RNA–Protein interactions for RNA: ENST00000635030.1

SMARCA2-233, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 4

Gene SMARCA2, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-233	ENST00000635030	CTSZ	Q9UBR2	303 aa		3.91	□□□□□ -1.78
SMARCA2-233	ENST00000635030	LENEP	Q9Y5L5	61 aa		3.91	□□□□□ -1.78
SMARCA2-233	ENST00000635030	TNC	P24821	2201 aa		3.91	□□□□□ -1.78
SMARCA2-233	ENST00000635030	IGKV1D-17	A0A075B6S4	117 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGHV4OR15-8	A0A075B7B6	117 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030		A0A087WW49	117 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TRAV12-3	A0A0B4J271	114 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGHV1-18	A0A0C4DH31	117 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TRBV27	A0A0K0K1C4	114 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030		I3L2K1	104 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	ERC2-IT1	O76042	136 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TSHB	P01222	138 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGHV3-9	P01782	118 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	MGP	P08493	103 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGHV3-30-3	P0DP02	117 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	HILS1	P60008	231 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	DAD1	P61803	113 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	HCP5	Q6MZN7	132 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030		Q8TAT8	98 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	OBSCN-AS1	Q96MR7	158 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	NDUFA12	Q9UI09	145 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	MALRD1	Q5VYJ5	2156 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030	PCNT	O95613	3336 aa		3.9	□□□□□ -1.79
SMARCA2-233	ENST00000635030		A0A087WVE0	104 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGKV3D-20	A0A0C4DH25	116 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	LMO7DN	F2Z398	122 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030		F8WEM9	126 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030		H0YGX0	51 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	CCL21	O00585	134 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGKV1-17	P01599	117 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGLV2-23	P01705	113 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	ESRG	Q1W209	222 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	LEAP2	Q969E1	77 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	CCL13	Q99616	98 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	UBL5	Q9BZL1	73 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	PHLDA3	Q9Y5J5	127 aa		3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	PRRC2B	Q5JSZ5	2229 aa	Known RBP	3.89	□□□□□ -1.79
SMARCA2-233	ENST00000635030	FREM1	Q5H8C1	2179 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TRAV23DV6	A0A075B6W5	121 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TRBV6-5	A0A0K0K1A5	114 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030		E7EUB6	86 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	NDUFA1	O15239	70 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	NDUFS5	O43920	106 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TRBV12-3	P01733	135 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	S100A4	P26447	101 aa	Known RBP	3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	POLR2K	P53803	58 aa	Known RBP	3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	C10orf55	Q5SWW7	151 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	PMS2CL	Q68D20	193 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	LYPD5	Q6UWN5	251 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGFL2	Q6UWQ7	119 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	VMO1	Q7Z5L0	202 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	RPL39L	Q96EH5	51 aa	Known RBP	3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	RNF5	Q99942	180 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	LINC00846	Q9NV44	126 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	ARHGAP32	A7KAX9	2087 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	NAV3	Q8IVL0	2385 aa		3.88	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TRAV21	A0A0B4J279	112 aa		3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030		M0R1B8	84 aa		3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030	RNASE4	P34096	147 aa	Known RBP	3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030	RPL28	P46779	137 aa	Known RBP	3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030	UBE2B	P63146	152 aa		3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TFF2	Q03403	129 aa		3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030	C9orf47	Q6ZRZ4	202 aa		3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030	KTN1-AS1	Q86SY8	53 aa		3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030	LY6G5B	Q8NDX9	201 aa		3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030	RNF186	Q9NXI6	227 aa		3.87	□□□□□ -1.79
SMARCA2-233	ENST00000635030	SEC16A	O15027	2179 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGHV3-64D	A0A0J9YX35	117 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGHV5-10-1	A0A0J9YXX1	117 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	C10orf142	B7Z368	130 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TEX22	C9J3V5	150 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030		F6UB75	175 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGLV3-19	P01714	112 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TFF1	P04155	84 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	MIF	P14174	115 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	SS18	Q15532	418 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	HIST2H2BC	Q6DN03	193 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	HIST2H2BD	Q6DRA6	164 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	CD164L2	Q6UWJ8	174 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	GPHB5	Q86YW7	130 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	ZNRF1	Q8ND25	227 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	HES7	Q9BYE0	225 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	C14orf132	Q9NPU4	83 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	SPRR3	Q9UBC9	169 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	DOCK10	Q96BY6	2186 aa		3.86	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGHV3-64	A0A075B6Q5	118 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	IGHV3-21	A0A0B4J1V1	117 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	LHB	P01229	141 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	CRP	P02741	224 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	CD28	P10747	220 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	MAGEA5	P43359	124 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	RPL39	P62891	51 aa	Known RBP	3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030		Q1T7F1	81 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	ADAMTSL4-AS1	Q5T5F5	129 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	LINC00308	Q8TCZ7	52 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	RPL36AL	Q969Q0	106 aa	Known RBP	3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	TM2D3	Q9BRN9	247 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	ORMDL1	Q9P0S3	153 aa		3.85	□□□□□ -1.79
SMARCA2-233	ENST00000635030	LINC00474	Q9P2X8	69 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms