RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 COX19Q49B96 90 aa6.93□□□□□ -1.3
PHGDH-222ENST00000641587 FAM74A4Q5TZK3 123 aa6.93□□□□□ -1.3
PHGDH-222ENST00000641587 RASL11AQ6T310 242 aa6.93□□□□□ -1.3
PHGDH-222ENST00000641587 C14orf178Q8N769 122 aaPredicted RBP6.93□□□□□ -1.3
PHGDH-222ENST00000641587 FRZBQ92765 325 aa6.93□□□□□ -1.3
PHGDH-222ENST00000641587 JPT2Q9H910 190 aa6.93□□□□□ -1.3
PHGDH-222ENST00000641587 COLCA2A8K830 154 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 A8MWV9 139 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 IGHV3-53P01767 116 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 ATP5G1P05496 136 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 RAB5AP20339 215 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 EVI2AP22794 236 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 ZNF56Q15929 161 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 OR4C5Q8NGB2 326 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 PTH2Q96A98 100 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 DPH3P1Q9H4G8 78 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 Q9H8V8 135 aa6.92□□□□□ -1.3
PHGDH-222ENST00000641587 IGHV3-73A0A0B4J1V6 119 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 EPM2AB3EWF7 344 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 F5H697 171 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 HLA-DQA1P01909 254 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 MT-ND6P03923 174 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 PIK3CD-AS1Q5SR53 167 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 TMEM136Q6ZRR5 245 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 AMN1Q8IY45 258 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 RASL10AQ92737 203 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 GNB1LQ9BYB4 327 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 TMEM191AQ9H0A3 160 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 TRAPPC1Q9Y5R8 145 aa6.91□□□□□ -1.3
PHGDH-222ENST00000641587 DMBT1Q9UGM3 2413 aaPredicted RBP6.91□□□□□ -1.3
PHGDH-222ENST00000641587 TRAV4A0A0B4J268 109 aa6.9□□□□□ -1.3
PHGDH-222ENST00000641587 A0A0J9YY99 117 aa6.9□□□□□ -1.3
PHGDH-222ENST00000641587 RHODO00212 210 aa6.9□□□□□ -1.3
PHGDH-222ENST00000641587 RS1O15537 224 aa6.9□□□□□ -1.3
PHGDH-222ENST00000641587 APCSP02743 223 aa6.9□□□□□ -1.3
PHGDH-222ENST00000641587 FABP9Q0Z7S8 132 aa6.9□□□□□ -1.3
PHGDH-222ENST00000641587 CFAP126Q5VTH2 177 aa6.9□□□□□ -1.3
PHGDH-222ENST00000641587 SAMD10Q9BYL1 202 aa6.9□□□□□ -1.3
PHGDH-222ENST00000641587 MRPL18Q9H0U6 180 aaKnown RBP6.9□□□□□ -1.3
PHGDH-222ENST00000641587 TRAV26-1A0A087WT03 109 aa6.89□□□□□ -1.31
PHGDH-222ENST00000641587 INAFM2P0DMQ5 153 aa6.89□□□□□ -1.31
PHGDH-222ENST00000641587 TTC32Q5I0X7 151 aa6.89□□□□□ -1.31
PHGDH-222ENST00000641587 FAM104BQ5XKR9 115 aa6.89□□□□□ -1.31
PHGDH-222ENST00000641587 GATD1Q8NB37 220 aa6.89□□□□□ -1.31
PHGDH-222ENST00000641587 ZNF479Q96JC4 524 aa6.89□□□□□ -1.31
PHGDH-222ENST00000641587 TRAV26-2A0A0B4J265 109 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 TRGV4A0A0C4DH28 118 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 NCR2O95944 276 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 CRYGDP07320 174 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 BTF3P20290 206 aaKnown RBP6.88□□□□□ -1.31
PHGDH-222ENST00000641587 HOXA5P20719 270 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 LINC00315P59091 139 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 SLAQ13239 276 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 ESRGQ1W209 222 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 KIAA1644Q3SXP7 199 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 LINC00612Q8N6U2 182 aa6.88□□□□□ -1.31
PHGDH-222ENST00000641587 FLG2Q5D862 2391 aaPredicted RBP6.88□□□□□ -1.31
PHGDH-222ENST00000641587 SMKR1H3BMG3 65 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 TRGC2P03986 189 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 RAB4AP20338 218 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 CKS2P33552 79 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 XGP55808 180 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
PHGDH-222ENST00000641587 SUMO4Q6EEV6 95 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 ZFP2Q6ZN57 461 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 Q6ZRN7 208 aaPredicted RBP6.87□□□□□ -1.31
PHGDH-222ENST00000641587 RNF185Q96GF1 192 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 UPK3BQ9BT76 320 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 KIF25-AS1Q9Y6Z4 181 aa6.87□□□□□ -1.31
PHGDH-222ENST00000641587 D6R8Y8 96 aa6.86□□□□□ -1.31
PHGDH-222ENST00000641587 H7C1H1 209 aa6.86□□□□□ -1.31
PHGDH-222ENST00000641587 CIDEAO60543 219 aa6.86□□□□□ -1.31
PHGDH-222ENST00000641587 Q5VSD8 79 aa6.86□□□□□ -1.31
PHGDH-222ENST00000641587 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
PHGDH-222ENST00000641587 MRAP2Q96G30 205 aa6.86□□□□□ -1.31
PHGDH-222ENST00000641587 PRELID3AQ96N28 172 aa6.86□□□□□ -1.31
PHGDH-222ENST00000641587 MRPS16Q9Y3D3 137 aaKnown RBP6.86□□□□□ -1.31
PHGDH-222ENST00000641587 TNFRSF18Q9Y5U5 241 aa6.86□□□□□ -1.31
PHGDH-222ENST00000641587 C1orf196B1AJZ1 125 aa6.85□□□□□ -1.31
PHGDH-222ENST00000641587 PPBPP02775 128 aa6.85□□□□□ -1.31
PHGDH-222ENST00000641587 GATA1P15976 413 aaPredicted RBP6.85□□□□□ -1.31
PHGDH-222ENST00000641587 SRIP30626 198 aa6.85□□□□□ -1.31
PHGDH-222ENST00000641587 HAMPP81172 84 aa6.85□□□□□ -1.31
PHGDH-222ENST00000641587 OR10J3Q5JRS4 329 aa6.85□□□□□ -1.31
PHGDH-222ENST00000641587 UFSP1Q6NVU6 142 aa6.85□□□□□ -1.31
PHGDH-222ENST00000641587 C18orf15Q96N68 181 aa6.85□□□□□ -1.31
PHGDH-222ENST00000641587 K7EQD1 137 aa6.84□□□□□ -1.31
PHGDH-222ENST00000641587 DNAH10OSP0CZ25 163 aa6.84□□□□□ -1.31
PHGDH-222ENST00000641587 KRTAP10-1P60331 282 aa6.84□□□□□ -1.31
PHGDH-222ENST00000641587 FHL2Q14192 279 aa6.84□□□□□ -1.31
PHGDH-222ENST00000641587 Q6ZSN1 163 aa6.84□□□□□ -1.31
PHGDH-222ENST00000641587 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
PHGDH-222ENST00000641587 PRADC1Q9BSG0 188 aa6.84□□□□□ -1.31
PHGDH-222ENST00000641587 A0A096LPF7 62 aa6.83□□□□□ -1.32
PHGDH-222ENST00000641587 M0QY20 66 aa6.83□□□□□ -1.32
PHGDH-222ENST00000641587 PAX4O43316 350 aa6.83□□□□□ -1.32
PHGDH-222ENST00000641587 GAS8-AS1O95177 125 aa6.83□□□□□ -1.32
PHGDH-222ENST00000641587 NPYP01303 97 aa6.83□□□□□ -1.32
PHGDH-222ENST00000641587 SMR3BP02814 79 aaPredicted RBP6.83□□□□□ -1.32
PHGDH-222ENST00000641587 RHOHQ15669 191 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms