RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 FAM231AP0DMU4 169 aa13.82□□□□□ -0.2
PDLIM2-221ENST00000622702 FAM231CP0DMU5 169 aa13.82□□□□□ -0.2
PDLIM2-221ENST00000622702 GYPEP15421 78 aa13.82□□□□□ -0.2
PDLIM2-221ENST00000622702 C15orf53Q8NAA6 179 aa13.82□□□□□ -0.2
PDLIM2-221ENST00000622702 Q9UF83 564 aa13.82□□□□□ -0.2
PDLIM2-221ENST00000622702 LOC100131303A0A0U1RQF7 123 aa13.81□□□□□ -0.2
PDLIM2-221ENST00000622702 RYR3Q15413 4870 aa13.81□□□□□ -0.2
PDLIM2-221ENST00000622702 COLCA2A8K830 154 aa13.8□□□□□ -0.2
PDLIM2-221ENST00000622702 NEXN-AS1Q8NBZ9 246 aa13.8□□□□□ -0.2
PDLIM2-221ENST00000622702 ICOSQ9Y6W8 199 aa13.8□□□□□ -0.2
PDLIM2-221ENST00000622702 PPBPP02775 128 aa13.8□□□□□ -0.2
PDLIM2-221ENST00000622702 LINC00694P0DN24 101 aa13.8□□□□□ -0.2
PDLIM2-221ENST00000622702 TCTAP57738 103 aa13.8□□□□□ -0.2
PDLIM2-221ENST00000622702 MRPL23Q16540 153 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-221ENST00000622702 DNAJC30Q96LL9 226 aa13.8□□□□□ -0.2
PDLIM2-221ENST00000622702 NIT2Q9NQR4 276 aa13.8□□□□□ -0.2
PDLIM2-221ENST00000622702 TRBV7-3A0A075B6L6 115 aa13.79□□□□□ -0.2
PDLIM2-221ENST00000622702 A0A096LPF7 62 aa13.79□□□□□ -0.2
PDLIM2-221ENST00000622702 GAS8-AS1O95177 125 aa13.79□□□□□ -0.2
PDLIM2-221ENST00000622702 APCSP02743 223 aa13.79□□□□□ -0.2
PDLIM2-221ENST00000622702 CKS2P33552 79 aa13.79□□□□□ -0.2
PDLIM2-221ENST00000622702 RPL36AP83881 106 aaKnown RBP13.79□□□□□ -0.2
PDLIM2-221ENST00000622702 RPL36ALQ969Q0 106 aaKnown RBP13.79□□□□□ -0.2
PDLIM2-221ENST00000622702 APLNQ9ULZ1 77 aa13.79□□□□□ -0.2
PDLIM2-221ENST00000622702 D6R8Y8 96 aa13.78□□□□□ -0.2
PDLIM2-221ENST00000622702 SMKR1H3BMG3 65 aa13.78□□□□□ -0.2
PDLIM2-221ENST00000622702 NCR2O95944 276 aa13.78□□□□□ -0.2
PDLIM2-221ENST00000622702 PPP1R17O96001 155 aa13.78□□□□□ -0.2
PDLIM2-221ENST00000622702 GAGE12JA6NER3 117 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 NUDT3O95989 172 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 RPS10P46783 165 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 GAGE1Q13065 139 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 GAGE4Q13068 117 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 GAGE5Q13069 117 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 GAGE13Q4V321 117 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 SH2D6Q7Z4S9 175 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 ORMDL3Q8N138 153 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 NRACQ8N912 160 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 ZNRF2Q8NHG8 242 aa13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 RPL39LQ96EH5 51 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 MRPL18Q9H0U6 180 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-221ENST00000622702 TRBV6-5A0A0K0K1A5 114 aa13.76□□□□□ -0.21
PDLIM2-221ENST00000622702 SRIP30626 198 aa13.76□□□□□ -0.21
PDLIM2-221ENST00000622702 OR10J3Q5JRS4 329 aa13.76□□□□□ -0.21
PDLIM2-221ENST00000622702 LINC00476Q8WZB0 136 aa13.76□□□□□ -0.21
PDLIM2-221ENST00000622702 TRAPPC1Q9Y5R8 145 aa13.76□□□□□ -0.21
PDLIM2-221ENST00000622702 TNFRSF18Q9Y5U5 241 aa13.76□□□□□ -0.21
PDLIM2-221ENST00000622702 RYR2Q92736 4967 aa13.75□□□□□ -0.21
PDLIM2-221ENST00000622702 UBE2D3P61077 147 aa13.75□□□□□ -0.21
PDLIM2-221ENST00000622702 UBE2D2P62837 147 aa13.75□□□□□ -0.21
PDLIM2-221ENST00000622702 VPS13DQ5THJ4 4388 aa13.74□□□□□ -0.21
PDLIM2-221ENST00000622702 PHOX2AO14813 284 aa13.74□□□□□ -0.21
PDLIM2-221ENST00000622702 LY6G6CO95867 125 aa13.74□□□□□ -0.21
PDLIM2-221ENST00000622702 RAB5AP20339 215 aa13.74□□□□□ -0.21
PDLIM2-221ENST00000622702 FABP9Q0Z7S8 132 aa13.74□□□□□ -0.21
PDLIM2-221ENST00000622702 NEGR1Q7Z3B1 354 aa13.74□□□□□ -0.21
PDLIM2-221ENST00000622702 LAMTOR2Q9Y2Q5 125 aa13.74□□□□□ -0.21
PDLIM2-221ENST00000622702 KIAA1644Q3SXP7 199 aa13.74□□□□□ -0.21
PDLIM2-221ENST00000622702 PRELID3AQ96N28 172 aa13.74□□□□□ -0.21
PDLIM2-221ENST00000622702 TNFRSF6BO95407 300 aa13.73□□□□□ -0.21
PDLIM2-221ENST00000622702 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
PDLIM2-221ENST00000622702 ST20Q9HBF5 79 aa13.73□□□□□ -0.21
PDLIM2-221ENST00000622702 HYDINQ4G0P3 5121 aa13.72□□□□□ -0.21
PDLIM2-221ENST00000622702 NPYP01303 97 aa13.72□□□□□ -0.21
PDLIM2-221ENST00000622702 DAZ4Q86SG3 579 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-221ENST00000622702 C20orf78Q9BR46 151 aa13.72□□□□□ -0.21
PDLIM2-221ENST00000622702 DAZ3Q9NR90 486 aaKnown RBP13.72□□□□□ -0.21
PDLIM2-221ENST00000622702 SDHAF1A6NFY7 115 aa13.71□□□□□ -0.21
PDLIM2-221ENST00000622702 SUMO2P61956 95 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-221ENST00000622702 LGALS9CQ6DKI2 356 aa13.71□□□□□ -0.21
PDLIM2-221ENST00000622702 TMEM70Q9BUB7 260 aa13.71□□□□□ -0.21
PDLIM2-221ENST00000622702 POLR2KP53803 58 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-221ENST00000622702 TIRAPP58753 221 aa13.7□□□□□ -0.22
PDLIM2-221ENST00000622702 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-221ENST00000622702 ALKBH7Q9BT30 221 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-221ENST00000622702 RPL32P62910 135 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-221ENST00000622702 GTSF1LQ9H1H1 148 aa13.69□□□□□ -0.22
PDLIM2-221ENST00000622702 TRBV27A0A0K0K1C4 114 aa13.68□□□□□ -0.22
PDLIM2-221ENST00000622702 PRSS47A8MTI9 375 aa13.68□□□□□ -0.22
PDLIM2-221ENST00000622702 LYPD5Q6UWN5 251 aa13.68□□□□□ -0.22
PDLIM2-221ENST00000622702 IGHV3-38A0A0C4DH36 116 aa13.67□□□□□ -0.22
PDLIM2-221ENST00000622702 TRGC2P03986 189 aa13.67□□□□□ -0.22
PDLIM2-221ENST00000622702 ESRGQ1W209 222 aa13.67□□□□□ -0.22
PDLIM2-221ENST00000622702 VCYO14598 125 aa13.67□□□□□ -0.22
PDLIM2-221ENST00000622702 I3L3M4 83 aa13.66□□□□□ -0.22
PDLIM2-221ENST00000622702 CCL18P55774 89 aa13.66□□□□□ -0.22
PDLIM2-221ENST00000622702 TMEM97Q5BJF2 176 aa13.66□□□□□ -0.22
PDLIM2-221ENST00000622702 SMIM2Q9BVW6 85 aa13.66□□□□□ -0.22
PDLIM2-221ENST00000622702 MAP1LC3AQ9H492 121 aa13.66□□□□□ -0.22
PDLIM2-221ENST00000622702 PMCHP20382 165 aa13.64□□□□□ -0.23
PDLIM2-221ENST00000622702 COTL1Q14019 142 aa13.64□□□□□ -0.23
PDLIM2-221ENST00000622702 LELP1Q5T871 98 aa13.63□□□□□ -0.23
PDLIM2-221ENST00000622702 NTM-AS1Q6ZSK4 140 aa13.63□□□□□ -0.23
PDLIM2-221ENST00000622702 LINC00588Q9Y4M8 146 aa13.63□□□□□ -0.23
PDLIM2-221ENST00000622702 KMT2AQ03164 3969 aa13.63□□□□□ -0.23
PDLIM2-221ENST00000622702 IGLV2-18A0A075B6J9 118 aa13.62□□□□□ -0.23
PDLIM2-221ENST00000622702 TRBV6-8A0A0A6YYG3 113 aa13.62□□□□□ -0.23
PDLIM2-221ENST00000622702 MRPS16Q9Y3D3 137 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-221ENST00000622702 LOC389332A0A1B0GUA5 103 aa13.61□□□□□ -0.23
PDLIM2-221ENST00000622702 TSHBP01222 138 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms