RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 Q8NAQ8 132 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 RASL10AQ92737 203 aa13.72□□□□□ -0.21
CNOT9-209ENST00000627282 DNAH7Q8WXX0 4024 aa13.71□□□□□ -0.21
CNOT9-209ENST00000627282 LINC01587Q99440 93 aa13.71□□□□□ -0.22
CNOT9-209ENST00000627282 IGHV4-28A0A0C4DH34 117 aa13.7□□□□□ -0.22
CNOT9-209ENST00000627282 PPP1R17O96001 155 aa13.7□□□□□ -0.22
CNOT9-209ENST00000627282 MIFP14174 115 aa13.7□□□□□ -0.22
CNOT9-209ENST00000627282 FCER1GP30273 86 aa13.7□□□□□ -0.22
CNOT9-209ENST00000627282 C20orf78Q9BR46 151 aa13.7□□□□□ -0.22
CNOT9-209ENST00000627282 JPT2Q9H910 190 aa13.7□□□□□ -0.22
CNOT9-209ENST00000627282 KMT2CQ8NEZ4 4911 aaKnown RBP13.7□□□□□ -0.22
CNOT9-209ENST00000627282 DEFB4AO15263 64 aa13.69□□□□□ -0.22
CNOT9-209ENST00000627282 DDTP30046 118 aa13.69□□□□□ -0.22
CNOT9-209ENST00000627282 C20orf202A1L168 122 aa13.68□□□□□ -0.22
CNOT9-209ENST00000627282 CASC10Q5T4H9 136 aa13.68□□□□□ -0.22
CNOT9-209ENST00000627282 A0A0J9YWU9 116 aa13.68□□□□□ -0.22
CNOT9-209ENST00000627282 SMIM9A6NGZ8 99 aa13.68□□□□□ -0.22
CNOT9-209ENST00000627282 AZU1P20160 251 aa13.68□□□□□ -0.22
CNOT9-209ENST00000627282 SMIM2Q9BVW6 85 aa13.68□□□□□ -0.22
CNOT9-209ENST00000627282 PAM16Q9Y3D7 125 aa13.68□□□□□ -0.22
CNOT9-209ENST00000627282 HTN1P15515 57 aa13.67□□□□□ -0.22
CNOT9-209ENST00000627282 SUMO2P61956 95 aaKnown RBP13.67□□□□□ -0.22
CNOT9-209ENST00000627282 RRN3P1Q2M238 152 aa13.67□□□□□ -0.22
CNOT9-209ENST00000627282 PTH2Q96A98 100 aa13.67□□□□□ -0.22
CNOT9-209ENST00000627282 RPL39LQ96EH5 51 aaKnown RBP13.67□□□□□ -0.22
CNOT9-209ENST00000627282 CRYGDP07320 174 aa13.66□□□□□ -0.22
CNOT9-209ENST00000627282 ZNF415Q09FC8 603 aa13.66□□□□□ -0.22
CNOT9-209ENST00000627282 ZNF876PQ49A33 203 aa13.66□□□□□ -0.22
CNOT9-209ENST00000627282 C11orf68Q9H3H3 251 aaKnown RBP13.66□□□□□ -0.22
CNOT9-209ENST00000627282 A0A087WWL8 130 aa13.65□□□□□ -0.22
CNOT9-209ENST00000627282 LAGE3Q14657 143 aa13.65□□□□□ -0.22
CNOT9-209ENST00000627282 LINC01545Q5VT33 79 aa13.65□□□□□ -0.22
CNOT9-209ENST00000627282 SUMO4Q6EEV6 95 aa13.65□□□□□ -0.22
CNOT9-209ENST00000627282 CSMD3Q7Z407 3707 aa13.65□□□□□ -0.22
CNOT9-209ENST00000627282 TRAV9-2A0A087WT02 112 aa13.64□□□□□ -0.23
CNOT9-209ENST00000627282 RPL32P62910 135 aaKnown RBP13.64□□□□□ -0.23
CNOT9-209ENST00000627282 SPATA45Q537H7 98 aa13.64□□□□□ -0.23
CNOT9-209ENST00000627282 PIK3CD-AS1Q5SR53 167 aa13.64□□□□□ -0.23
CNOT9-209ENST00000627282 ATOH7Q8N100 152 aa13.64□□□□□ -0.23
CNOT9-209ENST00000627282 K7EMI3 77 aa13.64□□□□□ -0.23
CNOT9-209ENST00000627282 IFI27L1Q96BM0 104 aa13.64□□□□□ -0.23
CNOT9-209ENST00000627282 TENM2Q9NT68 2774 aa13.63□□□□□ -0.23
CNOT9-209ENST00000627282 PLAC8L1A1L4L8 177 aa13.63□□□□□ -0.23
CNOT9-209ENST00000627282 M0R2P5 195 aa13.63□□□□□ -0.23
CNOT9-209ENST00000627282 TCAPO15273 167 aa13.63□□□□□ -0.23
CNOT9-209ENST00000627282 ZFAND6Q6FIF0 208 aa13.63□□□□□ -0.23
CNOT9-209ENST00000627282 RNASE8Q8TDE3 154 aaKnown RBP13.63□□□□□ -0.23
CNOT9-209ENST00000627282 F5H697 171 aa13.62□□□□□ -0.23
CNOT9-209ENST00000627282 EMP1P54849 157 aa13.62□□□□□ -0.23
CNOT9-209ENST00000627282 C11orf72Q8NBR9 251 aa13.62□□□□□ -0.23
CNOT9-209ENST00000627282 TMEM263Q8WUH6 116 aaKnown RBP13.62□□□□□ -0.23
CNOT9-209ENST00000627282 SPXQ9BT56 116 aa13.62□□□□□ -0.23
CNOT9-209ENST00000627282 NDUFAF3Q9BU61 184 aa13.62□□□□□ -0.23
CNOT9-209ENST00000627282 TRBV6-5A0A0K0K1A5 114 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 H0Y8G0 127 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 ORMDL2Q53FV1 153 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 FAM74A4Q5TZK3 123 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 ST20Q9HBF5 79 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 LGALS9BQ3B8N2 356 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 LGALS9CQ6DKI2 356 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 IL17DQ8TAD2 202 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 C16orf74Q96GX8 76 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 MIEN1Q9BRT3 115 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 CELA1Q9UNI1 258 aa13.61□□□□□ -0.23
CNOT9-209ENST00000627282 POLR2KP53803 58 aaKnown RBP13.6□□□□□ -0.23
CNOT9-209ENST00000627282 ZNF56Q15929 161 aa13.6□□□□□ -0.23
CNOT9-209ENST00000627282 MAJINQ3KP22 176 aa13.6□□□□□ -0.23
CNOT9-209ENST00000627282 A8MWV9 139 aa13.59□□□□□ -0.23
CNOT9-209ENST00000627282 M0QY20 66 aa13.59□□□□□ -0.23
CNOT9-209ENST00000627282 NUDT3O95989 172 aa13.58□□□□□ -0.24
CNOT9-209ENST00000627282 C14orf144Q96I85 54 aa13.58□□□□□ -0.24
CNOT9-209ENST00000627282 C18orf15Q96N68 181 aa13.58□□□□□ -0.24
CNOT9-209ENST00000627282 ATP5LO75964 103 aa13.57□□□□□ -0.24
CNOT9-209ENST00000627282 IGLC3P0DOY3 106 aa13.57□□□□□ -0.24
CNOT9-209ENST00000627282 DKK2Q9UBU2 259 aa13.57□□□□□ -0.24
CNOT9-209ENST00000627282 VCYO14598 125 aa13.57□□□□□ -0.24
CNOT9-209ENST00000627282 FAM222AQ5U5X8 452 aa13.57□□□□□ -0.24
CNOT9-209ENST00000627282 UFSP1Q6NVU6 142 aa13.57□□□□□ -0.24
CNOT9-209ENST00000627282 PMCHL2Q9BQD1 86 aa13.57□□□□□ -0.24
CNOT9-209ENST00000627282 STARD9Q9P2P6 4700 aa13.56□□□□□ -0.24
CNOT9-209ENST00000627282 NOP10Q9NPE3 64 aaKnown RBP13.56□□□□□ -0.24
CNOT9-209ENST00000627282 C11orf45Q8TAV5 145 aa13.55□□□□□ -0.24
CNOT9-209ENST00000627282 TOMM6Q96B49 74 aa13.55□□□□□ -0.24
CNOT9-209ENST00000627282 UQCR10Q9UDW1 63 aa13.55□□□□□ -0.24
CNOT9-209ENST00000627282 hDV102S1A0JD36 115 aa13.54□□□□□ -0.24
CNOT9-209ENST00000627282 SDHAF1A6NFY7 115 aa13.54□□□□□ -0.24
CNOT9-209ENST00000627282 HSBP1L1C9JCN9 74 aa13.54□□□□□ -0.24
CNOT9-209ENST00000627282 SPART-AS1P0CW21 52 aa13.54□□□□□ -0.24
CNOT9-209ENST00000627282 NANOS2P60321 138 aaKnown RBP13.54□□□□□ -0.24
CNOT9-209ENST00000627282 TRBV27A0A0K0K1C4 114 aa13.53□□□□□ -0.24
CNOT9-209ENST00000627282 H7C1H1 209 aa13.53□□□□□ -0.24
CNOT9-209ENST00000627282 RS1O15537 224 aa13.53□□□□□ -0.24
CNOT9-209ENST00000627282 DAZ2Q13117 558 aaKnown RBP13.53□□□□□ -0.24
CNOT9-209ENST00000627282 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
CNOT9-209ENST00000627282 MRPL16Q9NX20 251 aaKnown RBP13.53□□□□□ -0.24
CNOT9-209ENST00000627282 LYRM9A8MSI8 78 aa13.53□□□□□ -0.24
CNOT9-209ENST00000627282 G0S2P27469 103 aa13.53□□□□□ -0.24
CNOT9-209ENST00000627282 C12orf74Q32Q52 190 aa13.53□□□□□ -0.24
CNOT9-209ENST00000627282 NEGR1Q7Z3B1 354 aa13.53□□□□□ -0.24
CNOT9-209ENST00000627282 RHODO00212 210 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms