RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PIK3CD-AS1Q5SR53 167 aa12□□□□□ -0.49
PHGDH-216ENST00000641375 RASL10AQ92737 203 aa12□□□□□ -0.49
PHGDH-216ENST00000641375 MAP1LC3CQ9BXW4 147 aa12□□□□□ -0.49
PHGDH-216ENST00000641375 JPT2Q9H910 190 aa12□□□□□ -0.49
PHGDH-216ENST00000641375 ATRQ13535 2644 aa11.99□□□□□ -0.49
PHGDH-216ENST00000641375 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
PHGDH-216ENST00000641375 A0A087WWL8 130 aa11.99□□□□□ -0.49
PHGDH-216ENST00000641375 A0A096LNJ9 63 aa11.99□□□□□ -0.49
PHGDH-216ENST00000641375 SUMO2P61956 95 aaKnown RBP11.99□□□□□ -0.49
PHGDH-216ENST00000641375 PTH2Q96A98 100 aa11.99□□□□□ -0.49
PHGDH-216ENST00000641375 M0R2P5 195 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 FAM74A4Q5TZK3 123 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 SPATA12Q7Z6I5 190 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 PMCHL2Q9BQD1 86 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 SPXQ9BT56 116 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 C1QTNF4Q9BXJ3 329 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 F5H697 171 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 SYS1-DBNDD2H3BUS1 97 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 MORN3Q6PF18 240 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-216ENST00000641375 GTSCR1Q86UQ5 136 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 C1orf158Q8N1D5 194 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 MCRIP2Q9BUT9 160 aaKnown RBP11.98□□□□□ -0.49
PHGDH-216ENST00000641375 ZNF747Q9BV97 191 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 WFDC10AQ9H1F0 79 aa11.98□□□□□ -0.49
PHGDH-216ENST00000641375 CRYGDP07320 174 aa11.97□□□□□ -0.49
PHGDH-216ENST00000641375 LINC00173Q6ZV60 143 aa11.97□□□□□ -0.49
PHGDH-216ENST00000641375 K7EMI3 77 aa11.96□□□□□ -0.49
PHGDH-216ENST00000641375 K7EP34 96 aa11.96□□□□□ -0.49
PHGDH-216ENST00000641375 FCER1GP30273 86 aa11.96□□□□□ -0.49
PHGDH-216ENST00000641375 SUMO4Q6EEV6 95 aa11.96□□□□□ -0.49
PHGDH-216ENST00000641375 C11orf72Q8NBR9 251 aa11.96□□□□□ -0.49
PHGDH-216ENST00000641375 LAGE3Q14657 143 aa11.96□□□□□ -0.5
PHGDH-216ENST00000641375 RPL39LQ96EH5 51 aaKnown RBP11.96□□□□□ -0.5
PHGDH-216ENST00000641375 C9orf118A6NHY6 69 aa11.95□□□□□ -0.5
PHGDH-216ENST00000641375 A8MWV9 139 aa11.95□□□□□ -0.5
PHGDH-216ENST00000641375 H3BRM9 83 aa11.95□□□□□ -0.5
PHGDH-216ENST00000641375 PRM2P04554 102 aa11.95□□□□□ -0.5
PHGDH-216ENST00000641375 ZNF56Q15929 161 aa11.95□□□□□ -0.5
PHGDH-216ENST00000641375 VWFP04275 2813 aa11.95□□□□□ -0.5
PHGDH-216ENST00000641375 IGHV3OR16-12A0A075B7B8 117 aa11.95□□□□□ -0.5
PHGDH-216ENST00000641375 RPL35AP18077 110 aaKnown RBP11.95□□□□□ -0.5
PHGDH-216ENST00000641375 OR5A1Q8NGJ0 315 aa11.95□□□□□ -0.5
PHGDH-216ENST00000641375 TP73-AS1Q9UF72 201 aa11.95□□□□□ -0.5
PHGDH-216ENST00000641375 RPL32P62910 135 aaKnown RBP11.94□□□□□ -0.5
PHGDH-216ENST00000641375 hDV102S1A0JD36 115 aa11.94□□□□□ -0.5
PHGDH-216ENST00000641375 GIG44P09565 113 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-216ENST00000641375 ORMDL2Q53FV1 153 aa11.93□□□□□ -0.5
PHGDH-216ENST00000641375 WFDC9Q8NEX5 89 aa11.93□□□□□ -0.5
PHGDH-216ENST00000641375 SPATA3Q8NHX4 192 aa11.92□□□□□ -0.5
PHGDH-216ENST00000641375 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
PHGDH-216ENST00000641375 TMEM158Q8WZ71 300 aa11.92□□□□□ -0.5
PHGDH-216ENST00000641375 SIGMAR1Q99720 223 aa11.92□□□□□ -0.5
PHGDH-216ENST00000641375 A6NDN8 102 aa11.92□□□□□ -0.5
PHGDH-216ENST00000641375 M0QY20 66 aa11.92□□□□□ -0.5
PHGDH-216ENST00000641375 AZU1P20160 251 aa11.92□□□□□ -0.5
PHGDH-216ENST00000641375 KRTAP24-1Q3LI83 254 aa11.92□□□□□ -0.5
PHGDH-216ENST00000641375 TMEM97Q5BJF2 176 aa11.92□□□□□ -0.5
PHGDH-216ENST00000641375 TRBV6-5A0A0K0K1A5 114 aa11.91□□□□□ -0.5
PHGDH-216ENST00000641375 H7C1H1 209 aa11.91□□□□□ -0.5
PHGDH-216ENST00000641375 COX8AP10176 69 aa11.91□□□□□ -0.5
PHGDH-216ENST00000641375 IFI27L1Q96BM0 104 aa11.91□□□□□ -0.5
PHGDH-216ENST00000641375 EDA2RQ9HAV5 297 aa11.91□□□□□ -0.5
PHGDH-216ENST00000641375 A6NJY4 79 aa11.9□□□□□ -0.5
PHGDH-216ENST00000641375 H0Y8G0 127 aa11.9□□□□□ -0.5
PHGDH-216ENST00000641375 RHODO00212 210 aa11.9□□□□□ -0.5
PHGDH-216ENST00000641375 POLR2KP53803 58 aaKnown RBP11.9□□□□□ -0.5
PHGDH-216ENST00000641375 LINC01545Q5VT33 79 aa11.9□□□□□ -0.5
PHGDH-216ENST00000641375 C2orf91Q6ZV80 131 aa11.9□□□□□ -0.5
PHGDH-216ENST00000641375 CSNK1G2-AS1Q8NCQ2 148 aa11.9□□□□□ -0.5
PHGDH-216ENST00000641375 IL17DQ8TAD2 202 aa11.9□□□□□ -0.5
PHGDH-216ENST00000641375 NOTCH3Q9UM47 2321 aa11.89□□□□□ -0.51
PHGDH-216ENST00000641375 CYSRT1A8MQ03 144 aa11.89□□□□□ -0.51
PHGDH-216ENST00000641375 VCYO14598 125 aa11.89□□□□□ -0.51
PHGDH-216ENST00000641375 SDHAF1A6NFY7 115 aa11.89□□□□□ -0.51
PHGDH-216ENST00000641375 CFAP126Q5VTH2 177 aa11.89□□□□□ -0.51
PHGDH-216ENST00000641375 C16orf74Q96GX8 76 aa11.89□□□□□ -0.51
PHGDH-216ENST00000641375 KIR2DL4Q99706 377 aa11.89□□□□□ -0.51
PHGDH-216ENST00000641375 WIPF1O43516 503 aa11.88□□□□□ -0.51
PHGDH-216ENST00000641375 ATP5LO75964 103 aa11.88□□□□□ -0.51
PHGDH-216ENST00000641375 MRPL16Q9NX20 251 aaKnown RBP11.88□□□□□ -0.51
PHGDH-216ENST00000641375 TRBV27A0A0K0K1C4 114 aa11.88□□□□□ -0.51
PHGDH-216ENST00000641375 NACAE9PAV3 2078 aa11.88□□□□□ -0.51
PHGDH-216ENST00000641375 HSD52Q0P140 79 aa11.87□□□□□ -0.51
PHGDH-216ENST00000641375 LGALS9BQ3B8N2 356 aa11.87□□□□□ -0.51
PHGDH-216ENST00000641375 LGALS9CQ6DKI2 356 aa11.87□□□□□ -0.51
PHGDH-216ENST00000641375 C18orf15Q96N68 181 aa11.87□□□□□ -0.51
PHGDH-216ENST00000641375 RS1O15537 224 aa11.86□□□□□ -0.51
PHGDH-216ENST00000641375 ZFP2Q6ZN57 461 aa11.86□□□□□ -0.51
PHGDH-216ENST00000641375 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
PHGDH-216ENST00000641375 H3BUT2 72 aa11.86□□□□□ -0.51
PHGDH-216ENST00000641375 DAZ2Q13117 558 aaKnown RBP11.86□□□□□ -0.51
PHGDH-216ENST00000641375 RRN3P1Q2M238 152 aa11.86□□□□□ -0.51
PHGDH-216ENST00000641375 CFAP161Q6P656 301 aa11.86□□□□□ -0.51
PHGDH-216ENST00000641375 C3orf56Q8N813 242 aa11.86□□□□□ -0.51
PHGDH-216ENST00000641375 TRGV1A0A0A0MS02 117 aa11.85□□□□□ -0.51
PHGDH-216ENST00000641375 IGHV3-73A0A0B4J1V6 119 aa11.85□□□□□ -0.51
PHGDH-216ENST00000641375 TOMM6Q96B49 74 aa11.85□□□□□ -0.51
PHGDH-216ENST00000641375 A0A1W2PPM0 123 aa11.84□□□□□ -0.51
PHGDH-216ENST00000641375 SHISA2Q6UWI4 295 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms