RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 TRBV27A0A0K0K1C4 114 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 OR11H12B2RN74 326 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 F8VRH5 84 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 PROK1P58294 105 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 ZNF415Q09FC8 603 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 TRPT1Q86TN4 253 aaKnown RBP13.04□□□□□ -0.32
PHGDH-226ENST00000641756 M0R2P5 195 aa13.03□□□□□ -0.32
PHGDH-226ENST00000641756 DLEU1O43261 78 aa13.03□□□□□ -0.32
PHGDH-226ENST00000641756 PLNP26678 52 aa13.03□□□□□ -0.32
PHGDH-226ENST00000641756 HIVEP2P31629 2446 aa13.03□□□□□ -0.32
PHGDH-226ENST00000641756 ADARB2-AS1A8MUL3 147 aa13.02□□□□□ -0.33
PHGDH-226ENST00000641756 IGHV3OR16-12A0A075B7B8 117 aa13.01□□□□□ -0.33
PHGDH-226ENST00000641756 PRSS29PA6NIE9 313 aa13.01□□□□□ -0.33
PHGDH-226ENST00000641756 TSHBP01222 138 aa13.01□□□□□ -0.33
PHGDH-226ENST00000641756 P0DMU3 169 aa13.01□□□□□ -0.33
PHGDH-226ENST00000641756 FAM231AP0DMU4 169 aa13.01□□□□□ -0.33
PHGDH-226ENST00000641756 FAM231CP0DMU5 169 aa13.01□□□□□ -0.33
PHGDH-226ENST00000641756 TMEM97Q5BJF2 176 aa13.01□□□□□ -0.33
PHGDH-226ENST00000641756 C11orf72Q8NBR9 251 aa13.01□□□□□ -0.33
PHGDH-226ENST00000641756 NDUFA7O95182 113 aa13.01□□□□□ -0.33
PHGDH-226ENST00000641756 JMJD8Q96S16 334 aa13□□□□□ -0.33
PHGDH-226ENST00000641756 COX11Q9Y6N1 276 aa13□□□□□ -0.33
PHGDH-226ENST00000641756 IGIPA6NJ69 53 aa13□□□□□ -0.33
PHGDH-226ENST00000641756 SIVA1O15304 175 aa13□□□□□ -0.33
PHGDH-226ENST00000641756 NPSP0C0P6 89 aa13□□□□□ -0.33
PHGDH-226ENST00000641756 AZU1P20160 251 aa13□□□□□ -0.33
PHGDH-226ENST00000641756 RIPPLY3P57055 190 aa13□□□□□ -0.33
PHGDH-226ENST00000641756 MRPL16Q9NX20 251 aaKnown RBP13□□□□□ -0.33
PHGDH-226ENST00000641756 CLUHP3Q96NS8 147 aa12.99□□□□□ -0.33
PHGDH-226ENST00000641756 LINC00467Q9BRT7 94 aa12.99□□□□□ -0.33
PHGDH-226ENST00000641756 A8MWV9 139 aa12.98□□□□□ -0.33
PHGDH-226ENST00000641756 UFSP1Q6NVU6 142 aa12.98□□□□□ -0.33
PHGDH-226ENST00000641756 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
PHGDH-226ENST00000641756 WFDC10AQ9H1F0 79 aa12.98□□□□□ -0.33
PHGDH-226ENST00000641756 TRAV8-6A0A0B4J262 113 aa12.98□□□□□ -0.33
PHGDH-226ENST00000641756 TAX1BP3O14907 124 aa12.98□□□□□ -0.33
PHGDH-226ENST00000641756 KRTAP10-3P60369 221 aa12.98□□□□□ -0.33
PHGDH-226ENST00000641756 NACAE9PAV3 2078 aa12.98□□□□□ -0.33
PHGDH-226ENST00000641756 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
PHGDH-226ENST00000641756 Q6ZSN1 163 aa12.97□□□□□ -0.33
PHGDH-226ENST00000641756 MAPKAPK5-AS1Q8N8E1 139 aa12.97□□□□□ -0.33
PHGDH-226ENST00000641756 SETXQ7Z333 2677 aaKnown RBP12.97□□□□□ -0.33
PHGDH-226ENST00000641756 I3L3M4 83 aa12.97□□□□□ -0.33
PHGDH-226ENST00000641756 EMP1P54849 157 aa12.97□□□□□ -0.33
PHGDH-226ENST00000641756 HSD52Q0P140 79 aa12.97□□□□□ -0.33
PHGDH-226ENST00000641756 Q9UF83 564 aa12.97□□□□□ -0.33
PHGDH-226ENST00000641756 NOTCH2Q04721 2471 aa12.96□□□□□ -0.33
PHGDH-226ENST00000641756 NIPBLQ6KC79 2804 aaeCLIP12.96□□□□□ -0.33
PHGDH-226ENST00000641756 IGLV1-51P01701 117 aa12.96□□□□□ -0.33
PHGDH-226ENST00000641756 GAGE1Q13065 139 aa12.96□□□□□ -0.33
PHGDH-226ENST00000641756 ORAOV1Q8WV07 137 aa12.96□□□□□ -0.33
PHGDH-226ENST00000641756 RHOHQ15669 191 aa12.95□□□□□ -0.34
PHGDH-226ENST00000641756 TMEM141Q96I45 108 aa12.95□□□□□ -0.34
PHGDH-226ENST00000641756 TIMM17AQ99595 171 aa12.95□□□□□ -0.34
PHGDH-226ENST00000641756 SPXQ9BT56 116 aa12.95□□□□□ -0.34
PHGDH-226ENST00000641756 TRBV25-1A0A075B6N4 114 aa12.95□□□□□ -0.34
PHGDH-226ENST00000641756 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
PHGDH-226ENST00000641756 INAFM1C9JVW0 142 aa12.95□□□□□ -0.34
PHGDH-226ENST00000641756 PMVKQ15126 192 aa12.95□□□□□ -0.34
PHGDH-226ENST00000641756 OPRPNQ99935 248 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-226ENST00000641756 PIK3CD-AS1Q5SR53 167 aa12.94□□□□□ -0.34
PHGDH-226ENST00000641756 PTH2Q96A98 100 aa12.94□□□□□ -0.34
PHGDH-226ENST00000641756 EDA2RQ9HAV5 297 aa12.94□□□□□ -0.34
PHGDH-226ENST00000641756 IGLV4-69A0A075B6H9 119 aa12.94□□□□□ -0.34
PHGDH-226ENST00000641756 CHAC1Q9BUX1 264 aa12.94□□□□□ -0.34
PHGDH-226ENST00000641756 CST9LQ9H4G1 147 aa12.94□□□□□ -0.34
PHGDH-226ENST00000641756 SEC11AP67812 179 aa12.93□□□□□ -0.34
PHGDH-226ENST00000641756 TNFRSF18Q9Y5U5 241 aa12.93□□□□□ -0.34
PHGDH-226ENST00000641756 C11orf86A6NJI1 115 aa12.92□□□□□ -0.34
PHGDH-226ENST00000641756 RPL35AP18077 110 aaKnown RBP12.92□□□□□ -0.34
PHGDH-226ENST00000641756 BEAN1Q3B7T3 259 aa12.92□□□□□ -0.34
PHGDH-226ENST00000641756 C20orf203Q8NBC4 194 aa12.92□□□□□ -0.34
PHGDH-226ENST00000641756 OTOGQ6ZRI0 2925 aa12.92□□□□□ -0.34
PHGDH-226ENST00000641756 C19orf73Q9NVV2 129 aa12.92□□□□□ -0.34
PHGDH-226ENST00000641756 HIGD1BQ9P298 99 aa12.92□□□□□ -0.34
PHGDH-226ENST00000641756 JMJD1CQ15652 2540 aa12.91□□□□□ -0.34
PHGDH-226ENST00000641756 RS1O15537 224 aa12.91□□□□□ -0.34
PHGDH-226ENST00000641756 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-226ENST00000641756 OR11H2Q8NH07 326 aa12.91□□□□□ -0.34
PHGDH-226ENST00000641756 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
PHGDH-226ENST00000641756 RHODO00212 210 aa12.9□□□□□ -0.34
PHGDH-226ENST00000641756 CMC4P56277 68 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-226ENST00000641756 NDUFA11Q86Y39 141 aa12.9□□□□□ -0.34
PHGDH-226ENST00000641756 RNASE8Q8TDE3 154 aaKnown RBP12.9□□□□□ -0.34
PHGDH-226ENST00000641756 PF4P02776 101 aa12.89□□□□□ -0.35
PHGDH-226ENST00000641756 GCSHP23434 173 aa12.89□□□□□ -0.35
PHGDH-226ENST00000641756 IL17DQ8TAD2 202 aa12.89□□□□□ -0.35
PHGDH-226ENST00000641756 PRADC1Q9BSG0 188 aa12.89□□□□□ -0.35
PHGDH-226ENST00000641756 E9PLD3 99 aa12.89□□□□□ -0.35
PHGDH-226ENST00000641756 K7EP13 123 aa12.89□□□□□ -0.35
PHGDH-226ENST00000641756 VAMP3Q15836 100 aa12.89□□□□□ -0.35
PHGDH-226ENST00000641756 A6NDN8 102 aa12.88□□□□□ -0.35
PHGDH-226ENST00000641756 IGHV3-53P01767 116 aa12.88□□□□□ -0.35
PHGDH-226ENST00000641756 ZNRF2Q8NHG8 242 aa12.88□□□□□ -0.35
PHGDH-226ENST00000641756 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
PHGDH-226ENST00000641756 CCL25O15444 150 aa12.88□□□□□ -0.35
PHGDH-226ENST00000641756 MYMXA0A1B0GTQ4 84 aa12.87□□□□□ -0.35
PHGDH-226ENST00000641756 PTTG1IPP53801 180 aa12.87□□□□□ -0.35
PHGDH-226ENST00000641756 FXYD2P54710 66 aa12.87□□□□□ -0.35
PHGDH-226ENST00000641756 Q6ZTI0 123 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms