RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
PHGDH-233ENST00000642021 AMELXQ99217 191 aa10.25□□□□□ -0.77
PHGDH-233ENST00000642021 LOC107984156A0A0G2JMH3 177 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 A0A0J9YX75 114 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 TRBV6-5A0A0K0K1A5 114 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 IGHV4-59P01825 116 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 P0DMU3 169 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 FAM231AP0DMU4 169 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 FAM231CP0DMU5 169 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 SPINK13Q1W4C9 94 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 ARL17AQ8IVW1 177 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 PRORYQ9H606 182 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 USP9YO00507 2555 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-233ENST00000642021 PKD1L2Q7Z442 2459 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 ZNF56Q15929 161 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 PAPPA-AS1Q5QFB9 102 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 NDUFA11Q86Y39 141 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 PPDPFQ9H3Y8 114 aa10.24□□□□□ -0.77
PHGDH-233ENST00000642021 USP9XQ93008 2570 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-233ENST00000642021 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
PHGDH-233ENST00000642021 HERVK_113P61574 105 aa10.23□□□□□ -0.77
PHGDH-233ENST00000642021 CFAP126Q5VTH2 177 aa10.23□□□□□ -0.77
PHGDH-233ENST00000642021 IGHV3-30P01768 117 aa10.23□□□□□ -0.77
PHGDH-233ENST00000642021 IGHV3-30-5P0DP03 117 aa10.23□□□□□ -0.77
PHGDH-233ENST00000642021 PSMB2P49721 201 aa10.23□□□□□ -0.77
PHGDH-233ENST00000642021 NRGNQ92686 78 aa10.23□□□□□ -0.77
PHGDH-233ENST00000642021 DUX5Q96PT3 197 aa10.23□□□□□ -0.77
PHGDH-233ENST00000642021 C1QTNF4Q9BXJ3 329 aa10.23□□□□□ -0.77
PHGDH-233ENST00000642021 CFC1BP0CG36 223 aa10.22□□□□□ -0.77
PHGDH-233ENST00000642021 CFC1P0CG37 223 aa10.22□□□□□ -0.77
PHGDH-233ENST00000642021 SLC25A29Q8N8R3 303 aa10.22□□□□□ -0.77
PHGDH-233ENST00000642021 UBE2D3P61077 147 aa10.22□□□□□ -0.77
PHGDH-233ENST00000642021 UBE2D2P62837 147 aa10.22□□□□□ -0.77
PHGDH-233ENST00000642021 DEFB112Q30KQ8 113 aa10.22□□□□□ -0.77
PHGDH-233ENST00000642021 DLX4Q92988 240 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-233ENST00000642021 K7EQG2 157 aa10.21□□□□□ -0.77
PHGDH-233ENST00000642021 NFE4Q86UQ8 179 aa10.21□□□□□ -0.77
PHGDH-233ENST00000642021 PTH2Q96A98 100 aa10.21□□□□□ -0.77
PHGDH-233ENST00000642021 IGHV1OR15-1A0A075B7D0 117 aa10.21□□□□□ -0.78
PHGDH-233ENST00000642021 J3QQQ9 107 aa10.21□□□□□ -0.78
PHGDH-233ENST00000642021 SYNJ2BPP57105 145 aa10.21□□□□□ -0.78
PHGDH-233ENST00000642021 CITED2Q99967 270 aaPredicted RBP10.21□□□□□ -0.78
PHGDH-233ENST00000642021 ZNF580Q9UK33 172 aa10.21□□□□□ -0.78
PHGDH-233ENST00000642021 IGHV3-64A0A075B6Q5 118 aa10.2□□□□□ -0.78
PHGDH-233ENST00000642021 SNRPD3P62318 126 aaKnown RBP10.2□□□□□ -0.78
PHGDH-233ENST00000642021 FOXI1Q12951 378 aa10.2□□□□□ -0.78
PHGDH-233ENST00000642021 MXRA5Q9NR99 2828 aa10.19□□□□□ -0.78
PHGDH-233ENST00000642021 B4DSR2 109 aa10.19□□□□□ -0.78
PHGDH-233ENST00000642021 ODF3Q96PU9 254 aa10.19□□□□□ -0.78
PHGDH-233ENST00000642021 POLQO75417 2590 aa10.19□□□□□ -0.78
PHGDH-233ENST00000642021 DOPEY1Q5JWR5 2465 aa10.19□□□□□ -0.78
PHGDH-233ENST00000642021 EIF4EBP3O60516 100 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-233ENST00000642021 TCL1BO95988 128 aa10.19□□□□□ -0.78
PHGDH-233ENST00000642021 PRM2P04554 102 aa10.19□□□□□ -0.78
PHGDH-233ENST00000642021 NSUN5P1Q3KNT7 163 aa10.19□□□□□ -0.78
PHGDH-233ENST00000642021 SYT8Q8NBV8 401 aa10.19□□□□□ -0.78
PHGDH-233ENST00000642021 RBMY1A1P0DJD3 496 aaKnown RBP10.18□□□□□ -0.78
PHGDH-233ENST00000642021 RBMY1CP0DJD4 496 aa10.18□□□□□ -0.78
PHGDH-233ENST00000642021 RBMY1FQ15415 496 aaKnown RBP10.18□□□□□ -0.78
PHGDH-233ENST00000642021 C20orf203Q8NBC4 194 aa10.18□□□□□ -0.78
PHGDH-233ENST00000642021 A0A0J9YXV3 536 aa10.18□□□□□ -0.78
PHGDH-233ENST00000642021 TMEM223A0PJW6 202 aa10.18□□□□□ -0.78
PHGDH-233ENST00000642021 PROK1P58294 105 aa10.18□□□□□ -0.78
PHGDH-233ENST00000642021 TRPT1Q86TN4 253 aaKnown RBP10.18□□□□□ -0.78
PHGDH-233ENST00000642021 CSDC2Q9Y534 153 aaKnown RBP10.18□□□□□ -0.78
PHGDH-233ENST00000642021 IGHV3-73A0A0B4J1V6 119 aa10.17□□□□□ -0.78
PHGDH-233ENST00000642021 HTN1P15515 57 aa10.17□□□□□ -0.78
PHGDH-233ENST00000642021 LGALS3P17931 250 aaKnown RBP10.17□□□□□ -0.78
PHGDH-233ENST00000642021 MAPK1IP1LQ8NDC0 245 aa10.17□□□□□ -0.78
PHGDH-233ENST00000642021 MT-ATP8P03928 68 aa10.17□□□□□ -0.78
PHGDH-233ENST00000642021 ZNF22P17026 224 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-233ENST00000642021 RHOHQ15669 191 aa10.17□□□□□ -0.78
PHGDH-233ENST00000642021 C10orf126Q8N4M7 172 aa10.17□□□□□ -0.78
PHGDH-233ENST00000642021 Q9UF83 564 aa10.17□□□□□ -0.78
PHGDH-233ENST00000642021 CUBNO60494 3623 aa10.17□□□□□ -0.78
PHGDH-233ENST00000642021 CENPEQ02224 2701 aa10.17□□□□□ -0.78
PHGDH-233ENST00000642021 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
PHGDH-233ENST00000642021 IGLV4-3A0A075B6K6 122 aa10.16□□□□□ -0.78
PHGDH-233ENST00000642021 I3L3M4 83 aa10.16□□□□□ -0.78
PHGDH-233ENST00000642021 FHL3Q13643 280 aa10.16□□□□□ -0.78
PHGDH-233ENST00000642021 CARD19Q96LW7 228 aa10.16□□□□□ -0.78
PHGDH-233ENST00000642021 RHODO00212 210 aa10.15□□□□□ -0.78
PHGDH-233ENST00000642021 FBN2P35556 2912 aa10.15□□□□□ -0.78
PHGDH-233ENST00000642021 LEPROTO15243 131 aa10.15□□□□□ -0.78
PHGDH-233ENST00000642021 CEMP1Q6PRD7 247 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-233ENST00000642021 CDIP1Q9H305 208 aa10.15□□□□□ -0.78
PHGDH-233ENST00000642021 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
PHGDH-233ENST00000642021 KNCNA6PVL3 124 aa10.14□□□□□ -0.79
PHGDH-233ENST00000642021 HOXD3P31249 432 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-233ENST00000642021 IGSF10Q6WRI0 2623 aa10.14□□□□□ -0.79
PHGDH-233ENST00000642021 TRAV2A0A0B4J234 112 aa10.14□□□□□ -0.79
PHGDH-233ENST00000642021 WIPF1O43516 503 aa10.14□□□□□ -0.79
PHGDH-233ENST00000642021 MUSTN1Q8IVN3 82 aa10.14□□□□□ -0.79
PHGDH-233ENST00000642021 ATP6V0E2Q8NHE4 81 aa10.14□□□□□ -0.79
PHGDH-233ENST00000642021 MYO18BQ8IUG5 2567 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 PIEZO1Q92508 2521 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 ADARB2-AS1A8MUL3 147 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 GAGE12JA6NER3 117 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 GAGE7O76087 117 aa10.13□□□□□ -0.79
PHGDH-233ENST00000642021 GAGE12FP0CL80 117 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms