RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 NBL1P41271 181 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 MRPL23Q16540 153 aaKnown RBP10.35□□□□□ -0.75
SCARB2-227ENST00000640957 IGF2-ASQ6U949 168 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 C2orf82Q6UX34 121 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 UNQ9165/PRO28630Q6UXU0 137 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 SLC25A29Q8N8R3 303 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 EDN2P20800 178 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 LINC01620Q4KN68 170 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 EEF1AKMT3Q96AZ1 226 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 METTL26Q96S19 204 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 PPDPFQ9H3Y8 114 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 ZANQ9Y493 2812 aa10.35□□□□□ -0.75
SCARB2-227ENST00000640957 ZFP36P26651 326 aaKnown RBP10.34□□□□□ -0.75
SCARB2-227ENST00000640957 MTORP42345 2549 aa10.34□□□□□ -0.75
SCARB2-227ENST00000640957 TRIAP1O43715 76 aa10.34□□□□□ -0.75
SCARB2-227ENST00000640957 PMVKQ15126 192 aa10.34□□□□□ -0.75
SCARB2-227ENST00000640957 CFAP46Q8IYW2 2715 aa10.34□□□□□ -0.75
SCARB2-227ENST00000640957 TRAV12-2A0A075B6T6 113 aa10.34□□□□□ -0.75
SCARB2-227ENST00000640957 SDHAF1A6NFY7 115 aa10.34□□□□□ -0.75
SCARB2-227ENST00000640957 ID1P41134 155 aa10.34□□□□□ -0.75
SCARB2-227ENST00000640957 GPHB5Q86YW7 130 aa10.34□□□□□ -0.75
SCARB2-227ENST00000640957 ADORA2A-AS1P86434 159 aa10.33□□□□□ -0.76
SCARB2-227ENST00000640957 TMEM95Q3KNT9 176 aa10.32□□□□□ -0.76
SCARB2-227ENST00000640957 ZNF625Q96I27 306 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-227ENST00000640957 BPESC1Q9GZL8 116 aa10.32□□□□□ -0.76
SCARB2-227ENST00000640957 UBE2E1P51965 193 aa10.32□□□□□ -0.76
SCARB2-227ENST00000640957 SUMO4Q6EEV6 95 aa10.32□□□□□ -0.76
SCARB2-227ENST00000640957 KLK5Q9Y337 293 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-227ENST00000640957 ZFAND2AQ8N6M9 145 aa10.32□□□□□ -0.76
SCARB2-227ENST00000640957 CELSR2Q9HCU4 2923 aa10.32□□□□□ -0.76
SCARB2-227ENST00000640957 PRM2P04554 102 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 KLRB1Q12918 225 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 H3BMM0 161 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 RNASE3P12724 160 aaKnown RBP10.31□□□□□ -0.76
SCARB2-227ENST00000640957 SAA4P35542 130 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 TMEM263Q8WUH6 116 aaKnown RBP10.31□□□□□ -0.76
SCARB2-227ENST00000640957 UBE2WQ96B02 151 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 DUX5Q96PT3 197 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 LOC107984640A0A0U1RRK4 108 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 A0A1W2PPR1 153 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 IGIPA6NJ69 53 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 NPBQ8NG41 125 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 OR10J6PQ8NGY7 276 aa10.31□□□□□ -0.76
SCARB2-227ENST00000640957 Q8N9W7 124 aa10.3□□□□□ -0.76
SCARB2-227ENST00000640957 ACANP16112 2415 aa10.3□□□□□ -0.76
SCARB2-227ENST00000640957 AMELXQ99217 191 aa10.3□□□□□ -0.76
SCARB2-227ENST00000640957 ITPR1Q14643 2758 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 P0DMU3 169 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 FAM231AP0DMU4 169 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 FAM231CP0DMU5 169 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 ADAMTSL4-AS1Q5T5F5 129 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 TRAV21A0A0B4J279 112 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 SBSPONQ8IVN8 264 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 KLK9Q9UKQ9 250 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 ATXN8Q156A1 80 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 C9orf47Q6ZRZ4 202 aa10.29□□□□□ -0.76
SCARB2-227ENST00000640957 LINC01619G3V211 115 aa10.28□□□□□ -0.76
SCARB2-227ENST00000640957 MAPK1IP1LQ8NDC0 245 aa10.28□□□□□ -0.76
SCARB2-227ENST00000640957 RNF5Q99942 180 aa10.28□□□□□ -0.76
SCARB2-227ENST00000640957 GNLYP22749 145 aa10.28□□□□□ -0.76
SCARB2-227ENST00000640957 SRSF2Q01130 221 aaKnown RBP10.28□□□□□ -0.76
SCARB2-227ENST00000640957 TRGV11A0A075B6L2 103 aa10.27□□□□□ -0.76
SCARB2-227ENST00000640957 CENPVL3A0A0U1RRI6 287 aa10.27□□□□□ -0.76
SCARB2-227ENST00000640957 FAM236AA0A1B0GUQ0 79 aa10.27□□□□□ -0.76
SCARB2-227ENST00000640957 FAM236BA0A1B0GV22 79 aa10.27□□□□□ -0.76
SCARB2-227ENST00000640957 OOSP1A8MZH6 123 aa10.27□□□□□ -0.76
SCARB2-227ENST00000640957 H7C423 109 aa10.27□□□□□ -0.77
SCARB2-227ENST00000640957 PF4V1P10720 104 aa10.27□□□□□ -0.77
SCARB2-227ENST00000640957 NRGNQ92686 78 aa10.27□□□□□ -0.77
SCARB2-227ENST00000640957 MDFICQ9P1T7 246 aa10.27□□□□□ -0.77
SCARB2-227ENST00000640957 Q9UF83 564 aa10.27□□□□□ -0.77
SCARB2-227ENST00000640957 KNCNA6PVL3 124 aa10.26□□□□□ -0.77
SCARB2-227ENST00000640957 PROK1P58294 105 aa10.26□□□□□ -0.77
SCARB2-227ENST00000640957 ANKRD17O75179 2603 aaKnown RBP10.25□□□□□ -0.77
SCARB2-227ENST00000640957 A0A0J9YXY3 114 aa10.25□□□□□ -0.77
SCARB2-227ENST00000640957 M0QXV9 152 aa10.25□□□□□ -0.77
SCARB2-227ENST00000640957 FAM110AQ9BQ89 295 aa10.25□□□□□ -0.77
SCARB2-227ENST00000640957 IGHV4-4A0A075B6R2 117 aa10.24□□□□□ -0.77
SCARB2-227ENST00000640957 TRAV41A0A0B4J266 112 aa10.24□□□□□ -0.77
SCARB2-227ENST00000640957 LGALS9O00182 355 aa10.24□□□□□ -0.77
SCARB2-227ENST00000640957 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
SCARB2-227ENST00000640957 C19orf84I3L1E1 186 aa10.24□□□□□ -0.77
SCARB2-227ENST00000640957 VCYO14598 125 aa10.24□□□□□ -0.77
SCARB2-227ENST00000640957 LINC00315P59091 139 aa10.24□□□□□ -0.77
SCARB2-227ENST00000640957 M0R1W7 72 aa10.24□□□□□ -0.77
SCARB2-227ENST00000640957 LINC00694P0DN24 101 aa10.24□□□□□ -0.77
SCARB2-227ENST00000640957 JMJD1CQ15652 2540 aa10.23□□□□□ -0.77
SCARB2-227ENST00000640957 TRBV10-2A0A0K0K1G8 114 aa10.23□□□□□ -0.77
SCARB2-227ENST00000640957 ICOSQ9Y6W8 199 aa10.23□□□□□ -0.77
SCARB2-227ENST00000640957 IGHV3-30-3P0DP02 117 aa10.23□□□□□ -0.77
SCARB2-227ENST00000640957 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
SCARB2-227ENST00000640957 IGHV3-38A0A0C4DH36 116 aa10.22□□□□□ -0.77
SCARB2-227ENST00000640957 LY6G5BQ8NDX9 201 aa10.22□□□□□ -0.77
SCARB2-227ENST00000640957 IGSF10Q6WRI0 2623 aa10.22□□□□□ -0.77
SCARB2-227ENST00000640957 TMEM223A0PJW6 202 aa10.22□□□□□ -0.77
SCARB2-227ENST00000640957 FAM110DQ8TAY7 271 aaPredicted RBP10.22□□□□□ -0.77
SCARB2-227ENST00000640957 DOPEY1Q5JWR5 2465 aa10.21□□□□□ -0.78
SCARB2-227ENST00000640957 M0R2P5 195 aa10.21□□□□□ -0.78
SCARB2-227ENST00000640957 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.78
SCARB2-227ENST00000640957 ATP5J2P56134 94 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms