RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ARMS2P0C7Q2 107 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 LINC00614P0C842 121 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 SPINK13Q1W4C9 94 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 COL5A1-AS1Q5SY13 56 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 Q6ZN92 141 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 ZNF493Q6ZR52 646 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 TMEM70Q9BUB7 260 aa5.47□□□□□ -1.53
CLK1-215ENST00000621181 NPSP0C0P6 89 aa5.46□□□□□ -1.53
CLK1-215ENST00000621181 HTN1P15515 57 aa5.46□□□□□ -1.53
CLK1-215ENST00000621181 TTC32Q5I0X7 151 aa5.46□□□□□ -1.53
CLK1-215ENST00000621181 C20orf173Q96LM9 149 aa5.46□□□□□ -1.53
CLK1-215ENST00000621181 Q9H8V8 135 aa5.46□□□□□ -1.53
CLK1-215ENST00000621181 DNAH17Q9UFH2 4485 aa5.46□□□□□ -1.54
CLK1-215ENST00000621181 SERTM2A0A1B0GWG4 89 aa5.46□□□□□ -1.54
CLK1-215ENST00000621181 EPM2AB3EWF7 344 aa5.46□□□□□ -1.54
CLK1-215ENST00000621181 HNRNPA3P51991 378 aaKnown RBP5.46□□□□□ -1.54
CLK1-215ENST00000621181 KRTAP10-2P60368 255 aa5.46□□□□□ -1.54
CLK1-215ENST00000621181 RIGQ13278 110 aa5.46□□□□□ -1.54
CLK1-215ENST00000621181 Q6AWC8 147 aa5.46□□□□□ -1.54
CLK1-215ENST00000621181 AMTNQ6UX39 209 aa5.46□□□□□ -1.54
CLK1-215ENST00000621181 C8orf49Q96NF6 230 aa5.46□□□□□ -1.54
CLK1-215ENST00000621181 ST20Q9HBF5 79 aa5.46□□□□□ -1.54
CLK1-215ENST00000621181 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
CLK1-215ENST00000621181 TRAV12-2A0A075B6T6 113 aa5.45□□□□□ -1.54
CLK1-215ENST00000621181 A0A096LNJ9 63 aa5.45□□□□□ -1.54
CLK1-215ENST00000621181 CBY3A6NI87 242 aa5.45□□□□□ -1.54
CLK1-215ENST00000621181 A8MTW9 85 aa5.45□□□□□ -1.54
CLK1-215ENST00000621181 DUSP14O95147 198 aaKnown RBP5.45□□□□□ -1.54
CLK1-215ENST00000621181 ZNF138P52744 262 aa5.45□□□□□ -1.54
CLK1-215ENST00000621181 LINC01545Q5VT33 79 aa5.45□□□□□ -1.54
CLK1-215ENST00000621181 PET117Q6UWS5 81 aa5.45□□□□□ -1.54
CLK1-215ENST00000621181 PLAC8L1A1L4L8 177 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 K7EQM0 130 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 SH2D1AO60880 128 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 LEPROTL1O95214 131 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 PRB4P10163 310 aaPredicted RBP5.44□□□□□ -1.54
CLK1-215ENST00000621181 AZU1P20160 251 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 XP32Q5T750 250 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 ORAOV1Q8WV07 137 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 LINC01587Q99440 93 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 KRTAP1-5Q9BYS1 174 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 TIMM8BQ9Y5J9 83 aaPredicted RBP5.44□□□□□ -1.54
CLK1-215ENST00000621181 DYNC1H1Q14204 4646 aaKnown RBP5.44□□□□□ -1.54
CLK1-215ENST00000621181 FBLL1A6NHQ2 334 aaKnown RBP5.44□□□□□ -1.54
CLK1-215ENST00000621181 IGLC6P0CF74 106 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 RPL7P18124 248 aaKnown RBP5.44□□□□□ -1.54
CLK1-215ENST00000621181 ZNF80P51504 273 aaPredicted RBP5.44□□□□□ -1.54
CLK1-215ENST00000621181 BATFQ16520 125 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 FAM104BQ5XKR9 115 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 S100A7AQ86SG5 101 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 RNF182Q8N6D2 247 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 ZNF738Q8NE65 137 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 C16orf74Q96GX8 76 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 CNFNQ9BYD5 112 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 PPP1R14DQ9NXH3 145 aa5.44□□□□□ -1.54
CLK1-215ENST00000621181 IGKV2-40A0A087WW87 121 aaPredicted RBP5.43□□□□□ -1.54
CLK1-215ENST00000621181 A0A087X0K7 114 aa5.43□□□□□ -1.54
CLK1-215ENST00000621181 hDV102S1A0JD36 115 aa5.43□□□□□ -1.54
CLK1-215ENST00000621181 IGKV2D-40P01614 121 aaPredicted RBP5.43□□□□□ -1.54
CLK1-215ENST00000621181 S100A7P31151 101 aa5.43□□□□□ -1.54
CLK1-215ENST00000621181 IGFL4Q6B9Z1 124 aa5.43□□□□□ -1.54
CLK1-215ENST00000621181 LYZL1Q6UWQ5 148 aa5.43□□□□□ -1.54
CLK1-215ENST00000621181 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.43□□□□□ -1.54
CLK1-215ENST00000621181 OR10J6PQ8NGY7 276 aa5.43□□□□□ -1.54
CLK1-215ENST00000621181 VGLL1Q99990 258 aa5.43□□□□□ -1.54
CLK1-215ENST00000621181 NOP10Q9NPE3 64 aaKnown RBP5.43□□□□□ -1.54
CLK1-215ENST00000621181 TP73-AS1Q9UF72 201 aa5.43□□□□□ -1.54
CLK1-215ENST00000621181 TRAV26-1A0A087WT03 109 aa5.42□□□□□ -1.54
CLK1-215ENST00000621181 A0A0J9YY99 117 aa5.42□□□□□ -1.54
CLK1-215ENST00000621181 LINC01546A6NGU7 62 aa5.42□□□□□ -1.54
CLK1-215ENST00000621181 NCR2O95944 276 aa5.42□□□□□ -1.54
CLK1-215ENST00000621181 HINT1P49773 126 aaPredicted RBP5.42□□□□□ -1.54
CLK1-215ENST00000621181 HIST1H1AQ02539 215 aaPredicted RBP5.42□□□□□ -1.54
CLK1-215ENST00000621181 SAPCD1Q5SSQ6 148 aa5.42□□□□□ -1.54
CLK1-215ENST00000621181 TMEM191AQ9H0A3 160 aa5.42□□□□□ -1.54
CLK1-215ENST00000621181 AAMDCQ9H7C9 122 aa5.42□□□□□ -1.54
CLK1-215ENST00000621181 AP5S1Q9NUS5 200 aa5.42□□□□□ -1.54
CLK1-215ENST00000621181 HSPB8Q9UJY1 196 aa5.42□□□□□ -1.54
CLK1-215ENST00000621181 INAFM2P0DMQ5 153 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 CSN1S1P47710 185 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 MRPL51Q4U2R6 128 aaKnown RBP5.41□□□□□ -1.54
CLK1-215ENST00000621181 TMEM263Q8WUH6 116 aaKnown RBP5.41□□□□□ -1.54
CLK1-215ENST00000621181 RNF185Q96GF1 192 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 MAP1LC3CQ9BXW4 147 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 COX11Q9Y6N1 276 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 TRAV8-2A0A0B4J237 113 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 PRAC2D3DTV9 90 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 D6R8Y8 96 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 CT45A10P0DMU9 189 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 IFI27P40305 119 aaPredicted RBP5.41□□□□□ -1.54
CLK1-215ENST00000621181 CDKN1BP46527 198 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 RPS20P60866 119 aaKnown RBP5.41□□□□□ -1.54
CLK1-215ENST00000621181 Q6ZVH6 145 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 AMN1Q8IY45 258 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 OR10AG1Q8NH19 301 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 RNASE8Q8TDE3 154 aaKnown RBP5.41□□□□□ -1.54
CLK1-215ENST00000621181 UPK3BQ9BT76 320 aa5.41□□□□□ -1.54
CLK1-215ENST00000621181 HERC1Q15751 4861 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 FLG2Q5D862 2391 aaPredicted RBP5.4□□□□□ -1.54
CLK1-215ENST00000621181 RBAKDNA6NC62 111 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms