RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	IGHG4	P01861	327 aa		5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	IFI27	P40305	119 aa	Predicted RBP	5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	ASIP	P42127	132 aa		5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	SNRPD3	P62318	126 aa	Known RBP	5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	ERCC8	Q13216	396 aa		5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	LGALS9B	Q3B8N2	356 aa		5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	LGALS9C	Q6DKI2	356 aa		5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	AMN1	Q8IY45	258 aa		5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	RNF182	Q8N6D2	247 aa		5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	MYOZ3	Q8TDC0	251 aa		5.14	□□□□□ -1.59
PAX6-267	ENST00000640251	RYR3	Q15413	4870 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	TRAV8-2	A0A0B4J237	113 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	LINC01546	A6NGU7	62 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	ZNF207	O43670	478 aa	Known RBP	5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	SMIM17	P0DL12	118 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	FCER1G	P30273	86 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	LEP	P41159	167 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	ZNF80	P51504	273 aa	Predicted RBP	5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	DEFB136	Q30KP8	78 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	NDUFA11	Q86Y39	141 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	ATOH7	Q8N100	152 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	DEFB125	Q8N687	156 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251		Q8N8P6	123 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	OR8A1	Q8NGG7	326 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	IFI27L1	Q96BM0	104 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	RHPN1-AS1	Q9BWJ2	59 aa		5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.13	□□□□□ -1.59
PAX6-267	ENST00000640251	IGHV3OR16-13	A0A075B7E8	117 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	IGHV3-74	A0A0B4J1X5	117 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	PRSS47	A8MTI9	375 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	SIVA1	O15304	175 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	SNAI2	O43623	268 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	DUSP14	O95147	198 aa	Known RBP	5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	ZNF25	P17030	456 aa	Predicted RBP	5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	HLA-DMB	P28068	263 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	KRTAP10-6	P60371	365 aa	Predicted RBP	5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	LAGE3	Q14657	143 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	ORMDL2	Q53FV1	153 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	DEFB121	Q5J5C9	76 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	OR9G4	Q8NGQ1	327 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	OR2K2	Q8NGT1	345 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	ORAOV1	Q8WV07	137 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	ODF3	Q96PU9	254 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	C20orf78	Q9BR46	151 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	PHLDA3	Q9Y5J5	127 aa		5.12	□□□□□ -1.59
PAX6-267	ENST00000640251	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.11	□□□□□ -1.59
PAX6-267	ENST00000640251	IGHV3-49	A0A0A0MS15	119 aa		5.11	□□□□□ -1.59
PAX6-267	ENST00000640251		H0Y8G0	127 aa		5.11	□□□□□ -1.59
PAX6-267	ENST00000640251	IGHV3-11	P01762	117 aa		5.11	□□□□□ -1.59
PAX6-267	ENST00000640251	PRSS1	P07477	247 aa		5.11	□□□□□ -1.59
PAX6-267	ENST00000640251	COX8A	P10176	69 aa		5.11	□□□□□ -1.59
PAX6-267	ENST00000640251	RNASE4	P34096	147 aa	Known RBP	5.11	□□□□□ -1.59
PAX6-267	ENST00000640251	FAM159A	Q6UWV7	190 aa		5.11	□□□□□ -1.59
PAX6-267	ENST00000640251	DPH3P1	Q9H4G8	78 aa		5.11	□□□□□ -1.59
PAX6-267	ENST00000640251	IGKV3D-20	A0A0C4DH25	116 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251		A6NDN8	102 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251		M0R381	172 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	LGALS9	O00182	355 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	DLEU1	O43261	78 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	NPY	P01303	97 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	PSMB8	P28062	276 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	SEC11A	P67812	179 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	WFDC9	Q8NEX5	89 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	AP1S3	Q96PC3	154 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	SCRT2	Q9NQ03	307 aa		5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5.1	□□□□□ -1.59
PAX6-267	ENST00000640251	MUC21	A0A0G2JKD1	596 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	MUC21	A0A140T8X8	626 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	SOCS3	O14543	225 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	DPM2	O94777	84 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	LGALS1	P09382	135 aa	Known RBP	5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	PLN	P26678	52 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	HINT1	P49773	126 aa	Predicted RBP	5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	TMEM97	Q5BJF2	176 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	MUC21	Q5SSG8	566 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	UNQ9165/PRO28630	Q6UXU0	137 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	APRG1	Q8IVJ8	170 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	KLHL30-AS1	Q8NEE0	82 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	RNF185	Q96GF1	192 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	UBE2E2	Q96LR5	201 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	TMEM208	Q9BTX3	173 aa		5.09	□□□□□ -1.59
PAX6-267	ENST00000640251	TRAV2	A0A0B4J234	112 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	SMKR1	H3BMG3	65 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251		H3BVH4	76 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	GAS8-AS1	O95177	125 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	NCR2	O95944	276 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	IGKC	P01834	107 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	EVI2A	P22794	236 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	RPL32	P62910	135 aa	Known RBP	5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	LINC00173	Q6ZV60	143 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	ZFAND2A	Q8N6M9	145 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	FAM19A4	Q96LR4	140 aa		5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.08	□□□□□ -1.6
PAX6-267	ENST00000640251	C7orf71	A4D174	169 aa		5.07	□□□□□ -1.6
PAX6-267	ENST00000640251	TRBV12-3	P01733	135 aa		5.07	□□□□□ -1.6
PAX6-267	ENST00000640251	HLA-DRB4	P13762	266 aa		5.07	□□□□□ -1.6
PAX6-267	ENST00000640251	MAJIN	Q3KP22	176 aa		5.07	□□□□□ -1.6
PAX6-267	ENST00000640251	BOD1L2	Q8IYS8	172 aa		5.07	□□□□□ -1.6
PAX6-267	ENST00000640251	SCGB3A1	Q96QR1	104 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms