RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 EDA2RQ9HAV5 297 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 CENPVL3A0A0U1RRI6 287 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 IGIPA6NJ69 53 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 VCYO14598 125 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 OVOL1O14753 267 aa10.41□□□□□ -0.74
UBE3A-209ENST00000625778 VPS13CQ709C8 3753 aa10.4□□□□□ -0.74
UBE3A-209ENST00000625778 NACAE9PAV3 2078 aa10.4□□□□□ -0.74
UBE3A-209ENST00000625778 FOXC1Q12948 553 aa10.4□□□□□ -0.74
UBE3A-209ENST00000625778 ITLN2Q8WWU7 325 aaPredicted RBP10.4□□□□□ -0.74
UBE3A-209ENST00000625778 KLK9Q9UKQ9 250 aa10.4□□□□□ -0.74
UBE3A-209ENST00000625778 PAPPA-AS1Q5QFB9 102 aa10.4□□□□□ -0.74
UBE3A-209ENST00000625778 RHPN1-AS1Q9BWJ2 59 aa10.4□□□□□ -0.74
UBE3A-209ENST00000625778 SIRPDQ9H106 197 aa10.4□□□□□ -0.74
UBE3A-209ENST00000625778 Q6ZSV7 163 aa10.39□□□□□ -0.75
UBE3A-209ENST00000625778 BPESC1Q9GZL8 116 aa10.39□□□□□ -0.75
UBE3A-209ENST00000625778 PPP1R17O96001 155 aa10.39□□□□□ -0.75
UBE3A-209ENST00000625778 Q8N1Y9 231 aa10.39□□□□□ -0.75
UBE3A-209ENST00000625778 CHD8Q9HCK8 2581 aa10.38□□□□□ -0.75
UBE3A-209ENST00000625778 UBE2E1P51965 193 aa10.38□□□□□ -0.75
UBE3A-209ENST00000625778 C5orf56Q8N8D9 126 aa10.38□□□□□ -0.75
UBE3A-209ENST00000625778 MDFICQ9P1T7 246 aa10.38□□□□□ -0.75
UBE3A-209ENST00000625778 NPFFO15130 113 aa10.38□□□□□ -0.75
UBE3A-209ENST00000625778 IGHV3-33P01772 117 aa10.38□□□□□ -0.75
UBE3A-209ENST00000625778 C9orf153Q5TBE3 101 aa10.38□□□□□ -0.75
UBE3A-209ENST00000625778 CEMP1Q6PRD7 247 aaPredicted RBP10.38□□□□□ -0.75
UBE3A-209ENST00000625778 U3KQE9 123 aa10.38□□□□□ -0.75
UBE3A-209ENST00000625778 EIF4EBP3O60516 100 aaPredicted RBP10.37□□□□□ -0.75
UBE3A-209ENST00000625778 HIVEP3Q5T1R4 2406 aa10.37□□□□□ -0.75
UBE3A-209ENST00000625778 TRAV8-3A0A0A6YYJ7 113 aa10.37□□□□□ -0.75
UBE3A-209ENST00000625778 A8MZ25 164 aa10.37□□□□□ -0.75
UBE3A-209ENST00000625778 CSDC2Q9Y534 153 aaKnown RBP10.37□□□□□ -0.75
UBE3A-209ENST00000625778 A0A0U1RRA0 63 aa10.36□□□□□ -0.75
UBE3A-209ENST00000625778 POLR2KP53803 58 aaKnown RBP10.36□□□□□ -0.75
UBE3A-209ENST00000625778 LINC00315P59091 139 aa10.36□□□□□ -0.75
UBE3A-209ENST00000625778 VCX2Q9H322 139 aa10.36□□□□□ -0.75
UBE3A-209ENST00000625778 LENEPQ9Y5L5 61 aa10.36□□□□□ -0.75
UBE3A-209ENST00000625778 FAM236AA0A1B0GUQ0 79 aa10.36□□□□□ -0.75
UBE3A-209ENST00000625778 FAM236BA0A1B0GV22 79 aa10.36□□□□□ -0.75
UBE3A-209ENST00000625778 A0A1W2PPR1 153 aa10.36□□□□□ -0.75
UBE3A-209ENST00000625778 ZNF876PQ49A33 203 aa10.36□□□□□ -0.75
UBE3A-209ENST00000625778 TMEM141Q96I45 108 aa10.36□□□□□ -0.75
UBE3A-209ENST00000625778 IGHV1-69DA0A0B4J2H0 117 aa10.35□□□□□ -0.75
UBE3A-209ENST00000625778 LINC01620Q4KN68 170 aa10.35□□□□□ -0.75
UBE3A-209ENST00000625778 DAND5Q8N907 189 aa10.35□□□□□ -0.75
UBE3A-209ENST00000625778 CRYBG3Q68DQ2 2970 aa10.35□□□□□ -0.75
UBE3A-209ENST00000625778 P0DMU3 169 aa10.35□□□□□ -0.75
UBE3A-209ENST00000625778 FAM231AP0DMU4 169 aa10.35□□□□□ -0.75
UBE3A-209ENST00000625778 FAM231CP0DMU5 169 aa10.35□□□□□ -0.75
UBE3A-209ENST00000625778 ATXN8Q156A1 80 aa10.34□□□□□ -0.75
UBE3A-209ENST00000625778 SPINK13Q1W4C9 94 aa10.34□□□□□ -0.75
UBE3A-209ENST00000625778 C2orf82Q6UX34 121 aa10.34□□□□□ -0.75
UBE3A-209ENST00000625778 TMEM263Q8WUH6 116 aaKnown RBP10.34□□□□□ -0.75
UBE3A-209ENST00000625778 CLEC2BQ92478 149 aa10.34□□□□□ -0.75
UBE3A-209ENST00000625778 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
UBE3A-209ENST00000625778 BLCAPP62952 87 aa10.34□□□□□ -0.75
UBE3A-209ENST00000625778 AMELXQ99217 191 aa10.34□□□□□ -0.75
UBE3A-209ENST00000625778 MOB4Q9Y3A3 225 aa10.34□□□□□ -0.75
UBE3A-209ENST00000625778 TRIAP1O43715 76 aa10.33□□□□□ -0.76
UBE3A-209ENST00000625778 ZNF22P17026 224 aaPredicted RBP10.33□□□□□ -0.76
UBE3A-209ENST00000625778 TIMM17AQ99595 171 aa10.33□□□□□ -0.76
UBE3A-209ENST00000625778 TRGV11A0A075B6L2 103 aa10.33□□□□□ -0.76
UBE3A-209ENST00000625778 KNCNA6PVL3 124 aa10.33□□□□□ -0.76
UBE3A-209ENST00000625778 CD28P10747 220 aa10.33□□□□□ -0.76
UBE3A-209ENST00000625778 SOCS3O14543 225 aa10.33□□□□□ -0.76
UBE3A-209ENST00000625778 TMEM223A0PJW6 202 aa10.32□□□□□ -0.76
UBE3A-209ENST00000625778 NDUFA4O00483 81 aa10.32□□□□□ -0.76
UBE3A-209ENST00000625778 LEPROTO15243 131 aa10.32□□□□□ -0.76
UBE3A-209ENST00000625778 PRM2P04554 102 aa10.32□□□□□ -0.76
UBE3A-209ENST00000625778 C11orf71Q6IPW1 123 aa10.32□□□□□ -0.76
UBE3A-209ENST00000625778 PRRC2AP48634 2157 aaKnown RBP10.32□□□□□ -0.76
UBE3A-209ENST00000625778 H3BMM0 161 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 ADORA2A-AS1P86434 159 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 UBE2WQ96B02 151 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 DUX5Q96PT3 197 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 USP9YO00507 2555 aaPredicted RBP10.31□□□□□ -0.76
UBE3A-209ENST00000625778 A0A0J9YXY3 114 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 FAM223BA6NKX1 122 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 SBSPONQ8IVN8 264 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 FAM223AQ8IWN6 122 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 H3BUX3 64 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 PROK1P58294 105 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 FAM19A5Q7Z5A7 132 aaPredicted RBP10.31□□□□□ -0.76
UBE3A-209ENST00000625778 TIMM21Q9BVV7 248 aa10.31□□□□□ -0.76
UBE3A-209ENST00000625778 IGHV4OR15-8A0A075B7B6 117 aa10.3□□□□□ -0.76
UBE3A-209ENST00000625778 A0A087WW49 117 aa10.3□□□□□ -0.76
UBE3A-209ENST00000625778 ODF3Q96PU9 254 aa10.3□□□□□ -0.76
UBE3A-209ENST00000625778 IGHV3-30-3P0DP02 117 aa10.3□□□□□ -0.76
UBE3A-209ENST00000625778 ZNF625Q96I27 306 aaPredicted RBP10.3□□□□□ -0.76
UBE3A-209ENST00000625778 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.29□□□□□ -0.76
UBE3A-209ENST00000625778 TRBV27A0A0K0K1C4 114 aa10.29□□□□□ -0.76
UBE3A-209ENST00000625778 M0QY20 66 aa10.29□□□□□ -0.76
UBE3A-209ENST00000625778 DAZ1Q9NQZ3 744 aaKnown RBP10.29□□□□□ -0.76
UBE3A-209ENST00000625778 M0R2P5 195 aa10.28□□□□□ -0.76
UBE3A-209ENST00000625778 C5orf47Q569G3 176 aa10.28□□□□□ -0.76
UBE3A-209ENST00000625778 ADAMTSL4-AS1Q5T5F5 129 aa10.28□□□□□ -0.76
UBE3A-209ENST00000625778 SPTBN4Q9H254 2564 aa10.28□□□□□ -0.76
UBE3A-209ENST00000625778 IGLV4-3A0A075B6K6 122 aa10.28□□□□□ -0.76
UBE3A-209ENST00000625778 IGHV3-38A0A0C4DH36 116 aa10.28□□□□□ -0.76
UBE3A-209ENST00000625778 MED14OSP0DP75 135 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms