RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 UFSP1Q6NVU6 142 aa12.5□□□□□ -0.41
PHGDH-208ENST00000641023 NEGR1Q7Z3B1 354 aa12.5□□□□□ -0.41
PHGDH-208ENST00000641023 CSNK1G2-AS1Q8NCQ2 148 aa12.5□□□□□ -0.41
PHGDH-208ENST00000641023 UQCR10Q9UDW1 63 aa12.5□□□□□ -0.41
PHGDH-208ENST00000641023 TENM1Q9UKZ4 2725 aa12.5□□□□□ -0.41
PHGDH-208ENST00000641023 LINC01549A6NIU2 74 aa12.5□□□□□ -0.41
PHGDH-208ENST00000641023 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-208ENST00000641023 C2orf66Q6UXQ4 117 aa12.5□□□□□ -0.41
PHGDH-208ENST00000641023 IL17DQ8TAD2 202 aa12.5□□□□□ -0.41
PHGDH-208ENST00000641023 hDV102S1A0JD36 115 aa12.49□□□□□ -0.41
PHGDH-208ENST00000641023 WFDC9Q8NEX5 89 aa12.49□□□□□ -0.41
PHGDH-208ENST00000641023 RS1O15537 224 aa12.49□□□□□ -0.41
PHGDH-208ENST00000641023 ZFP2Q6ZN57 461 aa12.49□□□□□ -0.41
PHGDH-208ENST00000641023 C16orf74Q96GX8 76 aa12.49□□□□□ -0.41
PHGDH-208ENST00000641023 SCGB3A1Q96QR1 104 aa12.49□□□□□ -0.41
PHGDH-208ENST00000641023 Q6ZN92 141 aa12.48□□□□□ -0.41
PHGDH-208ENST00000641023 NOTCH3Q9UM47 2321 aa12.48□□□□□ -0.41
PHGDH-208ENST00000641023 TRGV1A0A0A0MS02 117 aa12.47□□□□□ -0.41
PHGDH-208ENST00000641023 RRN3P1Q2M238 152 aa12.47□□□□□ -0.41
PHGDH-208ENST00000641023 LURAP1LQ8IV03 231 aa12.47□□□□□ -0.41
PHGDH-208ENST00000641023 CYSLTR1Q9Y271 337 aa12.47□□□□□ -0.41
PHGDH-208ENST00000641023 BAHCC1Q9P281 2608 aa12.47□□□□□ -0.41
PHGDH-208ENST00000641023 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
PHGDH-208ENST00000641023 I3L3M4 83 aa12.46□□□□□ -0.41
PHGDH-208ENST00000641023 ODF1Q14990 250 aa12.46□□□□□ -0.41
PHGDH-208ENST00000641023 DKK2Q9UBU2 259 aa12.46□□□□□ -0.41
PHGDH-208ENST00000641023 TNFRSF18Q9Y5U5 241 aa12.46□□□□□ -0.41
PHGDH-208ENST00000641023 VWFP04275 2813 aa12.46□□□□□ -0.42
PHGDH-208ENST00000641023 KRTAP24-1Q3LI83 254 aa12.46□□□□□ -0.42
PHGDH-208ENST00000641023 ERASQ7Z444 233 aa12.46□□□□□ -0.42
PHGDH-208ENST00000641023 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.42
PHGDH-208ENST00000641023 IGHV3-53P01767 116 aa12.45□□□□□ -0.42
PHGDH-208ENST00000641023 NOP10Q9NPE3 64 aaKnown RBP12.44□□□□□ -0.42
PHGDH-208ENST00000641023 TP53TG1Q9Y2A0 90 aa12.44□□□□□ -0.42
PHGDH-208ENST00000641023 RIPPLY3P57055 190 aa12.44□□□□□ -0.42
PHGDH-208ENST00000641023 RHOHQ15669 191 aa12.44□□□□□ -0.42
PHGDH-208ENST00000641023 Q6ZTI0 123 aa12.44□□□□□ -0.42
PHGDH-208ENST00000641023 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
PHGDH-208ENST00000641023 A0A087WX48 190 aa12.43□□□□□ -0.42
PHGDH-208ENST00000641023 TRAV12-1A0A0B4J245 112 aa12.43□□□□□ -0.42
PHGDH-208ENST00000641023 P0DMU3 169 aa12.43□□□□□ -0.42
PHGDH-208ENST00000641023 FAM231AP0DMU4 169 aa12.43□□□□□ -0.42
PHGDH-208ENST00000641023 FAM231CP0DMU5 169 aa12.43□□□□□ -0.42
PHGDH-208ENST00000641023 Q6ZSN1 163 aa12.43□□□□□ -0.42
PHGDH-208ENST00000641023 DNAJC30Q96LL9 226 aa12.43□□□□□ -0.42
PHGDH-208ENST00000641023 ZMAT4Q9H898 229 aa12.43□□□□□ -0.42
PHGDH-208ENST00000641023 IGKCP01834 107 aa12.42□□□□□ -0.42
PHGDH-208ENST00000641023 PLAC8L1A1L4L8 177 aa12.42□□□□□ -0.42
PHGDH-208ENST00000641023 WIPF1O43516 503 aa12.42□□□□□ -0.42
PHGDH-208ENST00000641023 DPM2O94777 84 aa12.42□□□□□ -0.42
PHGDH-208ENST00000641023 HNRNPA3P51991 378 aaKnown RBP12.42□□□□□ -0.42
PHGDH-208ENST00000641023 NACAE9PAV3 2078 aa12.41□□□□□ -0.42
PHGDH-208ENST00000641023 TRAV4A0A0B4J268 109 aa12.41□□□□□ -0.42
PHGDH-208ENST00000641023 TSHBP01222 138 aa12.41□□□□□ -0.42
PHGDH-208ENST00000641023 NEXN-AS1Q8NBZ9 246 aa12.41□□□□□ -0.42
PHGDH-208ENST00000641023 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
PHGDH-208ENST00000641023 STPG4Q8N801 248 aa12.41□□□□□ -0.42
PHGDH-208ENST00000641023 TMEM141Q96I45 108 aa12.41□□□□□ -0.42
PHGDH-208ENST00000641023 MRPL35Q9NZE8 188 aaKnown RBP12.41□□□□□ -0.42
PHGDH-208ENST00000641023 CYSRT1A8MQ03 144 aa12.4□□□□□ -0.42
PHGDH-208ENST00000641023 M0R143 59 aa12.4□□□□□ -0.42
PHGDH-208ENST00000641023 SLC25A34Q6PIV7 304 aa12.4□□□□□ -0.42
PHGDH-208ENST00000641023 MRPL52Q86TS9 123 aaKnown RBP12.4□□□□□ -0.42
PHGDH-208ENST00000641023 C3orf56Q8N813 242 aa12.4□□□□□ -0.42
PHGDH-208ENST00000641023 BAALCQ8WXS3 180 aa12.4□□□□□ -0.42
PHGDH-208ENST00000641023 ZNF479Q96JC4 524 aa12.4□□□□□ -0.42
PHGDH-208ENST00000641023 TIMM17AQ99595 171 aa12.4□□□□□ -0.42
PHGDH-208ENST00000641023 IGIPA6NJ69 53 aa12.39□□□□□ -0.43
PHGDH-208ENST00000641023 RPL39P62891 51 aaKnown RBP12.39□□□□□ -0.43
PHGDH-208ENST00000641023 LBHQ53QV2 105 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-208ENST00000641023 TRGV2A0A075B6R0 118 aa12.39□□□□□ -0.43
PHGDH-208ENST00000641023 F8VRH5 84 aa12.39□□□□□ -0.43
PHGDH-208ENST00000641023 CIDEAO60543 219 aa12.39□□□□□ -0.43
PHGDH-208ENST00000641023 PLNP26678 52 aa12.39□□□□□ -0.43
PHGDH-208ENST00000641023 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
PHGDH-208ENST00000641023 KIR2DL5BQ8NHK3 375 aa12.39□□□□□ -0.43
PHGDH-208ENST00000641023 HHLA3Q9XRX5 114 aa12.39□□□□□ -0.43
PHGDH-208ENST00000641023 ANKRD39Q53RE8 183 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 CHTOPQ9Y3Y2 248 aaKnown RBP12.38□□□□□ -0.43
PHGDH-208ENST00000641023 TRRAPQ9Y4A5 3859 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 GAGE12BA1L429 117 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 GAGE7O76087 117 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 GAGE12FP0CL80 117 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 GAGE12GP0CL81 117 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 GAGE12IP0CL82 117 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 COX8AP10176 69 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 APOC4P55056 127 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 SHISA2Q6UWI4 295 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 Q9UF83 564 aa12.38□□□□□ -0.43
PHGDH-208ENST00000641023 MRPS16Q9Y3D3 137 aaKnown RBP12.38□□□□□ -0.43
PHGDH-208ENST00000641023 SMIM9A6NGZ8 99 aa12.37□□□□□ -0.43
PHGDH-208ENST00000641023 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
PHGDH-208ENST00000641023 TRBV10-1A0A0K0K1A3 114 aa12.36□□□□□ -0.43
PHGDH-208ENST00000641023 SNHG12Q9BXW3 62 aa12.36□□□□□ -0.43
PHGDH-208ENST00000641023 PRSS29PA6NIE9 313 aa12.36□□□□□ -0.43
PHGDH-208ENST00000641023 TRBV7-3A0A075B6L6 115 aa12.35□□□□□ -0.43
PHGDH-208ENST00000641023 K7EQD1 137 aa12.35□□□□□ -0.43
PHGDH-208ENST00000641023 EMP1P54849 157 aa12.35□□□□□ -0.43
PHGDH-208ENST00000641023 PMVKQ15126 192 aa12.35□□□□□ -0.43
PHGDH-208ENST00000641023 ZC2HC1BQ5TFG8 222 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms