RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 FABP4P15090 132 aa17.72■□□□□ 0.43
CAPNS1-215ENST00000628018 Q8N8P6 123 aa17.72■□□□□ 0.43
CAPNS1-215ENST00000628018 NIT2Q9NQR4 276 aa17.72■□□□□ 0.43
CAPNS1-215ENST00000628018 AP5S1Q9NUS5 200 aa17.72■□□□□ 0.43
CAPNS1-215ENST00000628018 LINC01546A6NGU7 62 aa17.71■□□□□ 0.43
CAPNS1-215ENST00000628018 DEFB4AO15263 64 aa17.71■□□□□ 0.43
CAPNS1-215ENST00000628018 CIDEAO60543 219 aa17.71■□□□□ 0.43
CAPNS1-215ENST00000628018 FAM222AQ5U5X8 452 aa17.71■□□□□ 0.43
CAPNS1-215ENST00000628018 RETNQ9HD89 108 aa17.71■□□□□ 0.43
CAPNS1-215ENST00000628018 PMCHP20382 165 aa17.7■□□□□ 0.42
CAPNS1-215ENST00000628018 FAM19A2Q8N3H0 131 aa17.7■□□□□ 0.42
CAPNS1-215ENST00000628018 PACRGQ96M98 296 aaPredicted RBP17.7■□□□□ 0.42
CAPNS1-215ENST00000628018 SMIM2Q9BVW6 85 aa17.7■□□□□ 0.42
CAPNS1-215ENST00000628018 ST20Q9HBF5 79 aa17.7■□□□□ 0.42
CAPNS1-215ENST00000628018 DKK2Q9UBU2 259 aa17.7■□□□□ 0.42
CAPNS1-215ENST00000628018 AMTP48728 403 aa17.69■□□□□ 0.42
CAPNS1-215ENST00000628018 RPL32P62910 135 aaKnown RBP17.69■□□□□ 0.42
CAPNS1-215ENST00000628018 DEFB130BP0DP73 79 aa17.68■□□□□ 0.42
CAPNS1-215ENST00000628018 DEFB130AP0DP74 79 aa17.68■□□□□ 0.42
CAPNS1-215ENST00000628018 POLR2KP53803 58 aaKnown RBP17.68■□□□□ 0.42
CAPNS1-215ENST00000628018 SBSPONQ8IVN8 264 aa17.68■□□□□ 0.42
CAPNS1-215ENST00000628018 DEFB121Q5J5C9 76 aa17.67■□□□□ 0.42
CAPNS1-215ENST00000628018 TMEM70Q9BUB7 260 aa17.67■□□□□ 0.42
CAPNS1-215ENST00000628018 IGHV1-24A0A0C4DH33 117 aa17.67■□□□□ 0.42
CAPNS1-215ENST00000628018 P0DMU3 169 aa17.67■□□□□ 0.42
CAPNS1-215ENST00000628018 FAM231AP0DMU4 169 aa17.67■□□□□ 0.42
CAPNS1-215ENST00000628018 FAM231CP0DMU5 169 aa17.67■□□□□ 0.42
CAPNS1-215ENST00000628018 PMCHL1Q16048 86 aa17.66■□□□□ 0.42
CAPNS1-215ENST00000628018 SDHAF1A6NFY7 115 aa17.65■□□□□ 0.42
CAPNS1-215ENST00000628018 AKR1D1P51857 326 aa17.65■□□□□ 0.42
CAPNS1-215ENST00000628018 OR10D4PQ8NGN7 298 aa17.64■□□□□ 0.41
CAPNS1-215ENST00000628018 Q9UF83 564 aa17.64■□□□□ 0.41
CAPNS1-215ENST00000628018 CELA1Q9UNI1 258 aa17.64■□□□□ 0.41
CAPNS1-215ENST00000628018 SPART-AS1P0CW21 52 aa17.63■□□□□ 0.41
CAPNS1-215ENST00000628018 FHL2Q14192 279 aa17.63■□□□□ 0.41
CAPNS1-215ENST00000628018 NEXN-AS1Q8NBZ9 246 aa17.63■□□□□ 0.41
CAPNS1-215ENST00000628018 DNAJC30Q96LL9 226 aa17.63■□□□□ 0.41
CAPNS1-215ENST00000628018 A0A096LNJ9 63 aa17.62■□□□□ 0.41
CAPNS1-215ENST00000628018 TRBV27A0A0K0K1C4 114 aa17.62■□□□□ 0.41
CAPNS1-215ENST00000628018 VCYO14598 125 aa17.62■□□□□ 0.41
CAPNS1-215ENST00000628018 TCAPO15273 167 aa17.62■□□□□ 0.41
CAPNS1-215ENST00000628018 SLC25A29Q8N8R3 303 aa17.62■□□□□ 0.41
CAPNS1-215ENST00000628018 K7EMI3 77 aa17.62■□□□□ 0.41
CAPNS1-215ENST00000628018 K7EQD1 137 aa17.62■□□□□ 0.41
CAPNS1-215ENST00000628018 TM2D3Q9BRN9 247 aa17.62■□□□□ 0.41
CAPNS1-215ENST00000628018 TRGV4A0A0C4DH28 118 aa17.61■□□□□ 0.41
CAPNS1-215ENST00000628018 TRBV6-4A0A1B0GX49 114 aa17.61■□□□□ 0.41
CAPNS1-215ENST00000628018 LAGE3Q14657 143 aa17.61■□□□□ 0.41
CAPNS1-215ENST00000628018 NEGR1Q7Z3B1 354 aa17.61■□□□□ 0.41
CAPNS1-215ENST00000628018 SPATA25Q9BR10 227 aa17.61■□□□□ 0.41
CAPNS1-215ENST00000628018 TNFRSF18Q9Y5U5 241 aa17.61■□□□□ 0.41
CAPNS1-215ENST00000628018 TRBV10-1A0A0K0K1A3 114 aa17.6■□□□□ 0.41
CAPNS1-215ENST00000628018 DAD1P61803 113 aa17.6■□□□□ 0.41
CAPNS1-215ENST00000628018 C11orf68Q9H3H3 251 aaKnown RBP17.6■□□□□ 0.41
CAPNS1-215ENST00000628018 TEX48A0A1B0GUV7 120 aa17.58■□□□□ 0.41
CAPNS1-215ENST00000628018 FCER1GP30273 86 aa17.58■□□□□ 0.41
CAPNS1-215ENST00000628018 MRAPQ8TCY5 172 aa17.58■□□□□ 0.41
CAPNS1-215ENST00000628018 HBDP02042 147 aa17.57■□□□□ 0.4
CAPNS1-215ENST00000628018 ORMDL2Q53FV1 153 aa17.57■□□□□ 0.4
CAPNS1-215ENST00000628018 KIR2DL4Q99706 377 aa17.57■□□□□ 0.4
CAPNS1-215ENST00000628018 I3L3M4 83 aa17.57■□□□□ 0.4
CAPNS1-215ENST00000628018 LEPROTL1O95214 131 aa17.56■□□□□ 0.4
CAPNS1-215ENST00000628018 TRBV7-3A0A075B6L6 115 aa17.55■□□□□ 0.4
CAPNS1-215ENST00000628018 RHOHQ15669 191 aa17.55■□□□□ 0.4
CAPNS1-215ENST00000628018 ZNRF2Q8NHG8 242 aa17.55■□□□□ 0.4
CAPNS1-215ENST00000628018 HHLA3Q9XRX5 114 aa17.55■□□□□ 0.4
CAPNS1-215ENST00000628018 RPL36AP83881 106 aaKnown RBP17.54■□□□□ 0.4
CAPNS1-215ENST00000628018 RPL36ALQ969Q0 106 aaKnown RBP17.54■□□□□ 0.4
CAPNS1-215ENST00000628018 TSHBP01222 138 aa17.53■□□□□ 0.4
CAPNS1-215ENST00000628018 NUDT3O95989 172 aa17.52■□□□□ 0.4
CAPNS1-215ENST00000628018 ATP5G1P05496 136 aa17.52■□□□□ 0.4
CAPNS1-215ENST00000628018 LINC00173Q6ZV60 143 aa17.52■□□□□ 0.4
CAPNS1-215ENST00000628018 DEFB104AQ8WTQ1 72 aa17.52■□□□□ 0.4
CAPNS1-215ENST00000628018 PRADC1Q9BSG0 188 aa17.52■□□□□ 0.4
CAPNS1-215ENST00000628018 A0A0J9YWU9 116 aa17.52■□□□□ 0.39
CAPNS1-215ENST00000628018 CRYBA4P53673 196 aa17.52■□□□□ 0.39
CAPNS1-215ENST00000628018 HSPB8Q9UJY1 196 aa17.52■□□□□ 0.39
CAPNS1-215ENST00000628018 BTF3P20290 206 aaKnown RBP17.51■□□□□ 0.39
CAPNS1-215ENST00000628018 UBE2D3P61077 147 aa17.51■□□□□ 0.39
CAPNS1-215ENST00000628018 UBE2D2P62837 147 aa17.51■□□□□ 0.39
CAPNS1-215ENST00000628018 C12orf74Q32Q52 190 aa17.51■□□□□ 0.39
CAPNS1-215ENST00000628018 PRO0255Q9UI72 69 aa17.51■□□□□ 0.39
CAPNS1-215ENST00000628018 LOC100131303A0A0U1RQF7 123 aa17.5■□□□□ 0.39
CAPNS1-215ENST00000628018 GAGE12JA6NER3 117 aa17.5■□□□□ 0.39
CAPNS1-215ENST00000628018 C3orf79P0CE67 100 aa17.5■□□□□ 0.39
CAPNS1-215ENST00000628018 GAGE1Q13065 139 aa17.5■□□□□ 0.39
CAPNS1-215ENST00000628018 GAGE4Q13068 117 aa17.5■□□□□ 0.39
CAPNS1-215ENST00000628018 GAGE5Q13069 117 aa17.5■□□□□ 0.39
CAPNS1-215ENST00000628018 GAGE13Q4V321 117 aa17.5■□□□□ 0.39
CAPNS1-215ENST00000628018 PYY3Q5JQD4 70 aa17.49■□□□□ 0.39
CAPNS1-215ENST00000628018 PHLDA1Q8WV24 401 aaPredicted RBP17.49■□□□□ 0.39
CAPNS1-215ENST00000628018 TENM3Q9P273 2699 aa17.49■□□□□ 0.39
CAPNS1-215ENST00000628018 KRTDAPP60985 99 aa17.48■□□□□ 0.39
CAPNS1-215ENST00000628018 JOSD1Q15040 202 aaPredicted RBP17.48■□□□□ 0.39
CAPNS1-215ENST00000628018 TOMM6Q96B49 74 aa17.48■□□□□ 0.39
CAPNS1-215ENST00000628018 ZMAT4Q9H898 229 aa17.48■□□□□ 0.39
CAPNS1-215ENST00000628018 IGHV3-38A0A0C4DH36 116 aa17.47■□□□□ 0.39
CAPNS1-215ENST00000628018 LINC00694P0DN24 101 aa17.47■□□□□ 0.39
CAPNS1-215ENST00000628018 G0S2P27469 103 aa17.47■□□□□ 0.39
CAPNS1-215ENST00000628018 DAZ4Q86SG3 579 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms