000216492 ZNF415Q09FC8 603 aa12.3□□□□□ -0.44
CHGA-201ENST00000216492 NFE4Q86UQ8 179 aa12.3□□□□□ -0.44
CHGA-201ENST00000216492 M0R2P5 195 aa12.29□□□□□ -0.44
CHGA-201ENST00000216492 ZNRF2Q8NHG8 242 aa12.29□□□□□ -0.44
CHGA-201ENST00000216492 PLEKHB2Q96CS7 222 aa12.29□□□□□ -0.44
CHGA-201ENST00000216492 INSP01308 110 aa12.28□□□□□ -0.44
CHGA-201ENST00000216492 P0DMU3 169 aa12.28□□□□□ -0.44
CHGA-201ENST00000216492 FAM231AP0DMU4 169 aa12.28□□□□□ -0.44
CHGA-201ENST00000216492 FAM231CP0DMU5 169 aa12.28□□□□□ -0.44
CHGA-201ENST00000216492 LINC01587Q99440 93 aa12.28□□□□□ -0.44
CHGA-201ENST00000216492 TRRAPQ9Y4A5 3859 aa12.28□□□□□ -0.44
CHGA-201ENST00000216492 LGALS3P17931 250 aaKnown RBP12.27□□□□□ -0.45
CHGA-201ENST00000216492 PTH2Q96A98 100 aa12.27□□□□□ -0.45
CHGA-201ENST00000216492 A0A0J9YY99 117 aa12.26□□□□□ -0.45
CHGA-201ENST00000216492 F8W1H4 67 aa12.26□□□□□ -0.45
CHGA-201ENST00000216492 PRM2P04554 102 aa12.26□□□□□ -0.45
CHGA-201ENST00000216492 SHISA2Q6UWI4 295 aa12.26□□□□□ -0.45
CHGA-201ENST00000216492 VCX2Q9H322 139 aa12.26□□□□□ -0.45
CHGA-201ENST00000216492 SPANXB1Q9NS25 103 aaPredicted RBP12.26□□□□□ -0.45
CHGA-201ENST00000216492 TNFRSF18Q9Y5U5 241 aa12.26□□□□□ -0.45
CHGA-201ENST00000216492 J3QQQ9 107 aa12.26□□□□□ -0.45
CHGA-201ENST00000216492 RPL35AP18077 110 aaKnown RBP12.26□□□□□ -0.45
CHGA-201ENST00000216492 LINC00467Q9BRT7 94 aa12.25□□□□□ -0.45
CHGA-201ENST00000216492 MRPL16Q9NX20 251 aaKnown RBP12.25□□□□□ -0.45
CHGA-201ENST00000216492 IGHV3-73A0A0B4J1V6 119 aa12.25□□□□□ -0.45
CHGA-201ENST00000216492 OPRPNQ99935 248 aaPredicted RBP12.25□□□□□ -0.45
CHGA-201ENST00000216492 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
CHGA-201ENST00000216492 IGLV4-3A0A075B6K6 122 aa12.24□□□□□ -0.45
CHGA-201ENST00000216492 A0A1B0GV72 72 aa12.24□□□□□ -0.45
CHGA-201ENST00000216492 RHODO00212 210 aa12.24□□□□□ -0.45
CHGA-201ENST00000216492 LEPROTO15243 131 aa12.24□□□□□ -0.45
CHGA-201ENST00000216492 UBE2D1P51668 147 aa12.24□□□□□ -0.45
CHGA-201ENST00000216492 C1orf158Q8N1D5 194 aa12.24□□□□□ -0.45
CHGA-201ENST00000216492 PGPEP1Q9NXJ5 209 aa12.24□□□□□ -0.45
CHGA-201ENST00000216492 TMEM223A0PJW6 202 aa12.23□□□□□ -0.45
CHGA-201ENST00000216492 GIG44P09565 113 aaPredicted RBP12.23□□□□□ -0.45
CHGA-201ENST00000216492 TSPEAR-AS2P59090 65 aa12.23□□□□□ -0.45
CHGA-201ENST00000216492 IGHV3OR16-12A0A075B7B8 117 aa12.23□□□□□ -0.45
CHGA-201ENST00000216492 CRYBA4P53673 196 aa12.23□□□□□ -0.45
CHGA-201ENST00000216492 RPL24P83731 157 aaKnown RBP12.23□□□□□ -0.45
CHGA-201ENST00000216492 SLC25A29Q8N8R3 303 aa12.23□□□□□ -0.45
CHGA-201ENST00000216492 SPXQ9BT56 116 aa12.23□□□□□ -0.45
CHGA-201ENST00000216492 H3BMG7 143 aa12.22□□□□□ -0.45
CHGA-201ENST00000216492 ZNF22P17026 224 aaPredicted RBP12.22□□□□□ -0.45
CHGA-201ENST00000216492 C1QTNF4Q9BXJ3 329 aa12.22□□□□□ -0.45
CHGA-201ENST00000216492 WIPF1O43516 503 aa12.21□□□□□ -0.45
CHGA-201ENST00000216492 LYRM7Q5U5X0 104 aa12.21□□□□□ -0.45
CHGA-201ENST00000216492 CFAP126Q5VTH2 177 aa12.21□□□□□ -0.45
CHGA-201ENST00000216492 SIGMAR1Q99720 223 aa12.21□□□□□ -0.45
CHGA-201ENST00000216492 GAGE13Q4V321 117 aa12.2□□□□□ -0.46
CHGA-201ENST00000216492 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
CHGA-201ENST00000216492 AMELXQ99217 191 aa12.2□□□□□ -0.46
CHGA-201ENST00000216492 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
CHGA-201ENST00000216492 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms