RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 DEFB127Q9H1M4 99 aa1.53□□□□□ -2.16
SPTAN1-216ENST00000629047 PCNX3Q9H6A9 2034 aa1.53□□□□□ -2.16
SPTAN1-216ENST00000629047 KIAA1549Q9HCM3 1950 aa1.53□□□□□ -2.16
SPTAN1-216ENST00000629047 RNF186Q9NXI6 227 aa1.53□□□□□ -2.16
SPTAN1-216ENST00000629047 MSRB1Q9NZV6 116 aa1.53□□□□□ -2.16
SPTAN1-216ENST00000629047 GOLGA4Q13439 2230 aaKnown RBP1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 GTF3C1Q12789 2109 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 LRRK1Q38SD2 2015 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 PTPRSQ13332 1948 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 IGKV1D-17A0A075B6S4 117 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 A0A087WYN8 130 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 IGHV3-21A0A0B4J1V1 117 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 IGHV1-18A0A0C4DH31 117 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 IGIPA6NJ69 53 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 EPM2AB3EWF7 344 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 SRRM5B3KS81 715 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 H7BZZ5 65 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 PRYO14603 147 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 NDUFB1O75438 58 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 IGKV1-16P04430 117 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 IGHV3-30-3P0DP02 117 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 HOXD3P31249 432 aaPredicted RBP1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 APOC4P55056 127 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 KRTAP10-3P60369 221 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 CXCL6P80162 114 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 HAMPP81172 84 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 CFHR1Q03591 330 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 FAM27E3Q08E93 113 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 DEFB133Q30KQ1 61 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 PIK3CD-AS1Q5SR53 167 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 ENHOQ6UWT2 76 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 C9orf47Q6ZRZ4 202 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 Q6ZVQ6 151 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 WDR86Q86TI4 376 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 ZNF491Q8N8L2 437 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 ZNRF1Q8ND25 227 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 CCL13Q99616 98 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 DCTN5Q9BTE1 182 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 PROK2Q9HC23 129 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 C14orf132Q9NPU4 83 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 ESM1Q9NQ30 184 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 SPRR3Q9UBC9 169 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 SHANK1Q9Y566 2161 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 EML5Q05BV3 1969 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 PCDH15Q96QU1 1955 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 SCN10AQ9Y5Y9 1956 aa1.52□□□□□ -2.17
SPTAN1-216ENST00000629047 TANC2Q9HCD6 1990 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 IGHV4OR15-8A0A075B7B6 117 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 A0A087WVE0 104 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 A0A087WW49 117 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 A0A0J9YXV3 536 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 TRBV6-5A0A0K0K1A5 114 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 IBA57-AS1B1ANH7 110 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 I3L2K1 104 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 SPRY3O43610 288 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 OXTP01178 125 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 IGKV1-17P01599 117 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 APELAP0DMC3 54 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 LOXP28300 417 aaPredicted RBP1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 RNASE4P34096 147 aaKnown RBP1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 RPL28P46779 137 aaKnown RBP1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 B3GALT5-AS1P59052 145 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 TSPEAR-AS2P59090 65 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 RPL36AP83881 106 aaKnown RBP1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 Q0VFX4 171 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 SS18Q15532 418 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 C17orf58Q2M2W7 97 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 C15orf32Q32M92 178 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 C10orf55Q5SWW7 151 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 FAM74A4Q5TZK3 123 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 PMS2CLQ68D20 193 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 SUMO4Q6EEV6 95 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 Q6ZS52 159 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 C18orf65Q6ZTR6 163 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 VMO1Q7Z5L0 202 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 Q8N6K4 173 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 CNEP1R1Q8N9A8 125 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 MDS2Q8NDY4 140 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 DEFB108BQ8NET1 73 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 TMEM254Q8TBM7 123 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 LINC00308Q8TCZ7 52 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 SAP25Q8TEE9 199 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 RPL39LQ96EH5 51 aaKnown RBP1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 C17orf77Q96MU5 243 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 LIMD2Q9BT23 127 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 LINC00574Q9H8X3 128 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 LINC00846Q9NV44 126 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 Q9UF83 564 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 SNURFQ9Y675 71 aa1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 TNRC6BQ9UPQ9 1833 aaKnown RBP1.51□□□□□ -2.17
SPTAN1-216ENST00000629047 SPAG17Q6Q759 2223 aa1.5□□□□□ -2.17
SPTAN1-216ENST00000629047 IGLV4-3A0A075B6K6 122 aa1.5□□□□□ -2.17
SPTAN1-216ENST00000629047 IGHV1OR15-1A0A075B7D0 117 aa1.5□□□□□ -2.17
SPTAN1-216ENST00000629047 IGHV3OR16-10A0A075B7F0 116 aa1.5□□□□□ -2.17
SPTAN1-216ENST00000629047 IGKV3D-20A0A0C4DH25 116 aa1.5□□□□□ -2.17
SPTAN1-216ENST00000629047 IGHV1-3A0A0C4DH29 117 aa1.5□□□□□ -2.17
SPTAN1-216ENST00000629047 IGHV7-4-1A0A0J9YVY3 117 aa1.5□□□□□ -2.17
SPTAN1-216ENST00000629047 BUB1B-PAK6H3BSN5 160 aa1.5□□□□□ -2.17
SPTAN1-216ENST00000629047 CHKB-CPT1BH3BT56 60 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms